Os04g0258900

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Revision as of 11:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0258900| Description = Cyclin-like F-box domain containing protein| Version = NM_001058863.1 GI:115457455 GeneID:4335323| Length = 1460 bp|...")
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Gene Name

Os04g0258900

Description

Cyclin-like F-box domain containing protein

Version

NM_001058863.1 GI:115457455 GeneID:4335323

Length

1460 bp

Definition

Oryza sativa Japonica Group Os04g0258900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:10499083..10500542

Sequence Coding Region

10499248..10500474

Expression

GEO Profiles:Os04g0258900

Genome Context

<gbrowseImage1> name=NC_008397:10499083..10500542 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:10499083..10500542 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgggctgccagctctcaccgacgacgtcctcgccgagatcctcgtccgcgtgccctcgtcgtgcgacctcgcgcgggcctccgcggcgtgcagctccttctgccgcatcgccacctccccgcggttcctccgccgcttccgctcgctccacgcgccgctgccgctcggcgtcctgtgccccgacggcgccgccgccttccaccccgccatgcccccgcacccgtcggcccccgccgcccgcgccctcgccctcgccgcggacttcgccttctccttcctccctccgcccgcccgcgcctggctcctccgcgaccaccgcgacggccggttcctcctcgaccgcgcgctcgccggcggctccaccgccttcaccgatgtcgctgtctgcgaccccctcttccggcggtacgttctgctcccgcccatacccgacgaccttgccgcctccgtccaaaatccatacctccagtgcggcggcgatggtggtctgcaatcccgcagtagcgagatcttcctggcatcttgcggcagtgacgcaggaggcgaggagccattgttcgctgtgatctggatggcgtgctgccgagggaagctggtcgcgttcttcttttcatctgaatcccaacagtggcgtgctctttcacctcccgaacactatgctttgagtacgaggagagtcatgggcgttcgactcggacagcgcaaccatgctcatgggtgcttctactggatgataaccctcacccataggtggcttgtattagacactcgccgaatggagttcttggttgtggatatctctcctgtcctttcaggccgcgcaatgatgttcagtaatcagattatcactctggaatcaatggatggatggactatcgttgttgtcgcagatgttttccggtcagataaacgatgtgtcctgtatttttataagttcatgtatttcagtgaccggtggcaactgcagagcaaaattaacttgcctgaggaatggggctatcgatttagaggcatcataggtgcatctgaatgttacttatttataaagcttgatcaccccaagcagaacttgggagatccagttcagcagaatgctatgtatttcatgtttgatatcaagaccatgcagcttgggaggttctctgagatatgttctggtactgtcagcgaagcctatctttacactggttttccaccatcacagtcgctacccagtgtttga</cdnaseq>

Protein Sequence

<aaseq>MAGLPALTDDVLAEILVRVPSSCDLARASAACSSFCRIATSPRF LRRFRSLHAPLPLGVLCPDGAAAFHPAMPPHPSAPAARALALAADFAFSFLPPPARAW LLRDHRDGRFLLDRALAGGSTAFTDVAVCDPLFRRYVLLPPIPDDLAASVQNPYLQCG GDGGLQSRSSEIFLASCGSDAGGEEPLFAVIWMACCRGKLVAFFFSSESQQWRALSPP EHYALSTRRVMGVRLGQRNHAHGCFYWMITLTHRWLVLDTRRMEFLVVDISPVLSGRA MMFSNQIITLESMDGWTIVVVADVFRSDKRCVLYFYKFMYFSDRWQLQSKINLPEEWG YRFRGIIGASECYLFIKLDHPKQNLGDPVQQNAMYFMFDIKTMQLGRFSEICSGTVSE AYLYTGFPPSQSLPSV</aaseq>

Gene Sequence

<dnaseqindica>69..1295#agcacatccctgtagccatacccacctgctgccgatccccacctgctaccgatccgccgccgccgccaatggccgggctgccagctctcaccgacgacgtcctcgccgagatcctcgtccgcgtgccctcgtcgtgcgacctcgcgcgggcctccgcggcgtgcagctccttctgccgcatcgccacctccccgcggttcctccgccgcttccgctcgctccacgcgccgctgccgctcggcgtcctgtgccccgacggcgccgccgccttccaccccgccatgcccccgcacccgtcggcccccgccgcccgcgccctcgccctcgccgcggacttcgccttctccttcctccctccgcccgcccgcgcctggctcctccgcgaccaccgcgacggccggttcctcctcgaccgcgcgctcgccggcggctccaccgccttcaccgatgtcgctgtctgcgaccccctcttccggcggtacgttctgctcccgcccatacccgacgaccttgccgcctccgtccaaaatccatacctccagtgcggcggcgatggtggtctgcaatcccgcagtagcgagatcttcctggcatcttgcggcagtgacgcaggaggcgaggagccattgttcgctgtgatctggatggcgtgctgccgagggaagctggtcgcgttcttcttttcatctgaatcccaacagtggcgtgctctttcacctcccgaacactatgctttgagtacgaggagagtcatgggcgttcgactcggacagcgcaaccatgctcatgggtgcttctactggatgataaccctcacccataggtggcttgtattagacactcgccgaatggagttcttggttgtggatatctctcctgtcctttcaggccgcgcaatgatgttcagtaatcagattatcactctggaatcaatggatggatggactatcgttgttgtcgcagatgttttccggtcagataaacgatgtgtcctgtatttttataagttcatgtatttcagtgaccggtggcaactgcagagcaaaattaacttgcctgaggaatggggctatcgatttagaggcatcataggtgcatctgaatgttacttatttataaagcttgatcaccccaagcagaacttgggagatccagttcagcagaatgctatgtatttcatgtttgatatcaagaccatgcagcttgggaggttctctgagatatgttctggtactgtcagcgaagcctatctttacactggttttccaccatcacagtcgctacccagtgtttgatgcagtaagcttgttctttttgcttgcagctatcaatttacatcgttctattatttcatgttactttttgattatcttgtttaggggaatattttattgtaatatccgctacttcttgtattttatttgaataaatatgcagataacacatgtagacggttttat</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0258900, RefSeq:Os04g0258900