Os04g0269600

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Revision as of 11:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0269600| Description = Copper amine oxidase family protein| Version = NM_001058873.2 GI:297602330 GeneID:4335335| Length = 7519 bp| Defini...")
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Gene Name

Os04g0269600

Description

Copper amine oxidase family protein

Version

NM_001058873.2 GI:297602330 GeneID:4335335

Length

7519 bp

Definition

Oryza sativa Japonica Group Os04g0269600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:11283290..11290808

Sequence Coding Region

11283324..11284244,11284388..11284699,11286308..11286421,11289333..11289782,11290159..11290256
,11290369..11290582

Expression

GEO Profiles:Os04g0269600

Genome Context

<gbrowseImage1> name=NC_008397:11283290..11290808 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:11283290..11290808 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcactccacctccctgctccggctcatcttcctcgccctcggcgcagccctcgtcgtccttgtcgttcgctccgcgttccgccttcccggcgacatcgacacgactacgacctctctgttcgatgatggcaacggcggcagctgcaccaggttctcgccgtgggcgtgccggcaagggcggggcgacccgaggtcgaacccgtccaacccgcggcgaccgtcgcacgagtccgacgtgccgcggcacccgctcgacccactcacggtgagggaggtgaaccgcgtccgcgagctcctccgcgcgcacccgctgtttgcgtcggcgccgtcgtccctgttcgtgcactcgctggagctcgacgagccggaaaagtccgtcgtcaagagctggcggaagggcgccgacccgctcccgcctcgccgcgccgtggccgtcgtccggttccgcggcgagtcccacgtcctcggcgtcgacctcagcgagggcgacggcgcggtgactcctctgcctgtccctgcctccggttacccgatgatgaacatggacgagcagaccagcctctgcttcgcgccgttcaaggacgaggcgttcaacgccagcctcctccgccgtggcgtcagggcctccgacgtcgcctgcctgcccatctccctcggctggtacggcccagcggaggagaaccggcgactcatcaagagccagtgcttctccaccgagggcacggccaacttctacatgcgccccatcgagggcctcaccgtgctggtcgacatggacacggcggaggtcctccacgtctccgaccgcggcgccggcatccccatccccgccgccgcgaacaccgactaccggcacggacactcggcgccgactccggcggaggcgcaagcgcaggggcggcacgggtaccagaccgacccggcgaccggcgagcaccgcgacgtgatgtacaagggcatggcgtcggagctgttcgtgccgtacatggacccgacggaggcgtggtacttcaagacgtacatggacgccggcgagtacggcttcgggctgcaggccatgccgctcgtcccgctcaacgactgcccgcgccacgcccgctacctcgacgccgtcttcgtcgccgccgacggccgcccctacgtgcgcgagaacatgatctgcgtcttcgagcgctacgccggcgacatcgcgtggcgacactccgagagccccatcaccggcatggacataagggagtcgcggccgaaggtgacgctggtggcgcgcatggcggcgtcggtggccaactacgactatatcgtcgactgggagttccagatggacggcctcgttcgcatcaaggttgggctaagtgggatcctcatggtgaagggcacccagtactcccacatgaaccaggtccatcaaaatgacaatatgtacggcacccttctgtctgagaacgttattggcgtcatccatgaccactttgtcactttccggctcgacatggacattgacggcgccgacaactccttcgtcaaggtggcgatggcacgacagaacaccggcgccggcgaatcccctcgtaagagctacctgaaggctacccgacatgtcgcaaggacggagaaagatgcccaggtccgcctgaagctatatgagccatccgagttccacattgtcaaccccatgaagaagacacgagttgggaaccctgttggttataaggttgtcccagccggtactgcagctagcctgttggatccagaggacccacctcagaagaggggtgcattcacaaataatcagatttgggtgacaccctacaacaaaacagaggaatgggctggtggtctatttgtctaccagagcaaaggggaggacacacttgcaacttggtccgaaagggaccgtccgatcgagaacaaggacctggtgctgtggtacacgctggggtttcaccatgtcccgtgccaggaggacttccccatcatgcccacggtgtcgtccagcttcgaccttaagccagtgaacttctttgagagcaaccccatcctagggcagcgtccgacccaggagaacgacctgccggtgtgtgccgccgctgccacgacctcttga</cdnaseq>

