Os04g0196500
| Gene Name |
Os04g0196500 |
|---|---|
| Description |
Reverse transcriptase, RNA-dependent DNA polymerase family protein |
| Version |
NM_001186853.1 GI:297722836 GeneID:9266637 |
| Length |
3873 bp |
| Definition |
Oryza sativa Japonica Group Os04g0196500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:6579330..6583202 |
| Sequence Coding Region |
6579330..6580362,6580576..6581195,6582138..6583202 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:6579330..6583202 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:6579330..6583202 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcggatcggcggcctcgccaacaaccttcgcaccttaggtgataatatcactgaagctgaggtcgttcagaaattgttgcaggttgtcccagaacatctccagcaaatagccatctcgattgagaccttgctcgacgtcaatgagctgtctctcgaggaggttactgggcgtctgcgctccgtcgagcaacgcaagcagtgcaagactgcggcggcatcgagtcgggtcgacgccaatggccgtctcctcttcaccgaggaagaatggctggcgaaattccgcaaggcggcctctctgcaagacgccgctcactcctccagcggcaacggcgaccgccggggtcgagggcgtgggaagaaggacgatggagccccgaaggaggcccagcccaagccagccaacccgggaggccgtaacccgggaaattgcaagaattgcggcaagaggggacattgggccaaagactgtcgcagcaagcccaaggcccagcaagcttacgtagcccaggaggaggacgaagagcctgctctgctcctggccaaggtgcagctggatccgccgcgtcctcgcgtcgctgcaccgacaaacgtcgtctcgccaccgagcgcgccgagggcgccgtcgccgattggcgaacttgccgtggtcgaggccaaggtcttcgcgcagctagacgacggtggcgaacatgatccggcgatgtggatcctggatactggcgcaaccaaccatatgaccgggtcccgctccgctttcgccgagctcgacacggcggtcaccggcactgtcaggtttggcgacggctcggtggttcgcatcgagggccgcgtcaccgtcctgttctcctgcaggttcggggaacaccgcggcatcgccggggtctactacatcccgcggctcacggcgaacatcgtcagccttggacagctggatcgttccggcagcaaggtactgattcatcacggcatcctgcacgtgtgggatcctcgagggcacctactcgtccgtgtccgacgctccgacgactgcctctacaccatcaagctggacatcgaccgtccgctcgagccgttcaccgtcgaacaggtggtgacgaccaccatcgggacggcacctgcttcgtcgccgactccaccctcgccaccatcgccggctccgtcggcccccacgacaccggcacctccgtcgcctccgtcgccggaggcggttgagtttgtcacgccgcctacccaagattccatcctggacgccgacgcagatgacgacgtcgtgcctcgctaccgcctggtggataacctgctggggaatgcctcaccgcccggacacgctccgcgggtgctggaacagctcgagctccatgttgtgagcgccgacgaacctgcttcactggctgaggctgaggcggatccaagctggcgtggcgccatgcaagacgagcttaacgcgatcgtcgacaacgacacttggtcgctcactgacctaccccatggccaccgtgcaattgggctaaaatgggtctacaagctgaaacgtgacgaacagggggcgatcgtgcgctacaaggcgcgcctcgtcgctaaggggtacgtccagcgacagggggtggacttcgacgaggtcttcgcacttgtcgcccggctggaatcggtgcgcctccttctcgccgtcgccgcgcaccaaggcagctccgagcatggtgtgtacacacgcaccaggggaggaagacgactgatggtgggcgtctacgtcgatgacctcatcatcaccggcgatcacgacgacgagatccgcagcttcaagggagagatgatgaagctcttcaagatgagtgatttgggggcactcagatactacctcggcatcgaggttacccaggacagtgatgggatcacgctggggcaagccgcatatgccggcaagattcttgagaaggcaggactcaaggactgcaatccctgtcagactcctatggaggtacgtttgaaattgagaaagggttcagattttccgcttgtggatgctacactgtatcgcagcttggttgggagtctgcgctatctcgtcaacacgcgacccgacctggcattctctgttgggtatgtcagtcgcttcatggagtcacccagggaagatcatctcgctgccgttcggcgcatactgcgctatgtggcaggcactcgctgctggggaattcgatttggcccaggtgcacggtgcgctttgccaatgctggttggttactctgacagtgatctggctggcgatccagatgagcgaaagagcacgtccggccagattttcttcatcaatggcgggcctgtcacttggcagtcctccaagcagaaggtggtggcattgtcttcctgtgaggccgagtacatcgccgcagccgccgcaacatgtcaaggagtatggctcgcgcggctgttagcggaggtgctgggcgacgagatcaccgcaccgctgctgaaggtggacaaccagtccacaatatcattgataaaaaatccagtgcatcatgaccggagtaagcatatcgatgtcaaatatcattatatccgggagtgtgcagaaaagaaactgatcgaaatgatgttcgtgggaactgcggagcagctcggtgatatattcaccaaatctctgggcagaaccaggtttcaggagcttcgttcaaagatcggtgtctgttctcttgacaagagcagtcagacttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MRIGGLANNLRTLGDNITEAEVVQKLLQVVPEHLQQIAISIETL LDVNELSLEEVTGRLRSVEQRKQCKTAAASSRVDANGRLLFTEEEWLAKFRKAASLQD AAHSSSGNGDRRGRGRGKKDDGAPKEAQPKPANPGGRNPGNCKNCGKRGHWAKDCRSK PKAQQAYVAQEEDEEPALLLAKVQLDPPRPRVAAPTNVVSPPSAPRAPSPIGELAVVE AKVFAQLDDGGEHDPAMWILDTGATNHMTGSRSAFAELDTAVTGTVRFGDGSVVRIEG RVTVLFSCRFGEHRGIAGVYYIPRLTANIVSLGQLDRSGSKVLIHHGILHVWDPRGHL LVRVRRSDDCLYTIKLDIDRPLEPFTVEQVVTTTIGTAPASSPTPPSPPSPAPSAPTT PAPPSPPSPEAVEFVTPPTQDSILDADADDDVVPRYRLVDNLLGNASPPGHAPRVLEQ LELHVVSADEPASLAEAEADPSWRGAMQDELNAIVDNDTWSLTDLPHGHRAIGLKWVY KLKRDEQGAIVRYKARLVAKGYVQRQGVDFDEVFALVARLESVRLLLAVAAHQGSSEH GVYTRTRGGRRLMVGVYVDDLIITGDHDDEIRSFKGEMMKLFKMSDLGALRYYLGIEV TQDSDGITLGQAAYAGKILEKAGLKDCNPCQTPMEVRLKLRKGSDFPLVDATLYRSLV GSLRYLVNTRPDLAFSVGYVSRFMESPREDHLAAVRRILRYVAGTRCWGIRFGPGARC ALPMLVGYSDSDLAGDPDERKSTSGQIFFINGGPVTWQSSKQKVVALSSCEAEYIAAA AATCQGVWLARLLAEVLGDEITAPLLKVDNQSTISLIKNPVHHDRSKHIDVKYHYIRE CAEKKLIEMMFVGTAEQLGDIFTKSLGRTRFQELRSKIGVCSLDKSSQT</aaseq> |
| Gene Sequence |
<dnaseqindica>2841..3873#2008..2627#1..1065#atgcggatcggcggcctcgccaacaaccttcgcaccttaggtgataatatcactgaagctgaggtcgttcagaaattgttgcaggttgtcccagaacatctccagcaaatagccatctcgattgagaccttgctcgacgtcaatgagctgtctctcgaggaggttactgggcgtctgcgctccgtcgagcaacgcaagcagtgcaagactgcggcggcatcgagtcgggtcgacgccaatggccgtctcctcttcaccgaggaagaatggctggcgaaattccgcaaggcggcctctctgcaagacgccgctcactcctccagcggcaacggcgaccgccggggtcgagggcgtgggaagaaggacgatggagccccgaaggaggcccagcccaagccagccaacccgggaggccgtaacccgggaaattgcaagaattgcggcaagaggggacattgggccaaagactgtcgcagcaagcccaaggcccagcaagcttacgtagcccaggaggaggacgaagagcctgctctgctcctggccaaggtgcagctggatccgccgcgtcctcgcgtcgctgcaccgacaaacgtcgtctcgccaccgagcgcgccgagggcgccgtcgccgattggcgaacttgccgtggtcgaggccaaggtcttcgcgcagctagacgacggtggcgaacatgatccggcgatgtggatcctggatactggcgcaaccaaccatatgaccgggtcccgctccgctttcgccgagctcgacacggcggtcaccggcactgtcaggtttggcgacggctcggtggttcgcatcgagggccgcgtcaccgtcctgttctcctgcaggttcggggaacaccgcggcatcgccggggtctactacatcccgcggctcacggcgaacatcgtcagccttggacagctggatcgttccggcagcaaggtactgattcatcacggcatcctgcacgtgtgggatcctcgagggcacctactcgtccgtgtccgacgctccgacgactgcctctacaccatcaagctggacatcgaccgtccggtctgcctcgcggcaaggagcgccgagccggcgtggcggtggcacgccaggtacggccacctcaactttcctgctctccgcaagctcgcgcaacaggaaatggttcgtgggctgccgctgctacaacaagtcactcaagtctgcgatggctgtttgctcgggaagcagcggcgagcggcgttcccgacgcagtccaagtaccgcgctgacgaacatctggagctcgtccacggcgatctctgtgggccgatcgaacctgcaacgccggctggtaatcggtattttttgttgcttgtcgatgacatgagccgctatatgtggctaaccatgattaggagcaaggatgaggccgcgaacgccatcaagcactttcaggcccgtgcagaggtggagtccgggcgcaaactccgtgcactgcgcatggatcgtggaagcgaattcacctcaatcgaatttggggaatactgcgccaatctcggagttggtcggcagttgacggcgccctactccccgcagcagaacggagtagtggagcgtcgaaaccaaaccatcgtcgccactgcccgcagcatgatgaaggcgaagggtgttcctgggcggttctggggagaggccatgtccacagcggtctttctcttgaatcgttcgccgacgaaaagcttggacaaccagacgccctatgaagcatggtatggccaatggcccgctgtgcatttcctgcgcactttcgggtgcgtggggcacgtcaagatcaccaagcccgggctgaagaaactcgatgaccggagtgcgccaatggtgctcctcggctacgagcaaggctcgaaggcctaccggctctatgatccagtcagcgagcgcgtccatgtgtctagggacgtggtgtttgatgaagacatcgcctgggactggggaccagtgacgcctgatggtgctccccagctcgagccgttcaccgtcgaacaggtggtgacgaccaccatcgggacggcacctgcttcgtcgccgactccaccctcgccaccatcgccggctccgtcggcccccacgacaccggcacctccgtcgcctccgtcgccggaggcggttgagtttgtcacgccgcctacccaagattccatcctggacgccgacgcagatgacgacgtcgtgcctcgctaccgcctggtggataacctgctggggaatgcctcaccgcccggacacgctccgcgggtgctggaacagctcgagctccatgttgtgagcgccgacgaacctgcttcactggctgaggctgaggcggatccaagctggcgtggcgccatgcaagacgagcttaacgcgatcgtcgacaacgacacttggtcgctcactgacctaccccatggccaccgtgcaattgggctaaaatgggtctacaagctgaaacgtgacgaacagggggcgatcgtgcgctacaaggcgcgcctcgtcgctaaggggtacgtccagcgacagggggtggacttcgacgaggtcttcgcacttgtcgcccggctggaatcggtgcgcctccttctcgccgtcgccgcgcaccaagggtggcaagtccaccacatggacgtcaagtcggcattcctcaacggcgagctgctcgaggaagtttatgtctcgcagccgccgggttttgtcgacgacaaccacaagaacaaggtgtatcgcctacacaaagctctttacggcttgcgccaggcgcctcgcgcgtggaatgccaaacttgatagctccttgctgtcactcggctttcaccgcagcagctccgagcatggtgtgtacacacgcaccaggggaggaagacgactgatggtgggcgtctacgtcgatgacctcatcatcaccggcgatcacgacgacgagatccgcagcttcaagggagagatgatgaagctcttcaagatgagtgatttgggggcactcagatactacctcggcatcgaggttacccaggacagtgatgggatcacgctggggcaagccgcatatgccggcaagattcttgagaaggcaggactcaaggactgcaatccctgtcagactcctatggaggtacgtttgaaattgagaaagggttcagattttccgcttgtggatgctacactgtatcgcagcttggttgggagtctgcgctatctcgtcaacacgcgacccgacctggcattctctgttgggtatgtcagtcgcttcatggagtcacccagggaagatcatctcgctgccgttcggcgcatactgcgctatgtggcaggcactcgctgctggggaattcgatttggcccaggtgcacggtgcgctttgccaatgctggttggttactctgacagtgatctggctggcgatccagatgagcgaaagagcacgtccggccagattttcttcatcaatggcgggcctgtcacttggcagtcctccaagcagaaggtggtggcattgtcttcctgtgaggccgagtacatcgccgcagccgccgcaacatgtcaaggagtatggctcgcgcggctgttagcggaggtgctgggcgacgagatcaccgcaccgctgctgaaggtggacaaccagtccacaatatcattgataaaaaatccagtgcatcatgaccggagtaagcatatcgatgtcaaatatcattatatccgggagtgtgcagaaaagaaactgatcgaaatgatgttcgtgggaactgcggagcagctcggtgatatattcaccaaatctctgggcagaaccaggtttcaggagcttcgttcaaagatcggtgtctgttctcttgacaagagcagtcagacttaa</dnaseqindica> |
| External Link(s) |
