Os04g0218600

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Revision as of 11:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0218600| Description = Conserved hypothetical protein| Version = NM_001058796.1 GI:115457321 GeneID:4335189| Length = 7494 bp| Definition ...")
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Gene Name

Os04g0218600

Description

Conserved hypothetical protein

Version

NM_001058796.1 GI:115457321 GeneID:4335189

Length

7494 bp

Definition

Oryza sativa Japonica Group Os04g0218600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:7912455..7919948

Sequence Coding Region

7912951..7912986,7913063..7913173,7913260..7913310,7913408..7913508,7913686..7913774
,7915355..7915488,7915579..7915785,7915900..7915978,7916381..7916475
,7916559..7916645,7916724..7916798,7916877..7916924,7918014..7918109
,7918208..7918437,7918830..7919948

Expression

GEO Profiles:Os04g0218600

Genome Context

<gbrowseImage1> name=NC_008397:7912455..7919948 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:7912455..7919948 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcggcaaccctatcgccatcttcttcatccagctcattggaatccctatacctggactggaacctgacctccagcctctagtcaactacctattgccacatatcactgcacacaaacaatcctctcaaaatatccacctccagttactcaaagacattgcaagcaggctaccaccatttctgccccagattgaggctgacctcgctagtgtcacagacactccagacagcagtgtacactttttggctctgcttgctgggccattttatccaatcctccaacttacaaatgaaagggattttactaaatcattaattagctctgctgattcagatgctctgaaaagtagtttggcttctactccaacggtttcttcaaactttgaggcacaacctaggagatcacggagtccatcttctgttcagcctgcttgttttctggcatttcgatctgaaacagccgtactgctcttaaggaaagcacacagagacagagcccttggaattgtttgcctgaaagcatcaaaggtcctgcaagaacttctggagcccgatccattgttagatgatgcttctgaccaagtactttgtacagactactctagtttgtttggagatgaatttagcttatcggagaatcgctttgatgcctctattctgaacattttggatattgctgctgttgaagaaggcattcttcatatactatatgcagcttcatcacagcctctgttatgttgcaagcttgctgagaaaggttcagacatgtggtctgtcttaccacttgttcaagctctgcttccagcacttcgtcctccacttagccctggttctactgaacagattgatggttgtcttagccaatggaatcatccaaatgttcataaagctctctctcagattgctacaatgtcaatgtcatcatcagttcttcatcctcttctcagagcctgtgctggttatctttcatcctacctgtcatcacatgcaaaagcagcctgtgttttgcttgacttatgcaggggaccattatcaccatgggtacccatgatcacagcaaaggtagaccttgccattgaacttctggaggatctcctgggtattatccagggagttggtcaatctcttactcgttctcgtgcagcactgaagtatattgcattggccatatctggccatatggatgatgttctcacagaatataaagacgtcaaacataagttacttttcattctggagatgctagatccttttattgatccttctgtaagtgttatgacagatgcaatggcatttggtgatgtgtctgttgtgcatttggagaagcaagcaagcgcttgcaatatttcgttaaatattatccgtacagcagtgaagaggcctgctgttctcccttctttagaacttgaatggcgtcgtggtgctgttgccacaagtgttattctctctaccttggatccgcatatgccactccctcctgacatagatctctgcaaaagttcaatgcctgagattgatcaaatatctctgatagttccaaactgtccaccgcactcctgcagtgctgaagatgctgatgggcgtgatacatctgaaacaactcccagggcagatattcttgaacagtgcaattctttatttgctccagaagaattagagcaatctgagttgacaaagactttggaagaaaaaaagcatgagaaaataagtacagatttggaccagaacttcccagaggacacaaaaagtaatggaaaattaccagctggcctttttcagttagataatatttttgctactgattactatgatgcacatgctgattatctgcagctggtgaactatcaggactgtgaattaagagctctagaatttcagcgcttagcactgaatctatgcacacaacaagaacctacagttgaggggcataatgctggaatagatgcttttctgttagctgctgaatgctatgttaatccactctttctcttggatttccattctaattcggagtctttggatgaaattgaacgtattcatgcagaattgatccaaggaaattgtttctctgaggcgaaacatctgcgtgctaaagatattgatctcatgaaaatttataatttggagaataaacgagataaagcggtcctggatttactcatgcaagctgcaagatatgattttgaataccagggaaagatacctgatgggaaaccttttccagatgatgttgaagatggcaagcaatatatagaaatttcaccagaggctagacaccttgctgatgctgtaactttggtcagaaagaaccaggctatgctttgtcactttatcatgaaacaatttgaaaagaaaggacactctcctaacgaaattctcctccagagcttgttgttcttgttgcactcagcaactgatctattttgtccaccagagaatgtgatcgatatcatattgaaatccgccgaagatctcaatggaaaacttgtatgtctttacaattccgttaatgcaaggaataataaattggatagaataaaactacattatctacg</cdnaseq>

