Os04g0243400

From RiceWiki
Revision as of 11:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0243400| Description = Conserved hypothetical protein| Version = NM_001058834.1 GI:115457397 GeneID:4335290| Length = 2673 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0243400

Description

Conserved hypothetical protein

Version

NM_001058834.1 GI:115457397 GeneID:4335290

Length

2673 bp

Definition

Oryza sativa Japonica Group Os04g0243400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:9314089..9316761

Sequence Coding Region

9314278..9314775,9314851..9315159,9315524..9315943

Expression

GEO Profiles:Os04g0243400

Genome Context

<gbrowseImage1> name=NC_008397:9314089..9316761 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:9314089..9316761 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcctgcaaatgcggaggacagtgtcgccaaagccctacggtaccgcgatcaattggtaagaaaccgaacccagtccagaggaatccatggcgtggttgaagaagatgaaggagatggccatcattgcttgcccgaactccatggcagcaattcgttccaagtggtggaggatgcatcctcggctgcacgtcgtgggcgccgcggcgggcatgatggtggacgtgggaagagacccaccacacaatcgattagcagtgcaccatcctcggcagcacgtggtggtcgaccgaggaaggcgccatacaagcagccacggccatcgagcagtggagctgctaccggggtaacggccagtgcagacaatctctgcgcagaaggatttgtcgacagtgagacatgtaatggaagtggaatgaaggagtttgacaaagcagaatggtctaccacaaacactaggatattttgtgaactatgcgtagaacaaatcgaagccggcaataggcctatcgggataatgactactagggggtaccagaacattgctgtcaagtacttgcagaaaacagggctacgacacagcaagatgcaattgaagaaccgatgggatatactaaaagccttgtatagcttttggcttggcctcctcaaagatacagggcttggatgggatagtacacaaggaacagtttcagcaagtgataaatactggaagcaagtcactaagggtcattctgaatggaagaagctacaacatggtcccccggattgtgaagatttattgagtcaaatgtttgctgaggttgctgttgatggttcttctgcttgtgcacctggagaggatgttggaggggctggtgtacaaagccttgatgacacaccagtggacatctcattgcatagatacacaacgaataacaaatcagtgaaacgagggtgtattaccactgaaaatagtccactgaagaaggttaagaaccccatggttaaggtgatgaagaatattcagtccactttggacaccaattgtagtattgccaacaaggtgatgcaaggtgaatttaggtacaactctattaaggaagtgatggacttggtagtggagtgtggggcagcagaaggaagtgccgagcatttcatggctacgcaattatttgtgaaatcttttcacatcgtgacgtgttcaagacttttaccaccaaggagggaaggctcagttggttga</cdnaseq>

Protein Sequence

<aaseq>MEPANAEDSVAKALRYRDQLVRNRTQSRGIHGVVEEDEGDGHHC LPELHGSNSFQVVEDASSAARRGRRGGHDGGRGKRPTTQSISSAPSSAARGGRPRKAP YKQPRPSSSGAATGVTASADNLCAEGFVDSETCNGSGMKEFDKAEWSTTNTRIFCELC VEQIEAGNRPIGIMTTRGYQNIAVKYLQKTGLRHSKMQLKNRWDILKALYSFWLGLLK DTGLGWDSTQGTVSASDKYWKQVTKGHSEWKKLQHGPPDCEDLLSQMFAEVAVDGSSA CAPGEDVGGAGVQSLDDTPVDISLHRYTTNNKSVKRGCITTENSPLKKVKNPMVKVMK NIQSTLDTNCSIANKVMQGEFRYNSIKEVMDLVVECGAAEGSAEHFMATQLFVKSFHI VTCSRLLPPRREGSVG</aaseq>

