Os04g0226340

From RiceWiki
Revision as of 11:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0226340| Description = Leucine rich repeat, N-terminal domain containing protein| Version = NM_001186873.1 GI:297722876 GeneID:9268402| Len...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0226340

Description

Leucine rich repeat, N-terminal domain containing protein

Version

NM_001186873.1 GI:297722876 GeneID:9268402

Length

1864 bp

Definition

Oryza sativa Japonica Group Os04g0226340, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:8496634..8498497

Sequence Coding Region

8496634..8496892,8498062..8498497

Expression

GEO Profiles:Os04g0226340

Genome Context

<gbrowseImage1> name=NC_008397:8496634..8498497 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:8496634..8498497 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcctgcaattctgaacctttcaagctcttcttccttctctccacaacatgccattgttctcctcgtccatctaatcatcttactttcctgccatgctgttaaacaatcagctgcaagatcagttaactattctgagatggaccggcaagctctgctatccttcaaggccagcacctcctctgacccagtcggtgtcctgcactcatggagcaccagctcactcgacttctgcaactggagcggggtcagatgtggtgatatccctgggttattaggtactggaagcaaatctcttagagttgtcaatcttgccttcaacagccttgctggaggtatccctcattccttagcatctagctcatcacttacagtgctaaacctgacaaataatttgttctttggaacaatccctgccagtttgtttaatggctcatctaatcttgccatcattgatcttcgaatgaatgcattctctgggcctataccaaatttctataagatgtctgctctccaaattcttaaccttgcacaaaacaatctttctggaagcattcctccatctctagggaaagtttcttccatcaatctcatatctcttgagatgaacaacttagaaggatcaattccagagactttgagtaatattaagaaccttagcatgctgagcttaggctacaatatgctgacaag</cdnaseq>

Protein Sequence

<aaseq>MAPAILNLSSSSSFSPQHAIVLLVHLIILLSCHAVKQSAARSVN YSEMDRQALLSFKASTSSDPVGVLHSWSTSSLDFCNWSGVRCGDIPGLLGTGSKSLRV VNLAFNSLAGGIPHSLASSSSLTVLNLTNNLFFGTIPASLFNGSSNLAIIDLRMNAFS GPIPNFYKMSALQILNLAQNNLSGSIPPSLGKVSSINLISLEMNNLEGSIPETLSNIK NLSMLSLGYNMLT</aaseq>

Gene Sequence

<dnaseqindica>1..259#1429..1864#atggctcctgcaattctgaacctttcaagctcttcttccttctctccacaacatgccattgttctcctcgtccatctaatcatcttactttcctgccatgctgttaaacaatcagctgcaagatcagttaactattctgagatggaccggcaagctctgctatccttcaaggccagcacctcctctgacccagtcggtgtcctgcactcatggagcaccagctcactcgacttctgcaactggagcggggtcagatgtggtatgactcatccgcttcgtgttacttcactcgacttaaattctcgtcagctgaatggcaatttatcatcttctctggctaatcttacttcaataactcaattagatctttctaacaatcaattgttgggaagcatcccgaaggaattaggtacacttcagtatctacagtctctgatgcttgcaaattgttgagattatagacatataatgatttaatctattccataaatgaatcatgacattacagatgaaaactagcatgaacgcatcattagatctacacatgtaaactacacagtataacatgaacagatcaaatatgcgcaacatattgaacacgtaccgaggtgatggaaagaccggctgcttggtcgaaacttttcgcaagtgtctacgaaggcacgaaacacgcgagcgaagaggaaggcgagccgtcgcgaacgaacagggagcagtcgcgcgaagcgcttcccaaaaaccttattgccgccttctcccggtgcagaacgtcgaaggcagaggttccggagacctgctctcccgatcgccggtgcacgccggcgagcgggatggagtagtctacgagcgacggcgcagtacagagtaggaggcaaaccctagattgattttgcgtatctattgcgtgaagacggcgggtcggtttatatagagaagggtcgcttgatcagggcgcccgcacgatctctactgcgcgtaaccgaaccggataagtcgcgcgtaacttatccggactccatgccgtttgcacgcaccggatttttcggaacgtttccaaaacaaaaacgaatctgaatttgcagcaaaacaaaactgcaaaaggaggctgcatctgcgcaagggtgaggagccaatttttcggaccattcgacgcgtacgtcgtgcacgcgcgccgcctgccctgccctgccgggccaggcgagcgagcgcgcgcgtgtttcccctcttctctccaccacacatgcttcaagtgactaggagggcatcctcccttttaaggaggtccccctctcctagaataagcaaggtggtactaaactccacatgcatgccatcccatgagatgggcttttgtgattttccaaagaattaatcttcgagtgggctaaggcccattcattaattccaacacaaataacacaattgtaggtgatatccctgggttattaggtactggaagcaaatctcttagagttgtcaatcttgccttcaacagccttgctggaggtatccctcattccttagcatctagctcatcacttacagtgctaaacctgacaaataatttgttctttggaacaatccctgccagtttgtttaatggctcatctaatcttgccatcattgatcttcgaatgaatgcattctctgggcctataccaaatttctataagatgtctgctctccaaattcttaaccttgcacaaaacaatctttctggaagcattcctccatctctagggaaagtttcttccatcaatctcatatctcttgagatgaacaacttagaaggatcaattccagagactttgagtaatattaagaaccttagcatgctgagcttaggctacaatatgctgacaag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0226340, RefSeq:Os04g0226340