Protein Sequence

<aaseq>MRGNPIAIFFIQLIGIPIPGLEPDLQPLVNYLLPHITAHKQSSQ NIHLQLLKDIASRLPPFLPQIEADLASVTDTPDSSVHFLALLAGPFYPILQLTNERDF TKSLISSADSDALKSSLASTPTVSSNFEAQPRRSRSPSSVQPACFLAFRSETAVLLLR KAHRDRALGIVCLKASKVLQELLEPDPLLDDASDQVLCTDYSSLFGDEFSLSENRFDA SILNILDIAAVEEGILHILYAASSQPLLCCKLAEKGSDMWSVLPLVQALLPALRPPLS PGSTEQIDGCLSQWNHPNVHKALSQIATMSMSSSVLHPLLRACAGYLSSYLSSHAKAA CVLLDLCRGPLSPWVPMITAKVDLAIELLEDLLGIIQGVGQSLTRSRAALKYIALAIS GHMDDVLTEYKDVKHKLLFILEMLDPFIDPSVSVMTDAMAFGDVSVVHLEKQASACNI SLNIIRTAVKRPAVLPSLELEWRRGAVATSVILSTLDPHMPLPPDIDLCKSSMPEIDQ ISLIVPNCPPHSCSAEDADGRDTSETTPRADILEQCNSLFAPEELEQSELTKTLEEKK HEKISTDLDQNFPEDTKSNGKLPAGLFQLDNIFATDYYDAHADYLQLVNYQDCELRAL EFQRLALNLCTQQEPTVEGHNAGIDAFLLAAECYVNPLFLLDFHSNSESLDEIERIHA ELIQGNCFSEAKHLRAKDIDLMKIYNLENKRDKAVLDLLMQAARYDFEYQGKIPDGKP FPDDVEDGKQYIEISPEARHLADAVTLVRKNQAMLCHFIMKQFEKKGHSPNEILLQSL LFLLHSATDLFCPPENVIDIILKSAEDLNGKLVCLYNSVNARNNKLDRIKLHYLR</aaseq>

Gene Sequence

<dnaseqindica>497..532#609..719#806..856#954..1054#1232..1320#2901..3034#3125..3331#3446..3524#3927..4021#4105..4191#4270..4344#4423..4470#5560..5655#5754..5983#6376..7494#agccgcaggaggaggccggctgggctgcgctgcgcgatggaaccggagagggaggcatcgtcggagtggggagatggtgtcggggtgctgggtttccgggtgaaggcgtcttcgtgcgagccggcggcgcagaaggcggccaatgtgctgtagccagacctgcgctcccactggtccaccgccaccaacaccaaggagtggatcctgctcgagctcagcgtgcgtactagcgacttgttgtttcttccccctctctaactaggagtctccttctctagccctgaatgaattgctgaatttgctgctgcaggagccgtgcctcctctcccacatccgcatctacaacaagtccgtcctcgagtgggagatcactgccggcctgcgctacaacaagccagataccttcgtcaaggttcgcccgcgctgcgaggctcccaagcgcgacatactctatcctgccaaccacaccccttgccgctacgtccgcatctcttgtatgcgcggcaaccctatcgccatcttcttcatccaggtaggagtaactactagtataacttttactcttcctccggatatattccgagtaataagtcactcttcttcttcagctcattggaatccctatacctggactggaacctgacctccagcctctagtcaactacctattgccacatatcactgcacacaaacaatcctctcaaaatatccacctccaggtttgtttcttcttcttcttcttacttctgtctgtgtcttggcaacatataagtttcttctaatcatgcaatttttttgatattagttactcaaagacattgcaagcaggctaccaccatttctgccccagattgaggtaagctttccgactagcatgcatctccccatgtccatgtatggtatgttgtgcctttgttgtttccctttaatcgccgctgtctatctgagtgcaggctgacctcgctagtgtcacagacactccagacagcagtgtacactttttggctctgcttgctgggccattttatccaatcctccaacttacaaatgaaaggtgccagttccttgttcaacattcaactgcatatcaattattttttttatactaagctctgtgctgtcctagattatttttcggacagattatgtgtttgtgcaggttgctgtacagacatgtgtgcgcacacctacatgcaagcactgctatctgaaacaccttcttattttacagggattttactaaatcattaattagctctgctgattcagatgctctgaaaagtagtttggcttctactccaacggtttcttcaaactttgaggcatgtagtttttttctttccaatgtacttctaccgcctttctagtttctgcattgcactatgataatgtgaaatgttatagctgatatatgctgaaagagtgaaagctttgattaaatggtgctgttgcacttgctgctttagtaacacacaattttcatttgtgtgaagtgtctgtaagacctaaccttaatcttcagcacattgttttctcgagagactacgggaattcatagtgctaactaagggtatagacacctggctcctttagaccttaccttgaactataggaacagaagctaatggcaggatgcatcccacagtgacataataaaattagataggttttatggttggatccaatagacaaaaagtccttcatgactattactctgtaggctgcaatatctatgtaagatttgacttaatgaaaactaagaaacacaagttgtttcttttttgaaaccaaaagtagtatcatgtaaatcatccacattttcttatattttactggagctttctgtattccataaaaaccatcatgtaaaccaataagacaatttgggatggttggtcaatattataaattattccctacattccaaaatataaggctcaaccacccttaacccaaaaaccaagatattatcacatcatagtttggatcatcctaatcctatatacttatagttcatccccactaagtgtagttaatgctatttctctcttctctcatgaagccacatcacaattatttctagcctttggatgatagatctatggtacacatagtctcttctttcttctctcataaaaccatgcaatctcaatttttaggctcaaaattcataagtatcaattacataaaatatgttcaccttgcactatattggaaccatttttaggaggtcattttgttttggttataaaatatattgtggcttatttgtacatattatacaacttaatttcccacagaaagacggcggggtatttatctagtaaatatcatgcatgcacccaacagaattaaagatcttgagtatggaggatttaaaaaataataatttagtgggaaagaagtgctagttaatagcatgcattcattccttatattatgaaacatctcgaaaaagtagttgcgccttatattatggaatggagggagtagtaaattattactacctccatcccaaaatataacaacttttggttatgtatcttgggacagagggagtagttatcacctacttcctccatttcatattataaatcattttgggtttgtcctaaatcaaacctcttttgtgaccaagcttataagaaaatatagcaacatttccacaaaataaatatactacaaaaatatatttaatggtgaatttaatgaaactaatttggtgctttagatgttagtacacttacctataaacttggtcaaacttgaagaggtttgacttgacaaaaccgaagtgacatataatatgaaaccgagggagtatttaggatttatgcgtttttcatatgggcatttatcttaattgctcctttcagtttctgaattctttgattccctccaggcacaacctaggagatcacggagtccatcttctgttcagcctgcttgttttctggcatttcgatctgaaacagccgtactgctcttaaggaaagcacacagagacagagcccttggaattgtttgcctgaaagtaggttctttgatgtccttttcctttcttattgattacaaactcttcccctcagagggttttcatgacatgtatttattttgaaattaggcatcaaaggtcctgcaagaacttctggagcccgatccattgttagatgatgcttctgaccaagtactttgtacagactactctagtttgtttggagatgaatttagcttatcggagaatcgctttgatgcctctattctgaacattttggatattgctgctgttgaagaaggcattcttcatatactatatgcagcttcatcacaggttctgtctgaactctgaagttgtatctttgtatatattttcagttcctctgcatttactttctgtttttttttttctagaacacctttataacctttttggtttcaattgtagcctctgttatgttgcaagcttgctgagaaaggttcagacatgtggtctgtcttaccacttgttcaagctctgcttccaggtattaagtggaacatatatacacttgtgctttatattttttactttttgatccaaatggccaaaaaaaatgtgaatagatagaacatttgttaccaaataatgtacatattcccccatgctcattcatatcttatcctatatataccaagtgatgacaggcctctgccaactggtgtaacataatgacacctttgtttttgtgaattttctgggatttatcctttggcctctccgttggcatgggcctaaggctttgggatgattgtaattaactgcctaacttcacccattcgttgagttagagaaggggaattcctgcagttgcataagcgtacaacacagatggctttgttgactggtgtcactgatagtatgctttttctctctcgtgttcctgtagcacttcgtcctccacttagccctggttctactgaacagattgatggttgtcttagccaatggaatcatccaaatgttcataaagctctctctcaggtacctgaattggcactattttattagctttgtcatgcatcacggacatcacttaatattcctcaagttaactgtttctgcagattgctacaatgtcaatgtcatcatcagttcttcatcctcttctcagagcctgtgctggttatctttcatcctacctgtcatcacatgtttgttacataactctctcctacaaaaatatcccatttcttctgaaaattagtgatgtctcttattttcattgttaggcaaaagcagcctgtgttttgcttgacttatgcaggggaccattatcaccatgggtacccatgatcacagcaaaggtttctttttatgatttttccccacacttatttctacaatccatatctttttcacaaccttgtatactctttaaacaggtagaccttgccattgaacttctggaggatctcctgggtattatccaggtatgtacaagttaaaaaaaaaccttagcatggcataatttatgttaacctttgatgcatgtaatctggcatatttctatattgagtaagttgcccacgcattataagaacacttggctggcttgagttttattttgcatgtcgctgaagatatgtgtggtatgtaatctggatcctcttggacaaaagtacacagcgaagtcaggtctggatgcaccaccatactctactattggaatatcaatcaagtgatcaatcaactacctgcagtgctcttccctaagctcagcaattctattcctgttgtgtgtttctagtaagattttttagtggatagtcaccttcttgtcgtatgcacaattgtgcatatcttctgtgtatcctggagtggacagcagcatagatgatagatggcacatgcagaagtgtctgtatcatcatggcagagtgcatggcaatggaccatgtccgtcgagtatgctgaccctgcatcttgagcataacatatcccaggtagaaacgtgagcgatgtgaaaacatcgaaaaagtccggataatatttttgcaaatccgaagttgacacgtgctagcgttgacatgggcctcctaggtatcaaccaatgttatctgctgatgtggaaaaaatcatgcgtggcatgctctatgataaaaacacgctacctgaccagtctttttcacctggaggctcattttcaaattcttgcaccagattctacccatctgccaagttattagagcatacataatttactcttctgtatcttaccatacttctataggattgacacttttgtaccaataactaataaataaagaaatcaattcttcaatttatttattttttattttgggttgactcttgaaggcatttagatatacgatgtgtgaaggtggtatgacaatattggtcatgttttctcactacaaaaggagtattttaccatgactatgcgcctttcctttttgccatcctaagttaatatagatgatttgctttgttacttcaagtcatgatttacccaaatttatgtgggatcaaatggttttgtttcttttaatgtttttcagggagttggtcaatctcttactcgttctcgtgcagcactgaagtatattgcattggccatatctggccatatggatgatgttctcacagaatataaagtacattcatttttcctcctgaaagtgagcttttccttggtgattggtttgttttacagactccttaacttgtattatgtaaatttacctactctcaggacgtcaaacataagttacttttcattctggagatgctagatccttttattgatccttctgtaagtgttatgacagatgcaatggcatttggtgatgtgtctgttgtgcatttggagaagcaagcaagcgcttgcaatatttcgttaaatattatccgtacagcagtgaagaggcctgctgttctcccttctttagaacttgaatggcgtcgtggtgctgttgccacaaggttggtgaactctatatgtttacatgcttatcataaatttgccattaagattgatctgaacttgtcatggttgatgagaaccagaatagtactgtcattatttaattgtgacttcctctggtcacaaaattctccattggaagcatgcaattgaacttcatcattgcagaaaaaaagaataccttggaggaactagttttgcctttagctaataagaaagatatgcacccaagtttgaaccaaagaggacttgggatgtatcatagaacctggtaaaccgtgtgactttagcatgcacatatgattgacggcttaaacattaaagcatttctctagctcagacctactttgtatgctggtaaaaacatgctaaatctagatttgatttgcagtgttattctctctaccttggatccgcatatgccactccctcctgacatagatctctgcaaaagttcaatgcctgagattgatcaaatatctctgatagttccaaactgtccaccgcactcctgcagtgctgaagatgctgatgggcgtgatacatctgaaacaactcccagggcagatattcttgaacagtgcaattctttatttgctccagaagaattagagcaatctgagttgacaaagactttggaagaaaaaaagcatgagaaaataagtacagatttggaccagaacttcccagaggacacaaaaagtaatggaaaattaccagctggcctttttcagttagataatatttttgctactgattactatgatgcacatgctgattatctgcagctggtgaactatcaggactgtgaattaagagctctagaatttcagcgcttagcactgaatctatgcacacaacaagaacctacagttgaggggcataatgctggaatagatgcttttctgttagctgctgaatgctatgttaatccactctttctcttggatttccattctaattcggagtctttggatgaaattgaacgtattcatgcagaattgatccaaggaaattgtttctctgaggcgaaacatctgcgtgctaaagatattgatctcatgaaaatttataatttggagaataaacgagataaagcggtcctggatttactcatgcaagctgcaagatatgattttgaataccagggaaagatacctgatgggaaaccttttccagatgatgttgaagatggcaagcaatatatagaaatttcaccagaggctagacaccttgctgatgctgtaactttggtcagaaagaaccaggctatgctttgtcactttatcatgaaacaatttgaaaagaaaggacactctcctaacgaaattctcctccagagcttgttgttcttgttgcactcagcaactgatctattttgtccaccagagaatgtgatcgatatcatattgaaatccgccgaagatctcaatggaaaacttgtatgtctttacaattccgttaatgcaaggaataataaattggatagaataaaactacattatctacg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0218600, RefSeq:Os04g0218600