Os04g0268300

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Revision as of 11:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0268300| Description = Conserved hypothetical protein| Version = NM_001186890.1 GI:297722910 GeneID:9268768| Length = 3495 bp| Definition ...")
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Gene Name

Os04g0268300

Description

Conserved hypothetical protein

Version

NM_001186890.1 GI:297722910 GeneID:9268768

Length

3495 bp

Definition

Oryza sativa Japonica Group Os04g0268300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:11128488..11131982

Sequence Coding Region

11129027..11129356,11129598..11129765,11130729..11131332,11131675..11131934

Expression

GEO Profiles:Os04g0268300

Genome Context

<gbrowseImage1> name=NC_008397:11128488..11131982 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:11128488..11131982 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcggtaggcgtgaagcgcaaactcatcgtcgacaaatcccctacccatcacctcctccatttgcctccgtcgcccatcgctttgcttagaaggagggggctaccttcagatctggaatcctctgagggtttcttcacatctctccgttcggacgctgcttacaccgccaccaccgaagaagatgtgcaagctgtagctcgcgccgtcatctgcatcgccttgaacttccctgaagccatctgccagttggtgcgccagctcaccccggggaacgttgctgtggcgctcgattgggacctcctcgactccgatcaccttcggaagaaggcccagaaggttgtgaaccgcactcagttgaagaactttggggacacttatcgccgacgcttccaaacatggtgctggctggagtcgatggcaactggccttgggcgctgcccattcacgggaaacatccttgcaagccctgagtggtggacaaggatggaccagatgaggagaggtgcccgtgccttccgcaacggtccccttctcttcactccagagaaccacacggtgtttaggggtagggtatgtaccctaaaccgctctggggtccctgtgagcccatgcgccatctctgcagctcctcaacaggctgaaatcctcgacattgaggatttgactgagcaagcgcagcaagaacccgaggatcaaactccacggcgtggcaagagaacactcactggtggaacatcctctggcagcagctcgaagtggtcaaggggatcttatgccagtggcgcactgaaccgtttggcgaacctccgcattcagtcaaacgagagcagggccaggcgcgaagagctcaagcaagcaaagagtgctagggcctgcatggagctgttgaaggcagacggagtcagctccagggacccaatataccacatggccctccgggtatttcgtgatggcttcttgcgcgagtttttccttgatgactgccccacaccggaggggaggctctacttcatccagtcccagtatcaggacatggcccagtaccagccactacccccgcctggttttggaggatacctccagtcagctcctcccggtattgtggttggagagggttctggttatgctgccgaagctgaaagagttggagctggagatgatgaggacggtgctgatgatgacggcgagagagttggggacaacaagggaggacaaggtggtcatggtaaaggtggtgatgacgacggcgatgatggaaatggtggtgctgccggctatgggggatctggttatgggggtgctctctacgggggcgtccctggaagctatgatctttccggatatgcaatgttttaa</cdnaseq>

Protein Sequence

<aaseq>MAAVGVKRKLIVDKSPTHHLLHLPPSPIALLRRRGLPSDLESSE GFFTSLRSDAAYTATTEEDVQAVARAVICIALNFPEAICQLVRQLTPGNVAVALDWDL LDSDHLRKKAQKVVNRTQLKNFGDTYRRRFQTWCWLESMATGLGRCPFTGNILASPEW WTRMDQMRRGARAFRNGPLLFTPENHTVFRGRVCTLNRSGVPVSPCAISAAPQQAEIL DIEDLTEQAQQEPEDQTPRRGKRTLTGGTSSGSSSKWSRGSYASGALNRLANLRIQSN ESRARREELKQAKSARACMELLKADGVSSRDPIYHMALRVFRDGFLREFFLDDCPTPE GRLYFIQSQYQDMAQYQPLPPPGFGGYLQSAPPGIVVGEGSGYAAEAERVGAGDDEDG ADDDGERVGDNKGGQGGHGKGGDDDGDDGNGGAAGYGGSGYGGALYGGVPGSYDLSGY AMF</aaseq>