Protein Sequence

<aaseq>MDHSTSLLRLIFLALGAALVVLVVRSAFRLPGDIDTTTTSLFDD GNGGSCTRFSPWACRQGRGDPRSNPSNPRRPSHESDVPRHPLDPLTVREVNRVRELLR AHPLFASAPSSLFVHSLELDEPEKSVVKSWRKGADPLPPRRAVAVVRFRGESHVLGVD LSEGDGAVTPLPVPASGYPMMNMDEQTSLCFAPFKDEAFNASLLRRGVRASDVACLPI SLGWYGPAEENRRLIKSQCFSTEGTANFYMRPIEGLTVLVDMDTAEVLHVSDRGAGIP IPAAANTDYRHGHSAPTPAEAQAQGRHGYQTDPATGEHRDVMYKGMASELFVPYMDPT EAWYFKTYMDAGEYGFGLQAMPLVPLNDCPRHARYLDAVFVAADGRPYVRENMICVFE RYAGDIAWRHSESPITGMDIRESRPKVTLVARMAASVANYDYIVDWEFQMDGLVRIKV GLSGILMVKGTQYSHMNQVHQNDNMYGTLLSENVIGVIHDHFVTFRLDMDIDGADNSF VKVAMARQNTGAGESPRKSYLKATRHVARTEKDAQVRLKLYEPSEFHIVNPMKKTRVG NPVGYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKTEEWAGGLFVYQSKGED TLATWSERDRPIENKDLVLWYTLGFHHVPCQEDFPIMPTVSSSFDLKPVNFFESNPIL GQRPTQENDLPVCAAAATTS</aaseq>

Gene Sequence

<dnaseqindica>35..955#1099..1410#3019..3132#6044..6493#6870..6967#7080..7293#acaaagcacaaaggccagagcgaaggccactccaatggatcactccacctccctgctccggctcatcttcctcgccctcggcgcagccctcgtcgtccttgtcgttcgctccgcgttccgccttcccggcgacatcgacacgactacgacctctctgttcgatgatggcaacggcggcagctgcaccaggttctcgccgtgggcgtgccggcaagggcggggcgacccgaggtcgaacccgtccaacccgcggcgaccgtcgcacgagtccgacgtgccgcggcacccgctcgacccactcacggtgagggaggtgaaccgcgtccgcgagctcctccgcgcgcacccgctgtttgcgtcggcgccgtcgtccctgttcgtgcactcgctggagctcgacgagccggaaaagtccgtcgtcaagagctggcggaagggcgccgacccgctcccgcctcgccgcgccgtggccgtcgtccggttccgcggcgagtcccacgtcctcggcgtcgacctcagcgagggcgacggcgcggtgactcctctgcctgtccctgcctccggttacccgatgatgaacatggacgagcagaccagcctctgcttcgcgccgttcaaggacgaggcgttcaacgccagcctcctccgccgtggcgtcagggcctccgacgtcgcctgcctgcccatctccctcggctggtacggcccagcggaggagaaccggcgactcatcaagagccagtgcttctccaccgagggcacggccaacttctacatgcgccccatcgagggcctcaccgtgctggtcgacatggacacggcggaggtcctccacgtctccgaccgcggcgccggcatccccatccccgccgccgcgaacaccgactaccggcacggacactcggcgccgactccggcggaggcgcaagcgcaggggcggcacgggtaccagaccgtccgcgtgccgtcgatggagccgccggcgggcgggccgggttcgagctggtcgacgggcacacggtgcggtggggcgggtgggagttccacctgaagcccgacgcgcgcgccggcatggtggtgtcgcgggcgcgggtgcaggacccggcgaccggcgagcaccgcgacgtgatgtacaagggcatggcgtcggagctgttcgtgccgtacatggacccgacggaggcgtggtacttcaagacgtacatggacgccggcgagtacggcttcgggctgcaggccatgccgctcgtcccgctcaacgactgcccgcgccacgcccgctacctcgacgccgtcttcgtcgccgccgacggccgcccctacgtgcgcgagaacatgatctgcgtcttcgagcgctacgccggcgacatcgcgtggcgacactccgagagccccatcaccggcatggacgtaagtgcaaacccatacgactcctctgcttctcgctttcttgatttctttccttgctgcttggcgccaacgatgcgagtcatgctactccatttccctgtacttgtcaccgatgagtaatttttaattttaaccataagtagttttaaaattatcatattattaagcgtacaacatactttcacaatataagtatttttaaaaaaatttatagacttgtagcttaaatatgagtggttaaatttaaatatgaaacaatatcctgtggtcattagtcatcacctacgtaagcggaactgtaaatgttgctcatatgatttggctacttgcagaagttgacggttttgacagagattggtgatggatattttcaactttaggacactaaagaatatcgttcgcatataccgtcaacaaggagtcgacaagattccaatcaattccgatgcaagctttatatatatttcaaactagaaaagacatatcaccatcgttccatcaatgtgggatatgtttatgtataggcctaggaatacctcatattaggaatttacctatgtgacctatattttttataagttgctggtttttttcttattggtttttcaatgaaatacatataaagcataacaacctcacaacataaaaaggaaagtggattctaatccctcgagatgacgtcccctcatgtatctttgttttcttcaaattcaataaaaatagttatgaaaaattatttagagtatagtgatatttattggtccacaaaaatcaaagaaaaagtggcctacacgttaagtaaaaaaagataaatctgggtatgaataattcgttactattaatttatctttttttatctcggtgtgtgagttgaattcggacctaagattttgtggagtgatatatatacattgtatgagtgttgtcaaattctttgataatttttcgtaactgtttggatgctttttagacaaacaagggaacatcacctttagggatcaaaatagtttatccatagaaatctgtaaatttattgtaaactcactctaacttaaagtttgctgtatttattttttgaaattgatttctcaaatatgcctttttacccttagctcctacgcagttttattttgttatattgtcaagtatgcacatcaaagtataggtgttaagtttaagttgtttaaactctttgagcgaaaaaaaattggcatgttagttgttgatgttgatctaataatttataattagaaagaaaactcgatcacttgagaaatagataatcccaaaatacaatgtatctaccgttcctgtggaaactgaaccatttcccacacaaagttcgtgcaccacaaataatgatacaaaagcggtaggtgtgagagaacacctcacatataaacgagaagtggacgtagctatcgatcgatcagtccaaccatggcacaatctgctctgctctgctctgtttgtttggatatgcagctagctactaaccagctagacactggtacgtataacactttgcctttgtgtctgtatgtctgatacgaatggatgattgattttgtgtcgctgcggtgcggtgcataactttgcaaaatgcagataagggagtcgcggccgaaggtgacgctggtggcgcgcatggcggcgtcggtggccaactacgactatatcgtcgactgggagttccagatggacggcctcgttcgcatcaaggtaagctagccaccgcgcgctgctctctgctctgtctacatcctcttcctcaccacgcatccatgcatccaccaccacactcgtacacacccgtgtaggtgccacataagtcgccagcacaacatataggaaaaatgaacaaaacgactaaaacaatatataggaaaaaagttgtatatgtattgtgcatggtctaaaagccaatgatagaaactaaacacggatgaaaaaaaatacttaaaatcaactttataattagttaattaacccagatgttctcattggttacttgctcgagggctaagggcgttttgaaattcaattttgcctgaggctgataaaccaacaagcactcgaagtatcttctcctaggctcatatcaatcaatgtactgggaacagttttaaatactccctccattctatgataattaacactaggacaattcaagtttaaactttagccacttatcttttttaaaaaaaaactttgtaaatggttaaaagctgataggttatataatcgaagtatgtagtgctataaatataaccatataattttttcatcatagtacaattatttcaaaataatctgtggttaaagtatgatagttgtagtcaaccatgttagttactccctctgggttgatgatacttgttgttttggacaagcttaatgtcaaatttttaaatctttgactataaatattttttaaatatttattttacaaatatattgtccagacatatagattatgttaaaaaaatacttcaataaaaatcatatatttattgatatttatatatatatatatatattataaagaaaatagtgcccaaagttgtttcctagagaccatgttgttgtcattttgacaagtattattaatctggaagaattatcggagaaagaagagagtataaaagaagtgttaagcataggtccttcatcgatcattgttgttttgagactagcatccttcttatctatcctacatgctacatcacgagataaaaaggttagtttgcagaagcatccctctaactggctgtattggagattgttaagctacttgtagaggtggtgatgacaaggacagtgaaaatacttcaggatttgcttttttaacacgtcattcaaatagttaaaaaaaatatttttttccacaccagaaattatggtgtcaaaaatcactcgacaaactgggaaaaaatatttaatacatatgatgaaaatcagctgagaaaaatagtgtacacgtcagatctttttcacgtgtgcatttaatttgatcttacgccaactaattgaatagcacttgctccatgttatcagacttctctaatacggagtatattttatgattatttgacataaagaaacaaggcacgtgtcctcgtgttcttatttctaaaacccatatctccaaaaggacagcatcggataaaggcagggagagatcaccgtgtcaaaacaatctgaacaataatcagccagctaaaatctgatgaacaataatcaccaaacaccagcattactgttaattattcaaagaaagtacagcgatggagcatcgtcgtctatccaccccatgtccccgtatccacttgttgatgtccgtttgctagtgtttatatagtagctagatgcaagcagattctccgtaggagccaaaagagattctctcggtggatcggattaaaacttttcagtccctatcacattggatgtttggacactaattaaaagtattaaacatagactactgacaaaactcattccataactctggactaattcgcgagacgaatctattgagcctaattaatccataattagcatgtatgatgctacagtaaacatgtgctaattatagattaattaggcttaaaaaatttgtaacgcgaattagctcttatttatgtaattagttttgtaagtagtctatgtttaatactctaaattaatacccaaacatccgatgtgacatagtgtaaagtttaatccctcgatccaaacaccccccgagatttgtgctagttggatctttcacatcgtacgatgcacacgtcagtttgatatctcagtcttataagtttttgataagccaacagctcgagtgaacaatttgtctagaaaatgggtgtcgttttcatcgctttgatcggcagaagaagtcatccaattggtgcatgttgcatcagtccacatcttttaggacagtatggtagcacgaatctttaatatatatatccctcttccctgcatgattgcacatcactgttcttctttttgttgcgaatgacaaacaattttatatacgacaattttggaatattcatactctttttcttttgttggacctagttgtgttcttatttgtgggatagttgataggagtatttattaacactcctcctgggacggtgatgagatggactatggaaatcttgtttgatctaaagaattttttatgatatttcagtgtttggcaaactgatttcgttttgagaaagcctgacagttaaataacatattttttctaaccttgatataatctataaaacaagcaataatggatataaattttcattttgacaacttcttaaaaataagcataacacagtaaatcaagtacagcacattaacaacaatccaaacctaattctgagtgagtaaattttggcttatgtactaaactagctgtgtttttaataatactactaaactactcccttgatctcaaaataaacaaatgtaatacgggatgtgacacatcatagtaccatagattcatagcatattcctattcatagtactagaatgtgtcacatcataaacgtagtttgtttattttaagatagaagagtagcatcatagctaactccgggtgcaatgactgtgactgcaggttgggctaagtgggatcctcatggtgaagggcacccagtactcccacatgaaccaggtccatcaaaatgacaatatgtacggcacccttctgtctgagaacgttattggcgtcatccatgaccactttgtcactttccggctcgacatggacattgacggcgccgacaactccttcgtcaaggtggcgatggcacgacagaacaccggcgccggcgaatcccctcgtaagagctacctgaaggctacccgacatgtcgcaaggacggagaaagatgcccaggtccgcctgaagctatatgagccatccgagttccacattgtcaaccccatgaagaagacacgagttgggaaccctgttggttataaggttgtcccagccggtactgcagctagcctgttggatccagaggacccacctcagaagaggggtgcattcacaaataatcaggtgagatacaacttttcaatagtatcgaattcgggtggtatagtgtattaataccaaggtagaaattaaaccaactaattattgcaaattaccatacacacataaatgtttttagatagacatagggtatggatcatttgggacctcgatttgaaaggaagatataatacatgaagaaatttcatagaattttggtaatatggtgtaaaagttatgagagaattatgtgaactctatacattccaaacaaaaagcaccatatacataataaaattagaactattagagggctaataagggaaaagtgcacagtctgtcaatcatacataaaagaagatatatttggctataaatctggttcacttttgtactacagatttgggtgacaccctacaacaaaacagaggaatgggctggtggtctatttgtctaccagagcaaaggggaggacacacttgcaacttggtccgaaaggtaacaacatactaacaatcacttacacttttgtcaaccaattcaacaggagttgtaactaatcgagtggtcatcgttgacctgtcacgcaattacgtacgtgacctaacagggaccgtccgatcgagaacaaggacctggtgctgtggtacacgctggggtttcaccatgtcccgtgccaggaggacttccccatcatgcccacggtgtcgtccagcttcgaccttaagccagtgaacttctttgagagcaaccccatcctagggcagcgtccgacccaggagaacgacctgccggtgtgtgccgccgctgccacgacctcttgagacgacagcggatcaccgacatgtgtgcgtgcatggtcgatgcttcggtgtatcgatctactgatatggattgttcatagtgaaagaatgtatcggtacatctacggatttggagctagccatggctggctatctatgttgctctatatatgtatgagcggatgtatgtgcactgcagtggtatgaacataattgagaacctgaaaggagcaggcttcaaggctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0269600, RefSeq:Os04g0269600