Os04g0250700

From RiceWiki
Revision as of 11:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0250700| Description = Conserved hypothetical protein| Version = NM_001058850.1 GI:115457429 GeneID:4335309| Length = 8455 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0250700

Description

Conserved hypothetical protein

Version

NM_001058850.1 GI:115457429 GeneID:4335309

Length

8455 bp

Definition

Oryza sativa Japonica Group Os04g0250700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:9741927..9750381

Sequence Coding Region

9741949..9742256,9742342..9742390,9742493..9742544,9747669..9747823,9749144..9749257
,9750031..9750183

Expression

GEO Profiles:Os04g0250700

Genome Context

<gbrowseImage1> name=NC_008397:9741927..9750381 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:9741927..9750381 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccgccgccgttgccgccgcggccgcgccgctgcggcgttcgctccttccctccctcaacccgagctgtctcttctcctccctcgcgtcctcctcgcaccgcctatctctaccgcgcgccctccgccccgcgggccctttgccctccgatgtcgaagactcggacgattcgaatgccggagacggcgccggcgaggccctcaggaagagccgcaacgacctgaagcgggaggctcgtcgcgccgtgcagtggggtatggacctcgctaagttctcccctctccagatcaagcgcatcctcagggctgcgtcgctagatcgcgaggtgttcgacgctctcatgctcgtgaagagatttggatcagatgtgcgggaaggaaaaaggaggcagttcaactatatcggaagacttctgcgtggtgcacaacccgaattgatggacactctaatccagtattcgaaggatggcgatgataacaggttacttgcattaatgagtgaaaatacattcttgatggaagatgaggaaatagaggacttgccttgcaatgaagaagagggtgacaaagagcatattgaaattgcagatagatggtttgagggcctcctttccaaagacatttcagttactaatgaaatttatgcgatacataatgttgagtttgatcgtcaggaactgcggaagctcgtgaggacagtccacatggtccaagataatatagaaaatgaacatgaagaggaatctaccatgaagcttttgggagcaaagaaacaacttttgtgcttccttcgctccattgctaaggaggcatacgtcaaatcatag</cdnaseq>

Protein Sequence

<aaseq>MASAAVAAAAAPLRRSLLPSLNPSCLFSSLASSSHRLSLPRALR PAGPLPSDVEDSDDSNAGDGAGEALRKSRNDLKREARRAVQWGMDLAKFSPLQIKRIL RAASLDREVFDALMLVKRFGSDVREGKRRQFNYIGRLLRGAQPELMDTLIQYSKDGDD NRLLALMSENTFLMEDEEIEDLPCNEEEGDKEHIEIADRWFEGLLSKDISVTNEIYAI HNVEFDRQELRKLVRTVHMVQDNIENEHEEESTMKLLGAKKQLLCFLRSIAKEAYVKS </aaseq>

