Os04g0266400

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Revision as of 11:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0266400| Description = Similar to AHM2 (Fragment)| Version = NM_001058869.1 GI:115457467 GeneID:4335329| Length = 8583 bp| Definition = Or...")
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Gene Name

Os04g0266400

Description

Similar to AHM2 (Fragment)

Version

NM_001058869.1 GI:115457467 GeneID:4335329

Length

8583 bp

Definition

Oryza sativa Japonica Group Os04g0266400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:11034099..11042681

Sequence Coding Region

11037898..11037913,11038791..11038924,11039025..11039123,11039204..11039329,11040738..11040815
,11040900..11041025,11041142..11041364,11042459..11042598

Expression

GEO Profiles:Os04g0266400

Genome Context

<gbrowseImage1> name=NC_008397:11034099..11042681 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:11034099..11042681 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccaccccggccggcgtggcgccccgccgctcctccaggctcgcctccagcgctcctccgctcggagccggccagccttcctcctccccacttcctcggcgccgccgccgccgcgcttcgccgtctggctgcgccagagaggttgacaactcgcctcctccggtggtcatcttagatgacaacgaaatggagcagcatgttgaggcagaagaaatgaagaagcaaggggaagagagtgtggaggcaaatgaagcagaggagaaggacaaggatgcggaggtcttagaggaactacctgattggcttcctgatggttggatcatggaggtacgttgtggcgacaacggcaacatctaccggtattacacttccccggtgtcaggatacacattctctacaaagatggagacactacattatcttttttcggagatggatgagcgtgtgctggagtctcaggcgtgcgccgatgacaatgagcttcatagaatgcacacatggcttccagatgggtgggcaattgaagtcagagctgggggtaagaagatggaaaaaatgtacaagttctatgttcatctgcctactggaatgcggttcttgtcgaaagaaaatgtactgctctattctaatgaggggaagatttccagatgtgatgtaaagggtttgtgtgatacaagctctgaagataatattcttgcaatggtagaatttaatccagatgggcttccagaaggatgggtgaaggaaataatatttagaaagtgcaatgatggaattaggaaagacccgtattatactgatcctgttagtcgtcatgtattccgcacactcaagtctgtaatcaactaccttgaaactggacaaatcactaaacatgcctatattccgaggagaagcgttactgatatgtactcttttgacagcctcaaagtatgctga</cdnaseq>

Protein Sequence

<aaseq>MSTPAGVAPRRSSRLASSAPPLGAGQPSSSPLPRRRRRRASPSG CAREVDNSPPPVVILDDNEMEQHVEAEEMKKQGEESVEANEAEEKDKDAEVLEELPDW LPDGWIMEVRCGDNGNIYRYYTSPVSGYTFSTKMETLHYLFSEMDERVLESQACADDN ELHRMHTWLPDGWAIEVRAGGKKMEKMYKFYVHLPTGMRFLSKENVLLYSNEGKISRC DVKGLCDTSSEDNILAMVEFNPDGLPEGWVKEIIFRKCNDGIRKDPYYTDPVSRHVFR TLKSVINYLETGQITKHAYIPRRSVTDMYSFDSLKVC</aaseq>