Gene Sequence

<dnaseqindica>1987..2484#1603..1911#819..1238#ctctcccggtcgcgccgccatctcctctcccaatcgcgcgcatccgacctccttctttcccaatcgcgccgccttctccacccccggcgcgcgagcagccttctccacccccggccgcgccgccgcgttcccaactccatgtcccgtcttcttccctgaaccgcgccaccgccgtccctgccctcactccgtaccccgcctttgtctccaggctgcggcgacgcggccccaactcctggatgcagtactctctctctttctctctctcaacactaattgatttgtttgattttcacactcagaaatttgtcccatgccatggaactgaagaaattgaatttccctttatgttgcttttcatcacatgattttacatatgtgtgtatcacctgagagcacattcatttgtaggttgctatatgtgaaatttcttaaacactgaatggatgatattttctactgtactgaatgaatgaatggatgaaattgatcaaacactgaattttcttaatgtactgcacgcaggtgtctcacagctgatgatgtaatcaggaaaattactgaattttttcaatccactgggacccgacgatttgtcacacaacggcaggtgcgtttcaacgggattgaacggcgaagttacatgcaaatcagcattttatttgggcagacaggagcataggaagtgctagttgagattaggtagatttatcagttagatttgctttggattaggtgcttatctattgctagctcttgctcaaattacagaacgacacaatgctttttttttccatgcagtgagacaatcagtggagatggagcctgcaaatgcggaggacagtgtcgccaaagccctacggtaccgcgatcaattggtaagaaaccgaacccagtccagaggaatccatggcgtggttgaagaagatgaaggagatggccatcattgcttgcccgaactccatggcagcaattcgttccaagtggtggaggatgcatcctcggctgcacgtcgtgggcgccgcggcgggcatgatggtggacgtgggaagagacccaccacacaatcgattagcagtgcaccatcctcggcagcacgtggtggtcgaccgaggaaggcgccatacaagcagccacggccatcgagcagtggagctgctaccggggtaacggccagtgcagacaatctctgcgcagaaggatttgtcgacagtgagacatgtaatggaagtggaatggtatgtctctcttatggttgtatttattacatatttgatttataattcttgtcacaacagtgagaaatgtcatgtggacatataagagtccaaaaaaatcttgactagtgcatgggaagaagcaaacctggtttatgactgttgttaataatgcttgtattgctctgttctcagtgctaaagggtaggtcgtattgacaaataataaagatataattattaactagtgttcatatctaaaagctataataaaatactattcatgtgctctggagctctaaatagtcatgtttttttatagttagagctatagatgtacgacaacattgaaaactgaatctcaatgtgtttgttctatcaaatagaaggagtttgacaaagcagaatggtctaccacaaacactaggatattttgtgaactatgcgtagaacaaatcgaagccggcaataggcctatcgggataatgactactagggggtaccagaacattgctgtcaagtacttgcagaaaacagggctacgacacagcaagatgcaattgaagaaccgatgggatatactaaaagccttgtatagcttttggcttggcctcctcaaagatacagggcttggatgggatagtacacaaggaacagtttcagcaagtgataaatactggaagcaagtcactaaggtaataatccttttcatgaaattgtttttagtgttttcaataattagtactcacggcctgttcctttatttctagggtcattctgaatggaagaagctacaacatggtcccccggattgtgaagatttattgagtcaaatgtttgctgaggttgctgttgatggttcttctgcttgtgcacctggagaggatgttggaggggctggtgtacaaagccttgatgacacaccagtggacatctcattgcatagatacacaacgaataacaaatcagtgaaacgagggtgtattaccactgaaaatagtccactgaagaaggttaagaaccccatggttaaggtgatgaagaatattcagtccactttggacaccaattgtagtattgccaacaaggtgatgcaaggtgaatttaggtacaactctattaaggaagtgatggacttggtagtggagtgtggggcagcagaaggaagtgccgagcatttcatggctacgcaattatttgtgaaatcttttcacatcgtgacgtgttcaagacttttaccaccaaggagggaaggctcagttggttgaagaggtggtgcatgaaggaaggcttggagtaggatagtgctaattatttatatgcatgaacttatcatctttgtttaaattttgtgagacaatatgtattagcaagacaacttctatttatatgcatgaactaatgaattgcccatgtaatatgacgctttaatttgaatgcatgaacttttatgtgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0243400, RefSeq:Os04g0243400