Gene Sequence

<dnaseqindica>23..330#416..464#567..618#5743..5897#7218..7331#8105..8257#gcagtcctcaccaccctaccctatggcgtccgccgccgttgccgccgcggccgcgccgctgcggcgttcgctccttccctccctcaacccgagctgtctcttctcctccctcgcgtcctcctcgcaccgcctatctctaccgcgcgccctccgccccgcgggccctttgccctccgatgtcgaagactcggacgattcgaatgccggagacggcgccggcgaggccctcaggaagagccgcaacgacctgaagcgggaggctcgtcgcgccgtgcagtggggtatggacctcgctaagttctcccctctccagatcaagcgcatcctcaggtgcctatccagcctaccttcacatccgattcttggtagtacttcttcgttggagggcacctagtatgtgattcttgtttctcagggctgcgtcgctagatcgcgaggtgttcgacgctctcatgctcgtgaaggtacatcctttgttctggtaatagcttgtatatccgttgttcttgtaatagcttgtatatttgattgcaaatcacgtttttgtctgttttcttgttttgtagagatttggatcagatgtgcgggaaggaaaaaggaggcagttcaactatatcggtatctttacttactgggttaattggatccatgccactgcaaatatgtcaattcaaaaaaatgtcactactattcagtatatcggctacgtggcactgaaaattgtggaaattggatccatgccactccatcacgttttccgtcaaaaatctttattagcccccagctgcacgtgggcccccacctcccttccctctcttctctttcctcttcctctctctccaccaccgtagatgcggcaggaggtgtcgtctccgtcgtctccatcgttgtctcagagaggtcgggccaggctgcgcctgcgttgtcgttgttgtcgagcacctcgtctcggagctggtgagccacgcggtctctgtcaccgttcaagggaggaggaggtggtggtggaggaggcatcaccgacgactgagtacccatcctcgccaccgttgccgaggacctccatgatgcgcggctaaggcagcggcagctagaggggtgcgctatcagcaaggaccctctcctcaattaatccatcgctagtacgctgctctgatggctcgcttcgccgtcgtcgccatcatcgtcaccctcctcgccgtcacggccgctgtgcaggccccgggagcggcccccatcccggcacccaagatggccccgctgcctgctcccccgacgaggtccccggccaccgcttcctccatcccggcaaaggacaagagtccatggtgcaacagtcacaacaatggcagagcaagcaacagtagtcgcggcacgagcaatttcggtggcggtggcaaaagctcatcgtgatagtggcgaggtctcagtccatcgtcatttttggcttgatgggacaagcaacactgcatcagtcggcatggtggacaagcagccgtcacaataacgatcggggacctcgtcggcatggtgggctaaactaagccctttggtttgagaaaaaccgatccttgtttcaccgaggaaaagagagaaattctgtataaattgacaatgctgacttgaattgactaattcagttccaactattccacattaatgggagtacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaagccttattcctattttagcattttggatttcagcacttttaagctccggtttgtgaaggaccagagaagctttctagttatgaatcgggtatagaacccatggggggggggggcttggttacaattccgaatacgctattacatgtttgcgctagtttttgttgtttttgatgtggaaacggtctttctctacccttgggcaatgagtttcgacgtattgggtatatccgtttttatcgaagctttcattttcgtgcttatcctagttgttggtttagtttatgcatggcgaaaaggagccttggaatggtcttaactgaatattcagacaaaaaaaaaaaaggattgcttctcttccagggaagtttcattttcccagaatgtatcctaatttttggcctaattctgatgatcgatttaacctctgatcaaaaagatagaccttggttctatttcatctcttcaacaagtttagtaataagcataacggccctattgttccaatggagagaagaacctataattagcttttcgggaaatttccaaacgaacaatttcaacgaaatctttcaatttcttattttattatgttcaactttatgtattcctctatcagtagagtacattgaatgtacagaaatggcagcagtctcctccgactccgcccactgatgccccagacaccaatgctccctccgcccttgcctcgtctgcggtcacccccaccgcctctgcagtctgcaccgaccggcgctcccaccggcgcccccgcgagctcctctgcattcaccaccaccggtgctcccatctcggggatgaaggaagagatggggaagaaagaagaggaataatggaggaagatagaactgacatgtgggtcccacgtccaggagggtgacggaaaacgtgatggagtggcacggttcaaaattttcaaatttctagtggcgataagggatcgcccaggatcgggtggaaggtcggagaagccagtcttcaggtccatatttttggaaaaactgtgatgtctggagttggtaatgatataggtcctagaaatttggctggctacgttacttataaccgcagaacgagcaatgaatccccaacgacaaacgaacgtgcaacaattcctgcacccgcaactccatcctgcaagttcagtgctccatcagtgttcagtttcatccatcccaaagcaggtcgagcccacttctgaaccacagccgatggcctgaacgacaccttctgcagactctactggtggtattccccgaggcgacctatatccccaccaatgtgatctccattacagatggacaaatctgtttggaaacagagctcttttatcgcggaattagacctgctattaacgttggcttatccgtcagtcgcgtcgggtctgccgctcagttgaaagctatgaaacaagtctgcggtagttcaaaactgggtacctcaagtttatagttctaagctgaagaaatagcctgagtcaacttatcttctttacaacctccaaacaaacagaaagactaacgccgaaagatatgttttgaagagagctccatcgggttgaagccgaattgcagagaatcaagatcttctacctttgtggagggacttgaattattacttctatttacttgatttgctggggaagaaaatcattaaaaaaccactaaggccgggcaagtgcaagtcccgataacgggaagaaatgcctaccaagtgaaagaaagagatcgcaatggtctaagatatagtcagtgaacaataactcagggtagccgatatgctgaatagtagtggtattttttctaattgtcatatttgcagtggcatagatccaattaacccttacttctttcgttgatgctacagttattcccatccattcttttagttgccaactagacattgttatcttttttaaatgaattatttatgagattttgtcatcttgtaatacatatgtaatgtcttctggtagtgtaagttggaaaaattagtggcatatatgagaatggacattcgttagtggcaaaaccaaactttcccctaatatgtccgaagtctaaaagggatcaaatttatttgatggtttgtttcagatctcaagtgcttttgtacactgcttgatctatatttgctgtgtactgcattaatgtcctatgatattagggagtgatttctttagtgcttttgcaacagtactgacttggacaccgggtgttgcaacagaaaacaaattgaatttatagcttatttaatcaattaataagcatttatttagttctagtaatttttcttattgaacgagtaggtgatttttaaaatttgggggagccaatagtgaaatggaggacatgttgaaaagtggtgtaaatagtataaattgtgggcccccagatgtcagtagtaggggtggtgtggggatggacactgcgactactaacatcattattttagaaagattgttaaaaatataactaaaaatatatgtgctcagactgttgccaaataaccagccttttacacatgctcaggttttggcataaggacatgcacacattctttggtcaaattatacttatcctgagtttctgaatacacaagaacttattcttgaataggacttccttttttttttaaatatccttgctgatattatcatcctagcattggaagttgtcatgaccaggctgcacatatgagctttttctctgactgctctcaagttcagctcctgctattcacagcaatcaaccaacaaattaaatagcaagtcttacaaaaaactcccaccaaaacaaccaagctggtctcttataaactgaaggaaaatcaagaaaataagcaccactcttgattccaggaagccaaaaaccagaaatttcctcaagaataagcaccactcttgattccaggaaggtgacttgccgatgtcctccaaaacaaccaagctagtcttttatagggcttgtttggtacagtccaactcctacatttagctccatgagttgggtctggagtggagttgtggagctacctaaacccagctccacaactgtagtttattttgtgagagagccccacccagctccactcccatttttagtggagttgaaactatttggctgagctccagctctaggaggggtggagctggagctggagttgtgccaaacaggcccgtagtctgcatggtctttttggcagctgctaaaaggtgttctgtgttatgttagttccaaaccatggtgtttaaattaaaagtccactaaacctggttcttgttattgcattagcccctaaaaatggtgcttctgctttctgaaatttcaacatgtcaaattgtacctaagcaaagggatttcattgaacttgatattgatttgcctacaaataatatgatttttacgatataaggttgtcgtcgaaaagaaacaacgggataggttctagcatcatcatatcattcagactgccacactatatttgggttagtgatgatataatatcctattgatcggcttttgcatttttctagcgtcactgattgcctagaaggccacgtcttccctgctctagtgcttaggctgaaacctttattctatggcagcacttgtgtcatttggactactagcgatccatctaagcttgagcaattgaaggaaattgctgttggtgcattgtttgtaatgtctaagtcaagagtttactattgatctcaatatgtgccatccaagcttgatgttgcagatttcatcaccaaagcttgggcttgagaacatctcttcaattactctaactcaatgccttaggtcttcctatctccaaactcacatgcatgtaggcccatagtaataagctccagacttcttcaaaaagggaaactctgtaaagaaccaaccttttctgaatgttatgtttttgcattcatgtattcacctagatcaagtaacccttggattcatatatttgatatttattttatgttattatttctttcaggaagacttctgcgtggtgcacaacccgaattgatggacactctaatccagtattcgaaggatggcgatgataacaggttacttgcattaatgagtgaaaatacattcttgatggaagatgaggaaatagaggacttgccttgcaatgaagaagaggtgcatcttatttcttgtccctcaactttagacctgtttatttttgtgcctcagttccaaaaccagctaaatttcgtccctcaaatctgaaaaccaagaaaaacatgtccgtctaaccaataaaccttgttttgtatcacatgagtccaccttggatcctacttatatggttaacctaactcactgtttcttgctcgttcctctttcttgctcttgctatcttcagcaagcatcctgttcttccttgcccaagtgaccagttaggacgcccagatctagccatggcaggcccagattgtgtggtcccactatgtccaggcaagctcactctaggaagttggacaggacttcaacaatctcctcattctttgtgatgcgcatttcacatcgtttcagctgaaccggacccaaaataaaatccatacaatactgatgcgaccatgccaccctgacaccgataggatggattccataggaaacctgataatttgatggcactgtgcagtaggaggatctccaagcggttttggtttgccttgtatgcagcattgcacagcagttctgctctatctgtgccacctgatcttgtaggttctccaattgcagggaagtgatcgtcactttagagcagcatcgcgtcctattgtggttaaggcatgtgacaagtgtcacaggtcttgcttctatcagctgtatgaattgagtagcagggcacatctccttggtatggatgatgtcccttttagtggcgtattggccaactagattaagaacagcagaaagaacactgagaaggaaaaggaggctgactgataggattccattgctgtcctggaaacacaagagcatagttagatactccctcagtcccattttaagcgcagctgtgggtttttgtattcaacatttgaccgtccgttttatttgaaattattttatgattagtaattttattgttattagatgataaagcatgaatagtactttatgtaggacttttttttaaaaaaaagttcataaaattttcaaataaaatagatgatcaaacgttggacacttggatacataaactcatgactgcacttaaaatgggacaaaaatgggacagagggagtactagtagatgcctaattggttaaaaccaagtgagtttttttgaggaagcagggacattctctttggttttggtattgggatgagttttatccttttttatagttctggtcaaaaaacaagaccacttcgaaagtggagcgactagaaatagacttctttgctatagtttaatattacatgctaacgatttgaaattttgaacagggtgacaaagagcatattgaaattgcagatagatggtttgagggcctcctttccaaagacatttcagttactaatgaaatttatgcgatacataatgttgagtttgatcgtcaggtattctctacacttgtttaaacttttcattgtactattttactcgacatataagatatttgcttagtcaacagttagataagatggtgatgatccgtttggcatcacataatactcttgtataatcaccttaatagtgttttttttagaatacatgcataattggtgttttctaaataaactaaaattttgcctgtaatatctagaaaagcttcactggaatgtagcaagttggaaccccattgtagggcagccataggtctgctagttagtggaaggcaattgcatagttgtaaaggagatcagtaaactgaattagtaccaacacaaactgactaaaataaaagagatcaggccatcctttttgttttctttttctgaattgcctaattgataatttttcagtgcctgctaataataagccactgcatcttagatttctcttcagtacatattaaaccttaagagcaatcaaggagcaggtggttatatatgtaatgtttcacggctgtgttaataagccctattgcattcatgttaaacattgaatgctcaaccttatatatgtaccatccacactatatactctatctgtcccaaaatataagggattctagatggatgtgacacattctaacactacaaatctgtacagcgaacctgtccagattcatagtactaggatatgtcacatcaacccaaaatctcttatattttggagaatggagggagtatatattagttgaagaaattaactgatgttatgttaacaggaactgcggaagctcgtgaggacagtccacatggtccaagataatatagaaaatgaacatgaagaggaatctaccatgaagcttttgggagcaaagaaacaacttttgtgcttccttcgctccattgctaaggaggcatacgtcaaatcatagatttactcacttctcttctagatggttctaaaatgctttgttattcagttgtagaaatattggcccaaatggccctgcttttttttagactcatgtactttatttaaagtaagggcgcactgtgtatgtcagaggggaagttaacatgaagaattaccatattgcagaaaagcacctaagaaatgggcaaattaacct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0250700, RefSeq:Os04g0250700