Os09g0567300

From RiceWiki
Revision as of 07:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0567300| Description = Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase)| Version = NM_0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0567300

Description

Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase)

Version

NM_001070495.1 GI:115480732 GeneID:4347885

Length

3948 bp

Definition

Oryza sativa Japonica Group Os09g0567300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23476325..23480272

Sequence Coding Region

23476543..23476596,23476824..23476895,23477501..23477552,23477673..23477753,23477935..23478053
,23478149..23478368,23478542..23478660,23478752..23478877,23479127..23479267
,23479808..23480131

Expression

GEO Profiles:Os09g0567300

Genome Context

<gbrowseImage1> name=NC_008402:23476325..23480272 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23476325..23480272 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggagaagcacttcaagtacgtcatcctcggcggcggcgtcgcagcgggatatgcggcacgggagttcgccaagcagggtgttaagccaggggagctcgccatcatctccaaggaggccgtggctccttatgagcgccctgctctcagcaagggatacctctttcctcagaatgctgcaagactcccaggatttcatgtgtgtgtcggcagtggaggagagaggcttttgcccgaatggtactcagagaaaggcattgagttgatcctgagcactgaaattgtcaaagctgatcttgcctccaagactttgactagtgcagttggagcaacctttacatatgagattttgatcattgcaactggctcctcagtcatcaagctatcagattttggtactcaaggagctgattccaacaacattttatatctaagggaagtagatgatgctgacaagctggttgcagctatccaagcaaagaagggtggaaaggcagttattgtaggaggaggttacattggtctagaacttagtgctgcattgaagatcaatgattttgatgtcacgatggtgtttcctgaaccttggtgcatgcctcgtctcttcactgctgatatcgcggctttctatgagagttactacactaacaaaggagttaagatcgtgaagggtacagtagctgttggttttgatgctgatgctaatggtgatgtcacagcagttaacctgaagaatggcagtgtgcttgaagctgatattgttgttgttggtgttgggggcagaccgctgactactctctttaaaggtcaagttgctgaggagaaaggtggaattaagaccgatgctttctttgaaacaagtgttcctggagtctatgctgtcggtgatgtggccaccttccccatgaagatgtacaatgagttgaggagagtggaacatgttgaccatgctaggaagtctgcagagcaggctgtaaaggcaatcaagggaaaagagtccggcgagtccgttgtggagtatgactatctgccatacttctactcccggtcattcgacctgggatggcaattctacggcgacaacgttggcgacaccatcctgttcggagacagtgacccgacctctgccaagcccaagttcgggtcctactggatcaaggacggcaaggtgttgggtgccttcctggagggtgggtcacctgatgagaacaaggccattgccaaggtcgcgaaaactcagccgcccgttgccaacatagaggagctcaagaaggaaggcctccagttcgccagcaaaatatga</cdnaseq>

Protein Sequence

<aaseq>MASEKHFKYVILGGGVAAGYAAREFAKQGVKPGELAIISKEAVA PYERPALSKGYLFPQNAARLPGFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLA SKTLTSAVGATFTYEILIIATGSSVIKLSDFGTQGADSNNILYLREVDDADKLVAAIQ AKKGGKAVIVGGGYIGLELSAALKINDFDVTMVFPEPWCMPRLFTADIAAFYESYYTN KGVKIVKGTVAVGFDADANGDVTAVNLKNGSVLEADIVVVGVGGRPLTTLFKGQVAEE KGGIKTDAFFETSVPGVYAVGDVATFPMKMYNELRRVEHVDHARKSAEQAVKAIKGKE SGESVVEYDYLPYFYSRSFDLGWQFYGDNVGDTILFGDSDPTSAKPKFGSYWIKDGKV LGAFLEGGSPDENKAIAKVAKTQPPVANIEELKKEGLQFASKI</aaseq>