Gene Sequence

<dnaseqindica>540..869#1111..1278#2242..2845#3188..3447#aaactttccccaaaagcttgcgtgttgtgttttgccattcatcgttccttccagagcaccgcaccaccattgttgcatgtccaagctcaagctcacctattgcccaaaatatactgctgtgccctccccattgttcttcgcacagaggacatctcgaggtcgcctgcaggagtatgaagaccggcggtcgtcgaatctcgaatcgtggcagcaagcatagagggcagtcgtcgtctgcatcatcttcatcgtcgccagtccgggcaagcctggcagaccacgcgcatggcataggctgcttggcctaaaaaggaagcatccacaagcccactttggtgtggtgcatcggaggaggagaaaggtgccgttcgcaggggcatcggcgcttcgtgcagagggaaggcatcagctgcccgattccggaatcgctgtggccattgcagagaccggtcatctccgatctcgtgctgcacagttgaaggggatttggcgcccttgcatcgccattgcggaaaggggatccagctctatataagggcatggctgcggtaggcgtgaagcgcaaactcatcgtcgacaaatcccctacccatcacctcctccatttgcctccgtcgcccatcgctttgcttagaaggagggggctaccttcagatctggaatcctctgagggtttcttcacatctctccgttcggacgctgcttacaccgccaccaccgaagaagatgtgcaagctgtagctcgcgccgtcatctgcatcgccttgaacttccctgaagccatctgccagttggtgcgccagctcaccccggggaacgttgctgtggcgctcgattgggacctcctcgactccgatcaccttcggaaggtacagcccaacattttgtgatttattccccatttttttgcttgcatgactttggttcatagatggctgctgggcacaccacttggaacgaggcggagctgcaagctttcctcgaggcttacatggaagagatcgaggcacgaaccatcacgagcacctgcccaaaccgccaaggctacgccaaccttgaggtcaagatgtaccagaaggcccagaaggttgtgaaccacactcagttcagaaggcccagaaggttgtgaaccgcactcagttgaagaactttggggacacttatcgccgacgcttccaaacatggtgctggctggagtcgatggcaactggccttgggcgctgcccattcacgggaaacatccttgcaagccctgagtggtggacaaggatggaccaggtatgtgttcatttcattcctgttcttgtcatcaatataggttcatatacattttagtaattagcaaatcaaaatgtatgctgaacaggtgtagcattagagactactgttaatgtaagtactgcacaccgtttgattacatgtaatactagtatgctgagtttaacgaagctatttaattagttggaagtaattagatagaaatactttttgctctagtacttatctctgttgtcatgttcatgtaggctcatactcttcagttagtgttgtacagaggtagcgctattgttttatgactgagcatgcttctgtttaggagtactttcagaatcactattactagctttatgtgactttaaccaaggtatttaattagttaggactattggtagttatggttgtagctgtagtagtttactgtaatgtaaaggccatttactgtacaatgaatgagtagtaatggtagtattacaaattatttgtttgcaagtacataaggtagcattttcgaatttagttggaaccaaccatgcgatcggctaattagctatttaagtagttctagctgtagaagtgaactgaaatgtagagttcatttaggctgcatttatgtgtactaaaggtacatttatgaataatatgtttagaattacataacgtcgtttcctcttattatgttctaaccaaccatggcatcagtcagtaaggactgatcttataaaaacttgcaccactattatttgacataaaccaacctacttaattagttacgactaaattaagataaggttgtagctgtactagtttattgtaatgtatagctcatttagtctacttttaagagtactaaaggtagtattacatatcatttgattacaagtacatatgccttgcatactgtttagtatgatttttatgaataccgtactcattaatccttttgtgcttattcctgtgcagatgaggagaggtgcccgtgccttccgcaacggtccccttctcttcactccagagaaccacacggtgtttaggggtagggtatgtaccctaaaccgctctggggtccctgtgagcccatgcgccatctctgcagctcctcaacaggctgaaatcctcgacattgaggatttgactgagcaagcgcagcaagaacccgaggatcaaactccacggcgtggcaagagaacactcactggtggaacatcctctggcagcagctcgaagtggtcaaggggatcttatgccagtggcgcactgaaccgtttggcgaacctccgcattcagtcaaacgagagcagggccaggcgcgaagagctcaagcaagcaaagagtgctagggcctgcatggagctgttgaaggcagacggagtcagctccagggacccaatataccacatggccctccgggtatttcgtgatggcttcttgcgcgagtttttccttgatgactgccccacaccggaggggaggctctacttcatccagtcccagtatcaggacatggcccagtaccagccactacccccgcctggttttggaggatacctccagtcagctcctcccggtatgtatgttgcatgcagcttgtttaggttcatcatacaatttattttcattcatacttgctcttgttcatacctagactgttggtaccaaagtcattcctgctgttgttaagcattatgcaaagacataatttgcaatgatggcaacctactatttaaggtttattaccattactggaagtcacctctaggttctagttacataaagtgctacacaataacaaaacccctagttacataaagtgttgatcaatattgcgcaagttgttgtcacataaagttgttgttacatttacaatacataaccagttgttattacagttattgattgtcacctctaggtattgtggttggagagggttctggttatgctgccgaagctgaaagagttggagctggagatgatgaggacggtgctgatgatgacggcgagagagttggggacaacaagggaggacaaggtggtcatggtaaaggtggtgatgacgacggcgatgatggaaatggtggtgctgccggctatgggggatctggttatgggggtgctctctacgggggcgtccctggaagctatgatctttccggatatgcaatgttttaacattgcatgacactatctgataatcgatccgtctgggagttcctgtcg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0268300, RefSeq:Os04g0268300