Os04g0208500

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Revision as of 11:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0208500| Description = Cyclin-like F-box domain containing protein| Version = NM_001058783.1 GI:115457295 GeneID:4335172| Length = 2140 bp|...")
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Gene Name

Os04g0208500

Description

Cyclin-like F-box domain containing protein

Version

NM_001058783.1 GI:115457295 GeneID:4335172

Length

2140 bp

Definition

Oryza sativa Japonica Group Os04g0208500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:7252949..7255088

Sequence Coding Region

7253249..7253623,7253719..7253862,7253961..7255001

Expression

GEO Profiles:Os04g0208500

Genome Context

<gbrowseImage1> name=NC_008397:7252949..7255088 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:7252949..7255088 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacacccgcgtgccgcccgtccccatgggccgcgcgatggcggccgagttccggcggcgcggggacgacccggacgacgtgcaggggacggtggcgcgcgtgctctcctacatccactacgccctccccgacccgcccgtctccgccgccgcgcgcctctacgcgctcgccccgcacgacgccgtcgaccgcatcagcgccctccccgacgcgctcctccgcagggtcgtctcccgcctccccgtcaaggacgccgcgcgcaccgccgcgctctcccgccgctggcgcccgctctggcgctccacgccgctcgtcctcgtcgacgcccacctcctctcctcctcctccgccgcccccggcgctcccgacgactcctccaagaaggcgcgggaggcggcacgcggcgtcacccacgccgtgtcccgcgtcatgggcgcgcacccgggcccgttccggtgcgtccacctcacgtccagctgcatggaggagttccagggcatgctcgcgaactggctccaggtgctcgccatgaagggcatccaggagctcgtcctcgtgaaccgcccgtggccgctcgacctgggcctccccgccaccttcttcggcatggccacgctcacccgcctctacctcggcctctggaagttccccgccacggctgacctcccgcgcggcgtctcgttccccaacctccgcgagctcggcctctgcagcgtcgtcatggacacgcaggacatggatttcgtcctcgccaggagccccgtcctggagacgctctgcatcaaggggaacctgttcaggatgcgcatccgcctcgccagccgcagcctccggtgcgcgcagatcatcggctcctcctacgaggagatcgccgtggtggacacgccgtgccttgagcgcctcatcgtctccggcacatggaggcatgacggcgcctcctccggcagcgtcaagattgggaatgcgccggctctgcgcgtgtttgggtacttggaccctgcagcgaacgttcttgtggttggcaaaaccgccatcaagtccgcgacaaaggtgagcccaagcaatatggtaccaaacgtcaagatccttgctctggaggtgcgtttcggtgtccgcaacgatgccaagatgatccccaatgtcctcagatgctttcccaacattgagaggctccacatcaagtctggaaaaactgatgaaaccactggcaagctcaacttcaagttctggcaggagtctggtcccatcgagtgcattcggtcaagcatccagatgattgttttccatgattttcatggcactcggagtgaggttaactttctcaagtttttcttcgagactacgcgggtgctgaagatagtggtcattttgtttgacactggaagtttttcttcgatggatgaggtgcgttccaaggtggaggttctgagggctgcaaaacggccgactggttgtttagtcctggtcaccccaagtacagaacctgaagagtgtaacatttggagcttcaagagaggatctgatttttctcgttttgaccctttcacggactactga</cdnaseq>

Protein Sequence

<aaseq>MDTRVPPVPMGRAMAAEFRRRGDDPDDVQGTVARVLSYIHYALP DPPVSAAARLYALAPHDAVDRISALPDALLRRVVSRLPVKDAARTAALSRRWRPLWRS TPLVLVDAHLLSSSSAAPGAPDDSSKKAREAARGVTHAVSRVMGAHPGPFRCVHLTSS CMEEFQGMLANWLQVLAMKGIQELVLVNRPWPLDLGLPATFFGMATLTRLYLGLWKFP ATADLPRGVSFPNLRELGLCSVVMDTQDMDFVLARSPVLETLCIKGNLFRMRIRLASR SLRCAQIIGSSYEEIAVVDTPCLERLIVSGTWRHDGASSGSVKIGNAPALRVFGYLDP AANVLVVGKTAIKSATKVSPSNMVPNVKILALEVRFGVRNDAKMIPNVLRCFPNIERL HIKSGKTDETTGKLNFKFWQESGPIECIRSSIQMIVFHDFHGTRSEVNFLKFFFETTR VLKIVVILFDTGSFSSMDEVRSKVEVLRAAKRPTGCLVLVTPSTEPEECNIWSFKRGS DFSRFDPFTDY</aaseq>

