Os04g0208400

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Revision as of 11:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0208400| Description = Cyclin-like F-box domain containing protein| Version = NM_001058782.1 GI:115457293 GeneID:4335171| Length = 2102 bp|...")
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Gene Name

Os04g0208400

Description

Cyclin-like F-box domain containing protein

Version

NM_001058782.1 GI:115457293 GeneID:4335171

Length

2102 bp

Definition

Oryza sativa Japonica Group Os04g0208400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:7247153..7249254

Sequence Coding Region

7247384..7247761,7247862..7248005,7248141..7249190

Expression

GEO Profiles:Os04g0208400

Genome Context

<gbrowseImage1> name=NC_008397:7247153..7249254 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:7247153..7249254 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaaggtgcgccgatcatctaccttgaccccgccacggtggcggaagcgcgccgccgcggcgacgacccgcgcaagctggaggagtgcaccaagtacttgatgacgcacatctacgggttgctccctggcccacccgtacccatcgccgccgcccgcacccacgccgcctgcgccgccgcagcctccgacggcgtcgaccgcatcagcgccctccccgacgcgatcctccgcaacatcgtctcccgcctccccgtcaaggacgccgcgcgcaccgccgcgctctcccgccgctggcgcccgctctggcgctccacgccgctcgtcctcgtggacgcccacctcttcccgcgaggtcgaagcttcggtgtctccgcctctgccccgacgcgcgccgacacgccgggcatcgtcgccgccgtgtcccgcatcctcgccgcgcacccggggccattccgctgcgtccacctcctctgcggcttcatgggatcgtaccaggcccagctcgagcactggctccggttcctcgccgccaagggcgtcgacgacctcatcctcgtcaaccgcccatggccgttcgaggcggctctccctgccgccatcctccgcatctccaccctcacccgcctctacatcggcatgtggaagttccccgacattgccggcctccccaccaacaccgccttccccaaccttcgcgagctcggcatctacgccgtcgccatggagaaggagggccgcgaggtcgagttcatcgtggcgagatcccccgtgctggagaccctcaacatccaaggaggcaacacgcaggtgttgcgcctccgcctggagcaccggagccttcgttgcgtgcagatctgctcgtgttgcgtggagaatctcgccgtggtggacgcgccatgcctcgagcggctcgtgctctatgattctttgagcaaggatgactcctgcgtcagggtcaagatcgtccatgcccccaggctgcgcttgttgggaaacttggagacaggattccacatgctggagatccatgacacctttgtcagtgctgggatcaggtcgagcccaagcgcattgttcacgagcgtcaagatcctggggttgaatgtgaattttggagtcaggcatgatgcccagatgctgcccaacttcctcaaatgctttcccaatgctgagtccctgcatgttgtgtgtgcaaaatgttctgaagccaccagcttggtaagccccaatttctgggatgatgctggcccaatcgaaagcatcgtgtcccatgtcaatgtgcttacattccgtgaattcaaaggggaggccaacgcgatatccttcctgaagtacttcgtccagaatgcgcagatggtgaagaatgtggctgtggtgttggccaatccacaattcacttcatactccattgatacgctctggacagcgaagatcctcaaatctgtgagatgggccagtaagatctcttcaatgcaggtctataggagcgatgactcagaaggtggtctgatttggagctttcagagaggatcagattattctatccgtgacccttttgtgtactag</cdnaseq>

Protein Sequence

<aaseq>MAEGAPIIYLDPATVAEARRRGDDPRKLEECTKYLMTHIYGLLP GPPVPIAAARTHAACAAAASDGVDRISALPDAILRNIVSRLPVKDAARTAALSRRWRP LWRSTPLVLVDAHLFPRGRSFGVSASAPTRADTPGIVAAVSRILAAHPGPFRCVHLLC GFMGSYQAQLEHWLRFLAAKGVDDLILVNRPWPFEAALPAAILRISTLTRLYIGMWKF PDIAGLPTNTAFPNLRELGIYAVAMEKEGREVEFIVARSPVLETLNIQGGNTQVLRLR LEHRSLRCVQICSCCVENLAVVDAPCLERLVLYDSLSKDDSCVRVKIVHAPRLRLLGN LETGFHMLEIHDTFVSAGIRSSPSALFTSVKILGLNVNFGVRHDAQMLPNFLKCFPNA ESLHVVCAKCSEATSLVSPNFWDDAGPIESIVSHVNVLTFREFKGEANAISFLKYFVQ NAQMVKNVAVVLANPQFTSYSIDTLWTAKILKSVRWASKISSMQVYRSDDSEGGLIWS FQRGSDYSIRDPFVY</aaseq>

