Os04g0220300

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Revision as of 11:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0220300| Description = Conserved hypothetical protein| Version = NM_001058801.1 GI:115457331 GeneID:4335196| Length = 9520 bp| Definition ...")
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Gene Name

Os04g0220300

Description

Conserved hypothetical protein

Version

NM_001058801.1 GI:115457331 GeneID:4335196

Length

9520 bp

Definition

Oryza sativa Japonica Group Os04g0220300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:8001410..8010929

Sequence Coding Region

8001425..8002303,8006131..8006247

Expression

GEO Profiles:Os04g0220300

Genome Context

<gbrowseImage1> name=NC_008397:8001410..8010929 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:8001410..8010929 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gctggccatacatgcatccatcatccatggctgggatatcgcagctcctcctgcgcgagtccaccatcaccatcaccatcaccaccaccactaatattcccggtgccggcgtcgaattgcccagacaagtgcggcaacgtatccatcccctacccgttcggcatcggcagaggctgctacctcgacctgccgggctccggcagcttcagcatcacctgcaaccacaagacggaccctccccaaccctacaccgccgatgccctcttggtcctgaacataacgctggagacagcggaaatgttcgtcgtctcggctggcgccctcgccgtggtcaagtacccatcagtaagagcaagaagtgccatcacgagcaaatttatcactactactcaacaagaagaagaacattctatgcaagtaaaagtaactgtaggaatgcctgtcacccaacaagtaaacatgacattcttaccaagcggatacaccttgagcgcaccgtaccggctttccccgacgggcaacatgttcacggccgtggggtgcgtcaccatggcgaagttgtacggcagcgtagagaacagcagcagccagcagcagcacgggggcgacgacgacgacagcagcagcagcaggagggcaaatgataggggagagggcgtatgcgtacgacgcgggctgcatcacctactgcccgagcctgagcgacgccgcggcggatggggcgccgtgcaaggacctcggctgctgcgagtcgcccatcacgccaggcctcacccagttcgccgtaggatgggggcgatggccaggtgcatccgacgacgactacggcgagttggaccccgaacagtactaccagtatgcctttgtggcccaggactggtatacgttcaaacaagatcatcttactcactgggacatagacaacatcagtgttcctttcgttcttcactgggatatcaaggatggacctgcatgccgaccagagacaaattatga</cdnaseq>

Protein Sequence

<aaseq>AGHTCIHHPWLGYRSSSCASPPSPSPSPPPLIFPVPASNCPDKC GNVSIPYPFGIGRGCYLDLPGSGSFSITCNHKTDPPQPYTADALLVLNITLETAEMFV VSAGALAVVKYPSVRARSAITSKFITTTQQEEEHSMQVKVTVGMPVTQQVNMTFLPSG YTLSAPYRLSPTGNMFTAVGCVTMAKLYGSVENSSSQQQHGGDDDDSSSSRRANDRGE GVCVRRGLHHLLPEPERRRGGWGAVQGPRLLRVAHHARPHPVRRRMGAMARCIRRRLR RVGPRTVLPVCLCGPGLVYVQTRSSYSLGHRQHQCSFRSSLGYQGWTCMPTRDKL</aaseq>