Gene Sequence

<dnaseqindica>4769..4784#3758..3891#3559..3657#3353..3478#1867..1944#1657..1782#1318..1540#84..223#acacgctgctctcgctgccagtccgccacccaccgccgcccaccgccgagcggcctccccgcgcggcgaggccaaaccctcccatgtccaccccggccggcgtggcgccccgccgctcctccaggctcgcctccagcgctcctccgctcggagccggccagccttcctcctccccacttcctcggcgccgccgccgccgcgcttcgccgtctggctgcgccaggttcgtccctcttctctcccagagagtgatgctctctgggtgaacttgtgattctagtttgctatgcgtgagcttgactgataatcacatgagcagttgtgaaaagtggggagtcaaactagacagaccctgttcttatgtactctattgggcgattcgtgtgaaccatactcctattttggttctaggagccgatttctggcattaatattgattcttctggtgtagtgcaactagctctctgtcctgaatgaattgattgtgtattttgggatggatacacgggaacgaatcttatgcacacaagttttttcgtgtacacaccatggacaccaactaaaacatatcaccaaaaaaatctataaaaaaatatacatatacttttagtagtattacatctatatgtaaagtctcatattcaaattcattatatatagggagcaacgaaaaaaacaaatttctaacagtgtcatactcttaaaactgttagaatttttatctttttttgttacagctcaaatataatgaatttgaggttaagactttacacataagtgtaatactattgaaagtacttgtacaattctttctagattgtttggtgcaatttgttagttggtgtacacggtgtgcaaacgataatgcctgtgtgcacaggatatgttccctagatacactcatatggtgattgcaaacagttgatttatacccagtagaggtagatttttgtagctatttcgggtttttcgtatctgagcagtgtatgattagaggtaattagggtgaagccagccgaaaatattgtcagggtcagctccattgcatagcacagtaaacgatgatcgaaacaacattttactaaaggatttcgaatttcttcagggttggctaaccctcatgaacagggctagcttcgcccctgagaggtatactccctgtattcgatgcgatttctcagtttccattttcctacaactgtgtttttggtcacatttggtcagcatttctttccttactaaggatggcggttactggttagtctcaacatttcaaagaaaagtcattgcactaaggatttgcttcttctgctacagagaggttgacaactcgcctcctccggtggtcatcttagatgacaacgaaatggagcagcatgttgaggcagaagaaatgaagaagcaaggggaagagagtgtggaggcaaatgaagcagaggagaaggacaaggatgcggaggtcttagaggaactacctgattggcttcctgatggttggatcatggaggtacgttgtggcgacaacggcaacatctaccgggtattcactctaacatatgcccatacctatatatctctgtgtgatatttgatatttgtaagatcatttgggtcgagacgttacaggtttggtcgcttcctgatcatttatgtgcagtattacacttccccggtgtcaggatacacattctctacaaagatggagacactacattatcttttttcggagatggatgagcgtgtgctggagtctcaggcgtgcgccgatgacaatgagcttcatgtaagttgtactcatgatgatgtgattttttttgtactactgttgattccatttgtgttgtgctttcctgcttttcacatgcagagaatgcacacatggcttccagatgggtgggcaattgaagtcagagctgggggtaagaagatggaaaaaatgtacaaggtaattttggaccttgtccttcaattaacatcaggtgtattctgctaaaaaaatcggttgtggaagctactgcccaattatttaagagtgatggaaaatcctactccgtgttacattaagaaaaacagataacaaagttctcacaagtacaccacatgcatctttcatagagttcaaagcaaagtgctgcattcgagaaccgatctcatctggccacaaaccataagatgaagaagacatcatgcaatcaaggtcatacagacttttattacgtaaacatgatcgatacaccatgccaactttctttaacaggaggatcatccaaacaaagaacattgtccacagtcttgagtgacaacactaattcctgcagttgtgctgctccagccctcatcttctccttgcagtcatcccttcagcgaatctgtccaaaatattcaaaataattcttgagccgacagacattttcttcttaaagcagactatatccggactttcatgcagaccagcaaaaagcagctaaaccaaaagaatgtaaatgtcaagcaactggctatgccacctgaatccatttagaataccgagtcctgttcttttgtttgtctgaactatccagttttagatgagaacaaacaacttatacaaaaattgtcaaaattcgaatcaagcgttattactcataacaccgccaatgactctcacatgaaaccgaggggagacgcagaataacagttgtgaaaacaaaccgtagaaaacaccgaaaaagtttggagtgaagaacatcctgaacaacaccgttgtgttctaggatagaaaaagaatccccgagatcacaggggggttcgaacagaaccgtgatcatttcaggcacaacgattcgcgacctattttacataatgatacaatattagccagttgcactccacaattctacataggtcaggtgagagggcagccaaatagaaggtgtgttaaaaaatccatcagtttgaatagacaaggcagggtttatcatcctaccagtttatgtggcctattttgttttgcgtaagaatagaaatattgtaaagtagccacaaaaaacatttgattgtgacttgtaaggaaatccttgccttccacaatgatacaatattagccacattggagcaaaaaacaaatttcctgtaataggttttaactgtaaataagagtctttatatctccacgatacaatattagccacattggaacttttcatgatcgtttgcaccatgctttagataaaatacatgtggtgcaacataggatggaattgctggtagtgcccttcagggtggaggctgagagtttgacaaatgatttttatctgatatgattatttttcaattacatgtgactaaaaatccatggaaatatgttgttgcagttctatgttcatctgcctactggaatgcggttcttgtcgaaagaaaatgtactgctctattctaatgaggggaagatttccagatgtgatgtaaagggtttgtgtgatacaagctctgaagataatgtatggtatttgctgtaaatatttatgttattaggcaagtaatgcttttttttagagctaattgttacacttatttacagattcttgcaatggtagaatttaatccagatgggcttccagaaggatgggtgaaggaaataatatttagaaagtgcaatgatggaattaggaaagacccggtacattacaatatagcatgcgattcttttgatataatatgctggcatatgggaacacattgattaatgttttctgaagaaacattatcttcttgtgcagtattatactgatcctgttagtcgtcatgtattccgcacactcaagtctgtaatcaactaccttgaaactggacaaatcactaaacatgcctatattccgaggagaagcgttactgatatgtactcttttgacaggtgcacagatctggtaattacttttttgtattgttttttccttatcaaaattatgttattatccttcaaaacctctaactctcaaagaaaaatctgcattacttgctttttaatgttcttagttcttacacagttgagcatgcaattttgataaatatacgcagtttactatctggtccagttatttctcatttaattcaagagaccatagaagcttttgaaatgagcaatacagtgctcttcatgatactgaaaattgtttttttgagggaagatgctggaaattcttgtcagctttcccaaagagtccacaataaatcaagttaatattgagaattgcttgtgtcttagagcctttggccatgcataaccaatgttttgacagtttctctttcactgcccttgtacgactctttgttttatcctatgccattcttttggattgtccatgtatcagctattccgcttcagccttcgagcataaaaaagggtaaagttgggtctataagttttgttgaccttatcggctcattgtccatcgagttgtaactcgattctacttcctattttcatgctttctggcacaaaccaaatggttttctttgagcctaagttttagaactgaaatgtcaattgatttctcatgacattcctgcaaatttacatacatggaatttactacagaattggttgaaaatattattttaatactttacatgccatttccaatctaacagtagttatcaataacattgactgtagtgtgagttgctcttaaatgtttttctttcatggctatttgtgctacctttatggccatttctgagaagtgtcagggcttctttgaatagaatttggtaattgttttcaattgcagcctcaaagtatgctgaaaagactgaaaatacaaggaaaagcaaagaaaaagtctgtaggagcatcggtcaaaggcaagaaactatctaatggcctggcatcaaataactgtaagttcatgtagctgttagttatgtgtggtaatcacattagtacatttcctacagttattgactttgcctttggcagttatgttactttctgttgaacactaatttgtaatacaacctatttcatagaatctgtactctgtcagcgtcaagttacacatgcgacaaatgaaatacttggtattagtaaaagggtattttaggttataggtattaagtttttgtagatgtggataattataactaccacagaaattggcacaagatcatggacaagggagcatcatctatgacaaataagttgtctagagataatcataagcagaaataataaaaaaaaacaacaaacaagcaaacaataaaacaggggaaatttgcagtgtcgagatcgaaggtgctgctgtgctggacatggccgcagatgtggagtcctaaacttttgtttcagtcatatgtcgaatcaggtgacatgagtccttgggtttggttttaaactaataaggaattcaaataatatgcgagctgcttgatgtgcttatcacaagtaacatatcctatatatttatatagttcattcccactaagtgtagttaatgctatttctctcttctctcatgaagccacatcatcccaattatttttagcctttggatgatagatctatggtacaaatagtttcttctttcttctctcttaaaaccatacaatctcaattgttttttagttcaaaattcataagtatcaattacataaaatatgttcaccttgcattatatttgcaatcatgtgttaattatataaaacataggaagccattttattttggtttacaaaatataatatagcttatttttacatactatacaacttaatttaccgcagcaacggggcggagtattcatctagtatataatgttgtcacggaaaccatccacaattgtcatggcttcacaaatagcactgcccgtcatccaatgtttctgtattcgaatgagattacaatttcctgcagttgtttttgtgtgtagcttttctctatattttcaaaattgatatctgaattatctttagtttccgaatgtcagattatcaccagtaaacagttcacataacctggaaatgtaggcgaaaaatctaggctgtaatatgcacaccacattttggttatgcctataccactaaacattctttaggcttattttatttctaatggccaaggcattgctcctgccagctgatttataaatatatacatatattgtttttatttcccttggaaactgatataatgacactcaacacttgatgctgtagttattgtttttttctgttctcagtgaactggctactatactaatcgatatgttctgggcaaaattcctggttgtaaatgtttaataatttgggtgaaagtttgactgcgatagttccatacttctagagcactttacaaccattaaatgaaggaaatatttgcttttgtaccaataaaattcacctcgttttgttttataccaccaaagtcttgctgttaaatgtatacctccaaatttttattctgtttagttctatacgacttcagccagtatgggcctttatatttttgaatttttatatctttttggcaagaaaaacatgtggaataccagatctagcctgtcgtggctctgtctggatcaacgtgatgcgtgcagaatacaccattgtggacaactcgactccctggcacatcaccctatgtgtgctcagcaaactatgttgcgtcctctgcctcgttacgcttcaccacctttcctgctagtcggttaaggcatatgaacaccgttcatccacaagatctaaagctctgcctggttcatgctgtgctcaattcattcattagagatgggaggaaaaggagagatcctggacgagctcactgtagaagtgctgactggaccgtttcgtgatgcggtgctgcttggctgcctgagtcagatagcaatgacacacaggttctgttatgaaaatagatgcacaacggagacacgaattttacgtggaaaactcttgcgggaaaaaaccacaggcaccgaccggcaatgatcactattgagaagttgattacaaacgtaggggaataacaatgggaacgtcaccaccccttccagtacggcttagaagagtatatataggagataaaagaaagacacctaataggaaaatacatggagtcctactaggaaactaatccgaatatattgtaggtctaaaattcggatcacatatttaacaggttctgagtggcatcacttgtagcaatgggccaatggctgaggtatggccatacgggggagtgtagagaagaggagaagagggtgggggtggacagcaccggtggtgggcttgccaatggttcaccggcgagaggtaggcgtgatggcataccacaactcagcataaggacaaggatgaatgagtaggatgaggaaggtaaaggtgtcagggctatctgtagaatacacaatgtggatggcagtggtataaaaattaatggagaacaattttgatggtataaaaagtaaaagagatattttggtggtataaaattaaacctcccaaattttggtgttctaaaaccaacatttccttaaataaaacacaagtcgttttcacaatttagattgctttatataatttgtattgttttgtcctccatctacctgatttctaattgccacatcatatctgaaggtatgtcttctgggttggatcctgaaatcgggccagaagaaaggaaacttggaactgttaaatccataaccaaagaagcagttaactcagatactatcaagcgatcaagaggaaggccaccgaaaatcttgatgccaactattgaaagcaccaaacctgagattgcattagtcacgtcagaggctatcaagagatcaagaggtaggccatgggaaaccatgatacaacttatgaaagcattaaaagtatgaaggttattggtaaaacaacaatgaactcaggtcatagcatggctaaacagggctgtaaaatttgtatagcaaagataaggactaaaagcagtgaacagcgaagtcaagcaaagaaatgccctatactagaggtagttaacaggaaaaaagtggagcgaattaaattaagaaatattagatgcaaataataaaatgtcacttggtgcctgtcccaatgcactttttatgaccaatagaaagtttaaaagcactaagaaaatcagaaatgttgtggttttgaagcacatgtacatcgaggatgctttattacaacaactattctgtttgaaagctgacaagtgaaatgaacatctctaaccaatccctcattaactagttattttttgtcatgctagtgtttctctgttgttataatcgccataacatctttgtcttgtgctattaaatataagctgattgctgctctggtcaccatgtgtgctgcatgtgacttggagattcatatgtagtcctgattattccatcatacattcctgaactttagttagtttcttgcagtacgtatcatgttgttgtggagatcacacagaatggtgggatgtcgccatttgttgtgtgatctgccaatgaatgttttcctgcttttctggttttatttccctgtagctgaactgaaatgtttctagtaatggataggggatgagctttgctcttctgtttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0266400, RefSeq:Os04g0266400