Gene Sequence

<dnaseqindica>219..272#500..571#1177..1228#1349..1429#1611..1729#1825..2044#2218..2336#2428..2553#2803..2943#3484..3807#gctcgctcgtgctggcccacatatcagtgtatgcacatagagtgggtgggaatctccatccgtttgggaacacacaacacaacaactaccacccccactccgctccttccttccttcccgcatttggatttacccccaaatcttctccaagtccaatcgacctcatttcattcgattcatcgatcgctcggcgcggcttagggtttttggcggcagcgatggcgtcggagaagcacttcaagtacgtcatcctcggcggcggcgtcgcagcggtctgtgccctctctcttttttcgcttgcgcctcccaaatttgcaaatcaccttccttccgtccttctcgccctgccgccctgggaggggagtaggctgcgggagttcactgcaagatcgatgtgggattcattcgcttggatccttttatttgatcttggtctgttccggatctcgtcgaaagtacggtttttcctgttcctaatttctctctgaatattttgcagggatatgcggcacgggagttcgccaagcagggtgttaagccaggggagctcgccatcatctccaaggaggccgtatgctctctttctctctcacacacatacgcgcgcgcgcgggttgacacacaaaatgctctcttctgctctctctctttcaataggttgttcaggtgctccatatccataactgtagtacaccttcaatcgagttaagatgtctagtatgccagttttttgttatccacaaagcataacaatggcaaatgagttgtgcttatgcaatagttgcatacatcagtatgttagtggcaggcctcaactattatttgtttgctaattactgaatccacatgtttgtactaaatcttctgttgcctaggtacttttacttactggaaccatacctgttcttgttgtaagccacttgtttaagcatgtcgcaattaaccaaccttcaatctattgctggaattttgcctacaacaatgctttgctaaaaagaaaaactttgtattatggaagttgcttctgagggccaaaagaaacaattcttgtaaagccattttggcacagcaagaaatagtcctaatttgccctttgcaagttctgtcattctgtcaatttttacttgcttgttcaccaacacagcattgtgtttcttatcaaaagttctctttcaggtggctccttatgagcgccctgctctcagcaagggatacctctttcctcagagtaagtccttaacttaccgtgttctgccttttcgtgtctgacctgtgccagctctatgtcacatgtggattgatcaatttgtacgatcaaagtaacaccatttgcattctctgcgaatagatgctgcaagactcccaggatttcatgtgtgtgtcggcagtggaggagagaggcttttgcccgaatggtactcagagaaaggtattgactgccattttgctttctgcaccatatcatcttttaatgatttatttgtcattgttgaggttaattaccatcaatttgaaattcttatttttgctcaccttagtggaaatacgtcatgtaatgatttttttttattctaagcatactcctgaatcatgattgcatctgttggcaggcattgagttgatcctgagcactgaaattgtcaaagctgatcttgcctccaagactttgactagtgcagttggagcaacctttacatatgagattttgatcattgcaactggctcctcagtatgttgtgaactgtgaaatttgtttaatatcggctcattgctgtcattactatcacttgttatttacatgctctttttttatccgcttgtcaggtcatcaagctatcagattttggtactcaaggagctgattccaacaacattttatatctaagggaagtagatgatgctgacaagctggttgcagctatccaagcaaagaagggtggaaaggcagttattgtaggaggaggttacattggtctagaacttagtgctgcattgaagatcaatgattttgatgtcacgatggtgtttcctgaaccttggtgcagtaagtgtcaccactcatattttcgctaaccactgttcaactacctactacgcatcagatgaaaagaatcagttttgcccatacgattgacatgcagttatgatgtgaaacgaacttatagtggaaactttcgtgatgatgggaatctgacattgtaaaatatcttcttgtagtgcctcgtctcttcactgctgatatcgcggctttctatgagagttactacactaacaaaggagttaagatcgtgaagggtacagtagctgttggttttgatgctgatgctaatggtgatgtatgtacatcttccaaatccaaaatagctctgtagctctcagtgtgaatgcaaatgactgtctgctttccatcggttccctatttactaggtcacagcagttaacctgaagaatggcagtgtgcttgaagctgatattgttgttgttggtgttgggggcagaccgctgactactctctttaaaggtcaagttgctgaggagaaaggtggaattaaggttagtttgcttttaacctgtaggcttgaccacagaaggtgctagggatgtttctatcaaagaaacagtgtgtaaacaactggacgtttctttatcaaaaaacagcagctgtgcatttgctatttttcttttttgtgcaagcaactcgtttatagcatttggcccatcttgattgcattccttgaaacaattgagcatgtgcattattgtttataccttaatatctggcacgcccaaaattgtatgcagaccgatgctttctttgaaacaagtgttcctggagtctatgctgtcggtgatgtggccaccttccccatgaagatgtacaatgagttgaggagagtggaacatgttgaccatgctaggaagtctgcagagcaggctgtaaaggtgaggccattccacttgtgtttctctgaaatacagtagttgtgacgactaacaccacatagtggcctgcacttggatctgacttgatagtgatctgagttaagcaattattgaattgctcggaaaaccaccaaatgcttggtgttcatgagtatccctgattagcatggtagaatttgatcactgaaaaattctttgcactgtcattcaataatgatttgaatatattgcatgcaagaataacgttaaactggacgatgtaatgtattgtcacatggaatagaatgatctaatgcatagtcatctgataatgtattatgaaatattgaaattgcactaaagaatagtgcaaactttgtgttaatttctttgagttgtctttgcgagcagtgaaatgtcaaaaccttggagttaccaaaccacttggaatccaaaaacttcgcttgtgttgattctgattaccaacaggcaacagttgtggctacttaactcggaatagggttatcatatcttagcttgaaccctgcatctttgtttcaggcaatcaagggaaaagagtccggcgagtccgttgtggagtatgactatctgccatacttctactcccggtcattcgacctgggatggcaattctacggcgacaacgttggcgacaccatcctgttcggagacagtgacccgacctctgccaagcccaagttcgggtcctactggatcaaggacggcaaggtgttgggtgccttcctggagggtgggtcacctgatgagaacaaggccattgccaaggtcgcgaaaactcagccgcccgttgccaacatagaggagctcaagaaggaaggcctccagttcgccagcaaaatatgagatttttgtagttttgatgtacatttccacatggtactccccctattggttttctgattgtgatgcgtctgtactctgtactcctcttaaatatgggcacttgctatagctgctgagatttgaataaagaagttttctact</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0567300, RefSeq:Os09g0567300