Gene Sequence

<dnaseqindica>1466..1840#1227..1370#88..1128#agtccacaccacacgacgccccaaaccctcgtcggctcgtccccttccctagttcccttccggccccggcggcggcgagcggcgaccatggacacccgcgtgccgcccgtccccatgggccgcgcgatggcggccgagttccggcggcgcggggacgacccggacgacgtgcaggggacggtggcgcgcgtgctctcctacatccactacgccctccccgacccgcccgtctccgccgccgcgcgcctctacgcgctcgccccgcacgacgccgtcgaccgcatcagcgccctccccgacgcgctcctccgcagggtcgtctcccgcctccccgtcaaggacgccgcgcgcaccgccgcgctctcccgccgctggcgcccgctctggcgctccacgccgctcgtcctcgtcgacgcccacctcctctcctcctcctccgccgcccccggcgctcccgacgactcctccaagaaggcgcgggaggcggcacgcggcgtcacccacgccgtgtcccgcgtcatgggcgcgcacccgggcccgttccggtgcgtccacctcacgtccagctgcatggaggagttccagggcatgctcgcgaactggctccaggtgctcgccatgaagggcatccaggagctcgtcctcgtgaaccgcccgtggccgctcgacctgggcctccccgccaccttcttcggcatggccacgctcacccgcctctacctcggcctctggaagttccccgccacggctgacctcccgcgcggcgtctcgttccccaacctccgcgagctcggcctctgcagcgtcgtcatggacacgcaggacatggatttcgtcctcgccaggagccccgtcctggagacgctctgcatcaaggggaacctgttcaggatgcgcatccgcctcgccagccgcagcctccggtgcgcgcagatcatcggctcctcctacgaggagatcgccgtggtggacacgccgtgccttgagcgcctcatcgtctccggcacatggaggcatgacggcgcctcctccggcagcgtcaagattgggaatgcgccggctctgcgcgtgtttgggtacttggaccctgcagcgaacgttcttgtggttggcaaaaccgccatcaaggtgcattgctcgtttcaattccacaacttcttaaatataacgatggcaatttgtgatttttcagccttaattgggtgcattttgttctgtgattgcagtccgcgacaaaggtgagcccaagcaatatggtaccaaacgtcaagatccttgctctggaggtgcgtttcggtgtccgcaacgatgccaagatgatccccaatgtcctcagatgctttcccaacattgagaggctccacatcaaggtgaaattacacctccatccacattcatttgcatcttaatctgtcatcactagctgatgaacaaatctctggtgactgatctaaccaatttgcagtctggaaaaactgatgaaaccactggcaagctcaacttcaagttctggcaggagtctggtcccatcgagtgcattcggtcaagcatccagatgattgttttccatgattttcatggcactcggagtgaggttaactttctcaagtttttcttcgagactacgcgggtgctgaagatagtggtcattttgtttgacactggaagtttttcttcgatggatgaggtgcgttccaaggtggaggttctgagggctgcaaaacggccgactggttgtttagtcctggtcaccccaagtacagaacctgaagagtgtaacatttggagcttcaagagaggatctgatttttctcgttttgaccctttcacggactactgaaagaaaaagatgcatttccatgtcattttgtgatccaagacaaatatctttggaagtggttagtgctctgtttgcagcttcatggtattcatgttagagtttcggcttcccttttattgaagattggacagcggacttgattatactgtcttgagaagtgttgaaattagtgcttgaatagtgttatctatcatgcaaatgtcaaattatgttttctggatgacaactaagaactactgtgtctgctatgcgtttcatttgttgttggacgatgatgatgttatgttgcactgttttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0208500, RefSeq:Os04g0208500