Gene Sequence

<dnaseqindica>16..894#4722..4838#aagctggtagtttaagctggccatacatgcatccatcatccatggctgggatatcgcagctcctcctgcgcgagtccaccatcaccatcaccatcaccaccaccactaatattcccggtgccggcgtcgaattgcccagacaagtgcggcaacgtatccatcccctacccgttcggcatcggcagaggctgctacctcgacctgccgggctccggcagcttcagcatcacctgcaaccacaagacggaccctccccaaccctacaccgccgatgccctcttggtcctgaacataacgctggagacagcggaaatgttcgtcgtctcggctggcgccctcgccgtggtcaagtacccatcagtaagagcaagaagtgccatcacgagcaaatttatcactactactcaacaagaagaagaacattctatgcaagtaaaagtaactgtaggaatgcctgtcacccaacaagtaaacatgacattcttaccaagcggatacaccttgagcgcaccgtaccggctttccccgacgggcaacatgttcacggccgtggggtgcgtcaccatggcgaagttgtacggcagcgtagagaacagcagcagccagcagcagcacgggggcgacgacgacgacagcagcagcagcaggagggcaaatgataggggagagggcgtatgcgtacgacgcgggctgcatcacctactgcccgagcctgagcgacgccgcggcggatggggcgccgtgcaaggacctcggctgctgcgagtcgcccatcacgccaggcctcacccagttcgccgtaggatgggggcgatggccaggtgcatccgacgacgactacggcgagttggaccccgaacagtactaccagtatgcctttgtggcccaggactggtaactagctaattccggacctgatgatgattctttgttatactatatctttgcaagtttttagatgttttcccatttctaattaataacttgacgttgcctagctacccaccatatattatgggttttaattggtgtttcccatatatatatctctagtaaagaaaatttcagcacaaggaatatatatagcacccatatatataatactaaaagaattggcacacgtatgaatttttaaaattgtttcaacagtaatgtagttcaaagactgttcatttcaagtcatctatagcatcaaaatacattacgttttttggaaaggacttagaagaattgcatgtatagtgtacactgctggagaatgcatatatactcccggttcacatccctctttaatcccgggtatgcaaccggaactacgaatcgggtgaaataaccgggactaaagatatatcttctttagtcccggttggtgtagccatctagagtttatttttttcttttttttctattgtttttagctgcttgcatatttttttcgtcgttttttgccaacattcacataccaaaaatcacagatcgagttttttttctaatattcacaaatccaacattcacatatcacaaatcccagatccaacatcacaaattcatccaaaaattgaaatcacaaaatcatccaaaaaaaacatatcacatctaaaaattatccccacgcgggtcgccgcctccgcccccgcgccgcatcaggccgccgccacacacggctgccgctgcccccgagcgggccgtcggctccgccccgcgccgggccgccgctgcccccacgtaggccgcctcctccgcccccgcgccgcgccaggctactgccgccgcagacagccgctgcgggccagcgccttcgccccgcgccgcgccagcagcccaccaccgcgttgagccgccgctgccctcatgcgggccaccgcctacgcccctccccccccccccccccgccacgctcgctcctagctgctgcaatatttgagaggagaagatgagagcaagtgaagaagaggataagggagagggggaaagaggtggaatggtaggaggaaattaaaaagataaggagcaagtgtttgcgatagtggaggagaggataagtgcgagggattatatatactacatgttaaattttagtcccgattggtagtaaagattatttagatctttagtccaggttataagatcctcagccccctgacaggccactgacaggccttatcagggatgaaccgggactaaagttccaatcgggactatagatcacatagttccgatggaatttttaagcgggactaaaaatgcttttttattaatctagtttttgactgacccagcaaaggtcagttctccagttgtggtataagtcaacagttaattaattgttcaatactacttactccgtttcaggttataagacgttttgactttggtcaaagtcaaactactttaagtttgatcaagtttgtagaaaaaaatattagcatttttaacccaagacaaatttattatgaaaatatattcaataattgattgggtaaaactaatttagtattataaatattactatatttgcctataaactcatctgtgacgggctccaactccaacccgtaaaaggtgactcggtcccttttgacggggtactttagagcctagcacggatgactaattggtgatatagtcctcttgcaactcaataacaatgttgcttatagttggccaaaagcccgaggcctgatagcccggcccggccatggcacggggttttggtccggcccaagcacggcacgacctctactttggcacgatggcccgacccggcatggccaggtccaactatcagggatttaatagatgagggagccaaaatagacttaatccaaccatataaggcacggcgaaagagatgagggagacaaaatgaacttttcaaaggaggaacacggtaggcttcgtggcttcgagttggtccggcatgacccgagtcttattgggtcgtgcttgggccaaacgcgcagcaagtggatgggcacagcacgatccggcgtgtaggtcgggccgtgtcggcccgactgatatcggcccgagcccggtcatgctcgggccatgctagggcgggtgatccttttggggtgtgtttggttgggtggatgagcctggatgggagatgcatggccgcccgattttttttggtgtttggttggagggcagggtggatggggcggcccagaatagggaatcttccctcaataggttggataagtgcatctggccgatttggttggatgaagccatctagttttggtccgggtgatgtgacctattctgattggctatggttggtttgattttctgttaagcaagctctaaatgattttttttctcctaaactgtttatctaatttatggtttgattacaccattatatttgttacaattaaatctttaaaacaagatctcggatgattatattatgataaaaatatatatatatgacaaatgggtcccactatcttatggtttctcccattcatgctatatcccctaaccaaacaagaaattggatcaacatatccatataaaccaaacaaaaaattgaatcgccatatccaacaaaatatggatggccatatcccatccatgcatgaccgtgaaccaaacacacccttggccatctataatgctgctcaaccgtgacggggttatatatgttgtaatccggcaccaaagaggttttaccttaaaaatgtaactgctaacaaaatgacagaaatagagatatacattcctagaatccccatacatttcacaatcacataaattccaaacctcgattatttacaagtctcaataattggatgcctcacatatttcttcaacaaaactttaagttgcaagcctgaagaatttagggaactggacatgcatcttgaaaagagagctatcacacgacctgtgaatttatatacaatttgataaaaataatagaattagtaacgcaaatgttaccaacagcccaccatatatagatggttgtcatcggtcataggtttgatcacacagcccatcacagatgattgccactgtacgggctgcaggtctccgtcgctgattggctgattaggatgctagggttttgaagtagtaaggctaccagtgctacttccaaagtgccgaagagagtttctctaatagtgaaattctcctaatgactcattttgtttttgtgctccaaatttcatgcagtaccacatggggttttcatccaggggaaaagagatcgatacatttctatgcacataaggttactcgccgtgcacaccaactaacatatatacaagaaattacagaataattgatacatgtacatataatactattgcacctatatgttaatatgtaaagtctcaacagtataacatgaaaaatctgataattttctcagagttttgtcttctatgtctctgtgttcgctgaatctaaagtggagacgttacacttggatatgttgttctattataagtacatgtacaattttttaaggcatgttggtgagatttcttaacacggagcttttgtgtacatccgtttcatctagtctagttgtttgttggaaatctggtcttcatgtatctgagtatctctggggttttgatatcagtaaattctcaacttgtaacctagctgaacaaatcgagtagtattttttattcatgggcgagttattccatcatatatttgtgatatctcacattgattgtaatacttttacgcaggtatacgttcaaacaagatcatcttactcactgggacatagacaacatcagtgttcctttcgttcttcactgggatatcaaggatggacctgcatgccgaccagagacaaattatgatagtcccttcggcgcatgtcatagcaaccacagcaaatgcgccaatgtcaccagtggtttggatggctatttttgcaactgctccgagggatacattggcaatccgtacataccagatggatgcaaaggtttgtatcccagcgctctactctccatccgcatgcttatgttttttttagataatggattaaaaacccgacctctacatccaaaaggatgtacacagcccaacatgtccatacatgagtacttagactccagccattacatgggacaaaaaaaagtttagaagacacgaaaagaagacagaattacaagttcaacaaacaaaacgaaatgactagaccaacaacctcaacgaccaaactcaaagaaccggtctaaacttcaactctctttctgaaattccagccacacctagacaaaaactccaaaactctcatctctaaagccttgcagcattctttaaccacgttgccatcctcttccttaagcagcaaagaccaaagtctcacccaattaatgcattcccctgaaaattacctacataaaagagtacgggtatgatccattaaaaaccacatcattcctactcaatcacaccacccagcacaatgctgaaatgcccacaaacacttgatttttaagcctaggattaacactggttagccaaataccaagtaaatgtgacactgtgtggaggctgatgccaaacgtgaaataaaccacgttgcacacgtacctaaccaatggacaataaaaaaaaggtgttgtattgtctcgttagaattacaaaagcaacatctaaggctacctttccaccttcttttagcaagattgtccttagttaaggtgactcctttctaaagtaccacaagaaaattttaatcttaagtggaagccttagcttccaaataaaagacttcgcatttcgaaacatgattttttttacatcgaattgacagaaaatattccatgcttatgttattagtcgatattgtcggaaatctataaacacccacatcccataggtaagtacgtacatatcccctgtaggataataaccttacacctatctagatcacagctgtcagtggaaaagtttgtacaaggatcggagctctcaagcttgttagactaattcttgctgattgtagaaagaccaactctcactgacgtgcttcggcttgcttttatacccaccaagcaccagcactctctctttctgtccacaaggagacatataatattgtatataatcattagcacaattagctctttgaagccgcgcgcaaccagtttgtagaaaaccaaacccagattcactactggatttggataattggccggaaggcaaaaatcacattagtcccggttcaaataggaatcccggttcaaaagcccaacagtactttttgatctttagtctcggttggtaagatcatttttagcccccgttgagaaagtgttaggcccctcactatctttagtcctggttgggttaccaaccgggattatagatcgacgcgtgcgtatataatctactcgtacttagcaacgcgcggtgcacttcgttgctctcgtctctcaatctcttcgaatcctcccctctccctctctctctctctctctctccctctctcagctctctgtctcgctccctctccctccaccgcaccacccgatgagagcggtgggagcggaggagatggcggcggctcagcagctcggaggtggcggcggcgccctggtggcggcccgatggctcggaggtggcggcggtggctccctccgcctgttcgaactcctcctcctccctttcctcatcctcttcctccgtctatcctcctcctctccgggagcatcgggcggcaacggcagagccctcccttctgtcggatccggtgtcccctcccccggatccagcgggaggggaggcggcaggcggcgcatgaggggcatgcggcggtgcacgagggggaggaggcgagcggcaggcgggcgcaatgatgctcattcttttttttttttgagaattttgtgatgtccattcgagtatgaattctatttgtgatattaactgtgaaatcgtgatgtgaaacatagtatgttcattcgatctgtgatgttaaattgatgtggggatttggggatttatatatggagcaactcgctttggaaaaatcaatatgcaagtagcaaaaaacaataaaaagaagcaacccgaaactaaagggttgcaaaccaggactaaagagggtatcctcagcagttatttactcgccgctatacgcacccaaatccatgcatgtgaacacgagaattttgcttacagcgtactccctccgtccaaaaaaaaaatccaatcctataaatgtttttgaacattcacgttatccatatacatcctcaggattgttttttttccagagcagtatccctttgcgttaatataataggatagtgtaattgaatctggagttaatgtgatggatgtgtgatgtggcactgactcagcaaacaagtaaaggtaaaaattaaagttggcgacgaggaagactacattaattggagattcgtgtagcggtggctcgaggtggaagatgtgagtgaaaggattcagggcatatttggtagagctccaagcctccaactcttaaatttagcttcaggagttgggtctggagtggagttgtggagcagcctaaacccatctccacctctaaagttcattatgtgagagcgcttcacccagctctgctcccactttaggtggaactgaaactgtttggctgagctctagctctaggagtggtggaggtggagctatagctggagctatgccaaacaagctctcaattatgcagcgatagcgatgttgacaaacagtggattgttcctatgacaaataggatagatgcaattttggtttccagcgataaaatgggccacatgtatactccctccttcccataaaaaaccaacttaatactggatgtgacacatcctagttctacgaacctagatatacctttgtccagattcgacgtactagaatatgtcacatccaattctatattcgtttttttggttggatggagcgagtatatatctagctagccaataggctacggtcatctaggccaccgagccaggtcaggctcagcttgcttcattaaggagatacagagccaggccatatttccaacggtaatagaacatcccccaagaagatgagttcataagtcaatgtacatgaatgaatatattcacagtcaaatttagcatttggaaaaatttaggcgaagccttgggagggatccgagagagccttctcgctaaagctagtaagaacccttgtcgatctgaccggaatcctttgtcatgagtagaggtcatggatcggttttgtcatcagaatccaatccaaatccaatttggctcttcttgtgttcccttttttaggtgttagggtttttggagtactaattttctctaaagcctaattaaaccttgatacgcaagaccagccatactataaatatagatgtcaagcctattgtaggaaccaacaattaatcgacaaaatcgatttagtatctaacctctatcttctaccctacctatatcattcttcacttattccatccctattttccctccaatcccataattgctcatcgtattttgtctcccctgcattagaggacatcctaactggcttttcaagcctagatcaaactggcccacactcattttgcgagttgcgttcctccatttgacaatgaacatctacagtaccaccctttcgttgacttatttccgtgttcactactcttgaacccttcctctcgtatcgagaagcactgcatacagggaattttctatggcatatttcttgtactacgatatcaacgcggtcatggcgattcataactacgagtcatagatgacccctcattcttaacaggtgctacatcttagacgagccactctgtgacccgtaagagatgtaattatctgagacgagcatttttcacctatcatagattaatatgcccctgtttagcatcccaagtttaggctgtgcaagttttaacacagggccagagatatttaactacctatattttctccttcatgagcgtgtaagtaaaactaagaatagctttatttatttttatatttaacatctactgttttctccacttttcagatgttaatgagtgtgaaaacaattctatttgtggtgctgggtccacatgcaagaatacagaaggtagctatcgttgtgactgcaatttcggccaaagacgtgacaatagttctgataacatgggtaattgtgaacccatattttccagagctgccatagcagtcataggtgaggttcaatacatgaatgcaatgttgattgaaatttgcagcatgccatacattccacatataatatataatgctctaattacatgcagttctgcattccatgtatacaccatatttgcattgcactacattcaacttgaagctcaacattgaagtgtgaaaacataattatttccagatagaccatggctgtgcctaaatgttatcttttcgcatgagcatagaccatgtggttgtgcctaaattatcttttcacgtgagcaatatatatggactacgcaattgcatgaatatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0220300, RefSeq:Os04g0220300