Os04g0244500

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Revision as of 11:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0244500| Description = Protein of unknown function DUF171 family protein| Version = NM_001058838.1 GI:115457405 GeneID:4335294| Length = 70...")
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Gene Name

Os04g0244500

Description

Protein of unknown function DUF171 family protein

Version

NM_001058838.1 GI:115457405 GeneID:4335294

Length

7086 bp

Definition

Oryza sativa Japonica Group Os04g0244500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:9399062..9406147

Sequence Coding Region

9399104..9399370,9399438..9399638,9399726..9399792,9401667..9401725,9402866..9402944
,9403429..9403547,9403624..9403703,9404733..9404802,9405553..9405630
,9405711..9405767

Expression

GEO Profiles:Os04g0244500

Genome Context

<gbrowseImage1> name=NC_008397:9399062..9406147 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:9399062..9406147 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaactccggagacgccgaggcagcagcggcctccaagaaggcccggtgcaagaaggagaagaaaaagaagcgaaaggacgactgcggagccgcagaggcttcagcggctgacgaagaaatcgtccacgacaagaagaggaagaagcagctgcaacagaagaagaacggagatgacgtggcggttccgaatcggaagaccacggtgagcatcgccgtcgccggatccatcatcgacaacgcccagtccctcgagctcgccaccctcctggcaggacaaatcgcccgcgcggcgaccgtcttccgcatcgacgaggttgtggtcttcgacagcaattcctcagtggagaacagcggcgatgacgtagagagtggcgcgcgcttccttgttcgcatcctacagtatctggagactccacaatacctgcgccgacgccttttcccgatgcacaacaacttgaagtttgtggggttgctgcccccactcgatgcaccacaccatttgcgcaagcatgagtggtctgaatttcgtgaaggcgtaacattggatggggatcgttcaatggggacatttgttgatgtcggattgagtaagaatgttctggttgagcaaatgctagaaccagggaagagagtaactattgccatgggtaccaatcgtgacattacaacagcttgcaaaaggaaaattgtttccccttcctctcccagggatgaaatggaattgtattggggctataaggtccggtatgcttcaaatttgggtggagttttcagtgattcaccatacaaggaaggatatgattatatcattggtacttcagagcatggaaagatcattagttcatctgagctgatcttaccttcctttaggcaccttttaattgcatttggtggattggctggtctagaagaatgcattgaagaagatagaaatttgaagggtaaaggtgtagatgatgtatttaatacctatttgaatacatgtcccagtcaagggagcagaacaataagaacggaggaagcacttctcatctctctccaatacttccaagaccccattaggcgagctggatag</cdnaseq>

Protein Sequence

<aaseq>MNSGDAEAAAASKKARCKKEKKKKRKDDCGAAEASAADEEIVHD KKRKKQLQQKKNGDDVAVPNRKTTVSIAVAGSIIDNAQSLELATLLAGQIARAATVFR IDEVVVFDSNSSVENSGDDVESGARFLVRILQYLETPQYLRRRLFPMHNNLKFVGLLP PLDAPHHLRKHEWSEFREGVTLDGDRSMGTFVDVGLSKNVLVEQMLEPGKRVTIAMGT NRDITTACKRKIVSPSSPRDEMELYWGYKVRYASNLGGVFSDSPYKEGYDYIIGTSEH GKIISSSELILPSFRHLLIAFGGLAGLEECIEEDRNLKGKGVDDVFNTYLNTCPSQGS RTIRTEEALLISLQYFQDPIRRAG</aaseq>

Gene Sequence

<dnaseqindica>43..309#377..577#665..731#2606..2664#3805..3883#4368..4486#4563..4642#5672..5741#6492..6569#6650..6706#gttagtcccccctacgcctccgccgccgccgccgccgccgcaatgaactccggagacgccgaggcagcagcggcctccaagaaggcccggtgcaagaaggagaagaaaaagaagcgaaaggacgactgcggagccgcagaggcttcagcggctgacgaagaaatcgtccacgacaagaagaggaagaagcagctgcaacagaagaagaacggagatgacgtggcggttccgaatcggaagaccacggtgagcatcgccgtcgccggatccatcatcgacaacgcccagtccctcgagctcgccaccctcgtcagtatccatcctttctcaccttcccttgctagttcttgcggctctagctcctaccctgtttcagctggcaggacaaatcgcccgcgcggcgaccgtcttccgcatcgacgaggttgtggtcttcgacagcaattcctcagtggagaacagcggcgatgacgtagagagtggcgcgcgcttccttgttcgcatcctacagtatctggagactccacaatacctgcgccgacgccttttcccgatgcacaacaacttgaagtttgtggtgagaccgctgaagaacatgattgcatcatcggcatgttgggtttcctggaggtgctgattgatccgtgtcgcttcttgtatgcaggggttgctgcccccactcgatgcaccacaccatttgcgcaagcatgagtggtctgaatttcgtgaaggtgatctctctcttcttgcagtgctattggtatccacgttgaattgcttttatcgtatatggttggcgaagtcggcatttgttgtgtggggaactaaaatcatgtcacggccatgggtactctagttttctggctatttgctatagagaattcgatctgtagcacagaaacaaggaactaaaatttccgctttcgactggtagcacaggccactcgtttttcttccatccatagcacttccaccaaaactgcagtgcaagacgagtgtttccatgtgaatagggacagaaaatgacaaatttacccttagtcctctctgtattcacacgtgattggttgggttggaccattcctgttcttcatcagttcatgctcgtttggctgggagagcaggcaagcatgcggcggctggcagtttgcgccgtgcgacggcacatgggatcaaggtcgttgatgacagtggcggctaacgactccttcccatccccgaaccccatgatgaactagtttgttgtgtcctgttcaatcattgatttgcaaaaattaaattccataggacaccattgatttgcattgccgagcactgaattcttcacatctctgtctcatcttcttactcaattcctgctgtgcgtgatgaccactggccccttcctctctgattttttttctagagagaaacagggaactgctacgcgtcgacgacaagctgcacctctctgtgttctccatctccataagccacacctatgtgaagacctcatcagcgatgcaaacaccttctccatcggccgcaccccctcctccgctgctggccaccccaccacagccaccaccgtggacaagttcaattagccgaggagcccaagttcatgtttggctaaccaatcacttggacggaaaatgtgacggaagcgctacaaattgaagaaaaactagtggcgtgtgcctctggtcgaatgggggaatgttttgtgctatttttggtactgccattttttctgtgcatagagcgaattttctctttgctataatacactcctaccattattttagtatatcggattgaaataggagagagaaatcaaagtaaatatcacatggccaatgtaatttaacttttttacctaactagaaaaatatgaagtttgtcttcctagatttataggagctatgcgacttacctctcggtctcttgttaatttaggacaagttctagagatctgctactgtttttcggtcaaaaagaaaactaggagaagttgtaaatttcatatttaactagttagggacatctttgaatgaaactatatgtatatgagcacatcaattgaactatgcataagcacatgcagtgtttggtatttcgaatgattcatcatgtttaataattctgtcatgcgtggccatgtctgcaccttttataaatattatatagtatgcccatgaattgtgcagttgttttatctgttcttcgtagctttcagaaattcattacatgcacaatatgcaattcatttgctttggactttatcaattctcgtagttcatgctaaaaggaaaaataaactttatacgctctttgatcctgctgtgttactgaatggctgagctgttggttgtgttaatgtagaattacttcttgggggaggactgcctatcccacatgctcaactttgttaaggcttcaatttagaatggcacccttttgtgcttctcaactaaaaaaaggaacatgagtactaatagcataattggatttgtttcgactgttttttcattcctattttaatgctggtatcggaaaagtttttgttaccacatttttcatgtgtgattcaacagaatgcttacagtagaatgaatttagacaggcgtaacattggatggggatcgttcaatggggacatttgttgatgtcggattgagtaaggtatccaaatttttttcacatactattttttagctcaagtggcttgtgtaattaaatatccgttcagttgtaacctgacggcttagactataaaatatctgttcagttataaacaaaggggttataatatggttattgtccaaacaaactaacccagtgcatgaatcgaataattaattcactaatagaaatgcgtttaaatgcatttaaattctggtttaggtatcagagtacctaaacctaccctaaagtgccgtagggcttcaaaaattgcccttctgggcgttttcctccacgcgcatacccccatacatgggctccctagcaacaatagcgcttaactactgctaggaacacgtatcaccttgctttcccttactccgagaagtcctaccttacccaaggtagtccttctcttacttccggaaagagcaaacactttccttcctttccaaaaaaccaaaccctttccttttcataaacccaactatctttatctttcctttactccgaggaattaacccctgtaaacttagcctaattgaatgaaaaaaagttaagctagtgggtggtgtcataccaaacacataacaaacgagttcatagtttgttattccaacaaaatacttctttttttttttctgtaatataggtttgcttggtgaattttctatactcccagtaaggctgctttcaatatacctgaagctgggccaaaacaaagggcatactgctttttttttttttttttttttttttttttttttttttggcaaggatagcatagcataactgtaagctgtcaaaatgtcagctagatatctttgcaccaaagaggcatgccatggccattacccataactgcatatggggcaagggtaagagaatggtgaaacatgaaaatcagcatgggatagcttcaatgctgatagctgcctggccagagtgctttggcaagtctagcaactttatattgatagttgcatgtctgcctctgagcaaatctttttgtactcaacatgataaacttgattctcagattctgtaatgtatattgtatcatatacacctttgtggatcatgtattagataatgtacgttctcatccaataaacttactataattgtctttcatcacagaatgttctggttgagcaaatgctagaaccagggaagagagtaactattgccatgggtaccaatcgtgacattacaacaggtaaatgatttattcacttgacccaggcttcagatgtggctctattgatttttcttcgtctagaactttttagtatctgaattactcggtatatgttctttaatccatataccctgaagtatccttcctaaccatttgcaatgactggttaaaatctgcaacaactatcaggattttatttctcatatgaataatatagtgcccatgcgttactacagatttcaagtaaaccattctgcttgttctgcagagcaaaatggatggattttttaattatgtaacataaaaacagagtgactattttcagttcacatgtgtgctctttggattcacttcgtaatgcgtcgcttcattttatcattcctgttcactaggcatacttatatccccattcagttattttagctcttgccttctacaacttgaattttgtctgttattttgatattgattaatgacatattgtcatttacttttcatctagcttgcaaaaggaaaattgtttccccttcctctcccagggatgaaatggaattgtattggggctataaggtccggtatgcttcaaatttgggtggagttttcagtgattcaccatacaaggtacaattttctttagctcaatcacatgtagtacagggtaaagagtacttattactaattattttcatatttttaggaaggatatgattatatcattggtacttcagagcatggaaagatcattagttcatctgagctgatcttaccttcctttaggtatattgttttcacttcccttggactaccttcagaattcaattcagttttttccatagttgtttggtctgctgaatgcaaaattttgtttctagatgctatgacataatttatgatgactatttatttattttttgccagtgtctcaggatttttttctatgaataaaaaatgaacatatacaaactgaatgtgattttttttttttttgcattaaacatgtccatttcttttttgttatagggagtgttttgcagactcttactataaaataggccatacaacaatatatgtgatccagtcagatagttcttgaacccagaccagctattgacttggtgatgttactggttaacttattttgatggttccagtgatttgattgttgaacagctggttcatcattttatatagtttacataatttgcctctggcctgaatttaccagtgtcgagttatttgggtagctgctttttttttttaaccctcattagggtagctgcttttggagccttggtatgaaaaagaaaatagagatatggttaattaggtctttactctatttaaaaaaacaaagcaagtaatcaacaagagttaacacaacacaaatttaagctccataattcagacttcagtgtgcaatgcaatagcagctgctattttgcttatgaggttgctatccagctgctattgcagctgctttgttccaatgcgctatttcgtagcactacctagtcttggtaatggtagtaacccactaccaccattgttgtaactatcacttctatttagaaccttggttataaccacattgtattgctcttaaggggatattttaaactggttttggtggttgaggggtggaagatgtccgtttttattattcagggttgatttctagactcagatgatagtgtatgagaggcaaagtagaatccactctattcttcatcataaactgaaaaatacacaggaccaccattgtgggtgtatggctatcttgtcatttatgagcgcttcattgtacaggcaccttttaattgcatttggtggattggctggtctagaagaatgcattgaagaagatagaaatttgaaggtatcattgcatatgatagtttctaatacgtattttgttagtactaacaaaaaactggtacctatgttgttatttctgacactagacaaaccaggctgaaattatcaaaatacagcagtcaactcagttggaccggtattgtctttgaatatttggtattctttgttaagtactaatgaaaagctgaataaacgaataaaactgaatggtcacagaccaacaatactggctgttcagattctgaagcgaagttaagagatgtggcagagtccaagttctctaactaaaacacgaacttgagaactgatgaaacaaggggtgaaaggaactaatggaaaattttgtaacttcagattggagtacaacaaaaatatgaaaagaagccagggagatcagctctgcatagtagtggtttagttgctagtattttcctgtgtgcctttatgagaatgagaatataggctgctggcttcataccaactaggaaagccacgccaaattgcacctactagaccaccaatccaccatagaccaactgcccaacctacatcatctagtccattctcacttgcaatgtcttgtgttttttaactctcggtaatgggtcagctgagatttgttctataaacttcctagtttatgatatacataacttgattactgtgttagtgtggctaactgctcatactttagtaaatgatggttgttttactgttagtattgttattgaagacacatttccttctgcagggtaaaggtgtagatgatgtatttaatacctatttgaatacatgtcccagtcaagggagcagaacaataagaacggaggtacttgacacttgaaagcttggaaagttcattatttttcagggatttgttcctattttgacagaagcaaacgttttcaggaagcacttctcatctctctccaatacttccaagaccccattaggcgagctggatagcaaatgtgggaacagttgcaaacttaacaattagatgcaaaacgaaaggtgtgctagtgtggttcaattccctcggtggaatatgctcatggtcattatgttccagtgaaaaggcacttcatcttcagtgatctcaacacttattttcgaacacctgtgtttatttcactgaaagagagctttaggcggtcgtttacccatttcaactattgaaatctttttgctgggcaaaccttgggcaggtagattgtttcgtgcctaagagcagctatggacagttgttaaacgcttattgggtagccatgttttagtgaagattgttttctgaccatccaattgcatctatcccaaatcatgatatacatataaattaaatcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0244500, RefSeq:Os04g0244500