Os09g0567000

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Revision as of 07:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0567000| Description = Conserved hypothetical protein| Version = NM_001070493.1 GI:115480728 GeneID:4347883| Length = 2378 bp| Definition ...")
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Gene Name

Os09g0567000

Description

Conserved hypothetical protein

Version

NM_001070493.1 GI:115480728 GeneID:4347883

Length

2378 bp

Definition

Oryza sativa Japonica Group Os09g0567000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23462750..23465127

Sequence Coding Region

23462932..23463113,23463604..23464379,23464458..23464963

Expression

GEO Profiles:Os09g0567000

Genome Context

<gbrowseImage1> name=NC_008402:23462750..23465127 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23462750..23465127 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcaaatgggcgtcatggacgcttccctgtgtcctcctttccacggccggtccgtcgacaaggggacgcggcgcaggccaagatgggtactcctcgacaagctcgcctacttcgccggcgccgacgtccgcaacgccaccactgctacttccaaaacaagggagggccatgaaatccaggtgaccctgtgcaccgccgcccagccgcagctcgtctcctacgtgtgcgtccactctcccaccctcaatcctgcatccgatgactacgccatggagccccagatcatcgccgcacacgatgacctcctcctcatccgcctcatcctcggcagaggtaacaggtttactgtatccctcgccgactacttcgtttaccaggcctccattgctgatgatatcccgccgtctctcacgcgcatcacccatcccggccctatgatcaccttcactaaccacgaggtcgccatcctgcactacatccctgaggacacccaccaccacccgtataggccaccaggggaatacaagctccatctctaccactcccacactcagcaatggaccaccacccacttcaaccttgcggcaacaatgccagatctctctcccttccaccatcgcacaaccaacgtcatcaacctcactcaccaatctcctggtctcatggctttcgtcgacctctggcagggcctcttgctcatcaatgtgcttgacaaggtacagcctgccgcacctcgctacatcccattgccaccaccgctcaagcagggtaaagtcatttccggcagagtcgacccaacagatgttcgtgacattgccgtcgacgcaaaaggtcacatcaactttgttgagctggaggtcgatgctattcaacacgagtcggatagaaccggttacatctctcagggctggacggttgccaaatggagctgcagtaatactgaatccgacgattgctgctggcacatggactgcaagctcaacgcttctgacatctctcatctgatgcctcctgagctacccaactactgtcacccaaccccaaccttggagagactccacataggtcatcccttgctcagtttggacaacaatggcgatgttgtttacttcatggccaaggtcgaccaccgtgattacaaggcatgggtcattcctgttgacatgaggaaaaggctcatacatgaaccagctgtttttgagggtgctccgcgtactcttggcataggttccaccttcatacaaaccaccatctccaactatccacaacctgctccaggtaaaaagagaaaacagaaacagcctgggatgttgctgggatcctcaagcaaaaggaagtccgaaactccctatttgacaaatgtggtgctgccactgccaacgaggcacggtgtgcaaaaacaaccggatgcggaaggaggtagcatggaagctgaattttcagataatatgttattataa</cdnaseq>

Protein Sequence

<aaseq>MAQMGVMDASLCPPFHGRSVDKGTRRRPRWVLLDKLAYFAGADV RNATTATSKTREGHEIQVTLCTAAQPQLVSYVCVHSPTLNPASDDYAMEPQIIAAHDD LLLIRLILGRGNRFTVSLADYFVYQASIADDIPPSLTRITHPGPMITFTNHEVAILHY IPEDTHHHPYRPPGEYKLHLYHSHTQQWTTTHFNLAATMPDLSPFHHRTTNVINLTHQ SPGLMAFVDLWQGLLLINVLDKVQPAAPRYIPLPPPLKQGKVISGRVDPTDVRDIAVD AKGHINFVELEVDAIQHESDRTGYISQGWTVAKWSCSNTESDDCCWHMDCKLNASDIS HLMPPELPNYCHPTPTLERLHIGHPLLSLDNNGDVVYFMAKVDHRDYKAWVIPVDMRK RLIHEPAVFEGAPRTLGIGSTFIQTTISNYPQPAPGKKRKQKQPGMLLGSSSKRKSET PYLTNVVLPLPTRHGVQKQPDAEGGSMEAEFSDNMLL</aaseq>