Gene Sequence

<dnaseqindica>1494..1871#1250..1393#65..1114#agtgactcgtcgccgccgtccagaaccccaaaccaaaccctagccggcggcgtcgtcggaatccatggcggaaggtgcgccgatcatctaccttgaccccgccacggtggcggaagcgcgccgccgcggcgacgacccgcgcaagctggaggagtgcaccaagtacttgatgacgcacatctacgggttgctccctggcccacccgtacccatcgccgccgcccgcacccacgccgcctgcgccgccgcagcctccgacggcgtcgaccgcatcagcgccctccccgacgcgatcctccgcaacatcgtctcccgcctccccgtcaaggacgccgcgcgcaccgccgcgctctcccgccgctggcgcccgctctggcgctccacgccgctcgtcctcgtggacgcccacctcttcccgcgaggtcgaagcttcggtgtctccgcctctgccccgacgcgcgccgacacgccgggcatcgtcgccgccgtgtcccgcatcctcgccgcgcacccggggccattccgctgcgtccacctcctctgcggcttcatgggatcgtaccaggcccagctcgagcactggctccggttcctcgccgccaagggcgtcgacgacctcatcctcgtcaaccgcccatggccgttcgaggcggctctccctgccgccatcctccgcatctccaccctcacccgcctctacatcggcatgtggaagttccccgacattgccggcctccccaccaacaccgccttccccaaccttcgcgagctcggcatctacgccgtcgccatggagaaggagggccgcgaggtcgagttcatcgtggcgagatcccccgtgctggagaccctcaacatccaaggaggcaacacgcaggtgttgcgcctccgcctggagcaccggagccttcgttgcgtgcagatctgctcgtgttgcgtggagaatctcgccgtggtggacgcgccatgcctcgagcggctcgtgctctatgattctttgagcaaggatgactcctgcgtcagggtcaagatcgtccatgcccccaggctgcgcttgttgggaaacttggagacaggattccacatgctggagatccatgacacctttgtcagtgtgcgtatgccattgccatcatctctaacctcttactgttcagtttgtttgttcactctgattctgaattgctgatgtcccaaattctgatatttgaatatctgaacaatccatttccatcttaatggatttcaggctgggatcaggtcgagcccaagcgcattgttcacgagcgtcaagatcctggggttgaatgtgaattttggagtcaggcatgatgcccagatgctgcccaacttcctcaaatgctttcccaatgctgagtccctgcatgttgtggtatgaattgaacctgcctcattgccttcttgtgctactgcatgatcaattagttgctagctgaactctgaaacatttactgatttaaccatttctgcagtgtgcaaaatgttctgaagccaccagcttggtaagccccaatttctgggatgatgctggcccaatcgaaagcatcgtgtcccatgtcaatgtgcttacattccgtgaattcaaaggggaggccaacgcgatatccttcctgaagtacttcgtccagaatgcgcagatggtgaagaatgtggctgtggtgttggccaatccacaattcacttcatactccattgatacgctctggacagcgaagatcctcaaatctgtgagatgggccagtaagatctcttcaatgcaggtctataggagcgatgactcagaaggtggtctgatttggagctttcagagaggatcagattattctatccgtgacccttttgtgtactaggaaccagaggtgcctacatatgtgatccatccaagctcagtttctctgaaagttgttagtgttatgtttgcaggataggtgtatctacatctccacatgcaaggcattgttttttgttgttggcatgtgctcaagactggacagggtttttggtctcattagtagtgtagtacgattagctttaatttagtagcaagtttattctagccaacaagtgccattccacagagg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0208400, RefSeq:Os04g0208400