Os04g0203500

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Revision as of 11:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0203500| Description = Similar to Cysteine proteinase| Version = NM_001058767.2 GI:297602241 GeneID:4335156| Length = 1130 bp| Definition ...")
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Gene Name

Os04g0203500

Description

Similar to Cysteine proteinase

Version

NM_001058767.2 GI:297602241 GeneID:4335156

Length

1130 bp

Definition

Oryza sativa Japonica Group Os04g0203500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:7001348..7002477

Sequence Coding Region

7001348..7001780,7001889..7002001,7002013..7002477

Expression

GEO Profiles:Os04g0203500

Genome Context

<gbrowseImage1> name=NC_008397:7001348..7002477 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:7001348..7002477 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggccaaggctctgctcttcgccatcctcggatgcctctgcctctgcagcgctgttctagcagctcgtgagctgagcgatgacgcggccatggcggcgaggcacgagaggtggatggcgcagtacgggcgcatgtacaaggacgatgccgagaaggcacgccggttcgaggtgttcaaggccaatgtcgccttcatcgagtcgttcaatgctggtaatcacaagttctggctcggcgtcaaccagttcgccgacctcaccaatgacgagttcaggtcgacgaagaccaacaagggattcattcctagcacgactagggttcctactggattcaggaatgagaatgttaacattgatgcgctgccggcgaccatggactggagaaccaagggcgtggtcactcccatcaaggatcaaggccaatgtggttgttgttgggcgttttcggccgtggcagccatggaaggtattgtcaagctaagcacgggcaaacttatctctcactctctgaacaagagcttgttgactgtgatgtccatgggctgcgagggtgggctcatggatgatgccttcaaattcatcatcaagaatggtggcctcaccaccgagtccaactacccatacgcagcagtagacgacaagttcaagagtgtatccaacagcgtcgcatcgatcaagggctatgaggatgtgccagccaacaatgaggctgcccttatgaaggcggtggctaaccaacctgtgtctgtggccgtcgatggaggcgacatgacattccagttctacaaaggtggtgtgatgaccggctcatgtggcactgacttggaccatggtattgtggccattggctatggcaaggctagtgatggtaccaagtattggttgctgaagaactcctggggcatgacttggggtgagaatggtttcttgaggatggaaaaggacatttctgacaaaaggggcatgtgtggcctcgccatggagccttcctaccctactgcatag</cdnaseq>

Protein Sequence

<aaseq>MAMAKALLFAILGCLCLCSAVLAARELSDDAAMAARHERWMAQY GRMYKDDAEKARRFEVFKANVAFIESFNAGNHKFWLGVNQFADLTNDEFRSTKTNKGF IPSTTRVPTGFRNENVNIDALPATMDWRTKGVVTPIKDQGQCGCCWAFSAVAAMEGIV KLSTGKLISHSLNKSLLTVMSMGCEGGLMDDAFKFIIKNGGLTTESNYPYAAVDDKFK SVSNSVASIKGYEDVPANNEAALMKAVANQPVSVAVDGGDMTFQFYKGGVMTGSCGTD LDHGIVAIGYGKASDGTKYWLLKNSWGMTWGENGFLRMEKDISDKRGMCGLAMEPSYP TA</aaseq>

Gene Sequence

<dnaseqindica>1..433#542..654#666..1130#atggccatggccaaggctctgctcttcgccatcctcggatgcctctgcctctgcagcgctgttctagcagctcgtgagctgagcgatgacgcggccatggcggcgaggcacgagaggtggatggcgcagtacgggcgcatgtacaaggacgatgccgagaaggcacgccggttcgaggtgttcaaggccaatgtcgccttcatcgagtcgttcaatgctggtaatcacaagttctggctcggcgtcaaccagttcgccgacctcaccaatgacgagttcaggtcgacgaagaccaacaagggattcattcctagcacgactagggttcctactggattcaggaatgagaatgttaacattgatgcgctgccggcgaccatggactggagaaccaagggcgtggtcactcccatcaaggatcaaggccaatgtggtaagaaaattcaggctactcagatgacattcttcagtatcttttatgatagagttttgtgataacatctattgtgtccaatgcattgaacatgaatgattattgcaggttgttgttgggcgttttcggccgtggcagccatggaaggtattgtcaagctaagcacgggcaaacttatctctcactctctgaacaagagcttgttgactgtgatgtccatggtgaggaccagggctgcgagggtgggctcatggatgatgccttcaaattcatcatcaagaatggtggcctcaccaccgagtccaactacccatacgcagcagtagacgacaagttcaagagtgtatccaacagcgtcgcatcgatcaagggctatgaggatgtgccagccaacaatgaggctgcccttatgaaggcggtggctaaccaacctgtgtctgtggccgtcgatggaggcgacatgacattccagttctacaaaggtggtgtgatgaccggctcatgtggcactgacttggaccatggtattgtggccattggctatggcaaggctagtgatggtaccaagtattggttgctgaagaactcctggggcatgacttggggtgagaatggtttcttgaggatggaaaaggacatttctgacaaaaggggcatgtgtggcctcgccatggagccttcctaccctactgcatag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0203500, RefSeq:Os04g0203500