Gene Sequence

<dnaseqindica>2015..2196#749..1524#165..670#attgctcttctttccccttcctcctcggcctcggcgggcggcctccgataccgatacgccgtcggagtcgattccgattgcgattgaaggtctgttcttctatttattatagtatatatagatccagtcggctgctgcgttgaaaaccaggagaggatcagatcatggcgcaaatgggcgtcatggacgcttccctgtgtcctcctttccacggccggtccgtcgacaaggggacgcggcgcaggccaagatgggtactcctcgacaagctcgcctacttcgccggcgccgacgtccgcaacgccaccactgctacttccaaaacaagggagggccatgaaatccaggtgaccctgtgcaccgccgcccagccgcagctcgtctcctacgtgtgcgtccactctcccaccctcaatcctgcatccgatgactacgccatggagccccagatcatcgccgcacacgatgacctcctcctcatccgcctcatcctcggcagaggtaacaggtttactgtatccctcgccgactacttcgtttaccaggcctccattgctgatgatatcccgccgtctctcacgcgcatcacccatcccggccctatgatcaccttcactaaccacgaggtcgccatcctgcactacatccctgaggacacccaccaccacccgtacgccctcagaccgcacaaccccctcagcagcagcagcaaacaacactatatcgtcaccgcgttttctgtcaacaggtataggccaccaggggaatacaagctccatctctaccactcccacactcagcaatggaccaccacccacttcaaccttgcggcaacaatgccagatctctctcccttccaccatcgcacaaccaacgtcatcaacctcactcaccaatctcctggtctcatggctttcgtcgacctctggcagggcctcttgctcatcaatgtgcttgacaaggtacagcctgccgcacctcgctacatcccattgccaccaccgctcaagcagggtaaagtcatttccggcagagtcgacccaacagatgttcgtgacattgccgtcgacgcaaaaggtcacatcaactttgttgagctggaggtcgatgctattcaacacgagtcggatagaaccggttacatctctcagggctggacggttgccaaatggagctgcagtaatactgaatccgacgattgctgctggcacatggactgcaagctcaacgcttctgacatctctcatctgatgcctcctgagctacccaactactgtcacccaaccccaaccttggagagactccacataggtcatcccttgctcagtttggacaacaatggcgatgttgtttacttcatggccaaggtcgaccaccgtgattacaaggcatgggtcattcctgttgacatgaggaaaaggctcatacatgaaccagctgtttttgagggtgctccgcgtactcttggcataggttccaccttcatacaaaccaccatctccaactatccacaacctgctccaggtaataattgatgttttacagcatcgtgcggtacctagctgtgtggttacttgcataaatcactatagaggaggacgatgcaaactattttagcacatataagaaaacatttttcaaaataaggggtatgcatgcatgaggttccctgattagtctgagattggataagaatgtgatattgttgttgctagtagtttctcaggtgcttgtgccactacttaggtttagtggaactataatttcgctttgtctttcaattgtcttgcaaagaggggcccaaaggaaaataacaatgtgacttatgctttaataagagtttgtatagcttggctgggtgttattattgtatttcagaactataatttatgccattatctgcccacattttcagcggtgatttgtgtgggaagggtaaattaatattctatagttgctataaattagttcttggcaccttttgttatctaaaagacggttttatcgggtgcaggtaaaaagagaaaacagaaacagcctgggatgttgctgggatcctcaagcaaaaggaagtccgaaactccctatttgacaaatgtggtgctgccactgccaacgaggcacggtgtgcaaaaacaaccggatgcggaaggaggtagcatggaagctgaattttcagataatatgttattataataagctgggatatgagtaatagtggtaattatcatattttattgatatagtgtgatcccgtatcaagactatgatccctcggttattctctcctatgtcgtgcttgtatgtgtaagggacgacctgaatgaactcagttcagacatttttctgtcctatctatgtggtacacttgttttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0567000, RefSeq:Os09g0567000