Os04g0274400

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Revision as of 11:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0274400| Description = YL1 nuclear, C-terminal domain containing protein| Version = NM_001058886.1 GI:115457501 GeneID:4335351| Length = 51...")
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Gene Name

Os04g0274400

Description

YL1 nuclear, C-terminal domain containing protein

Version

NM_001058886.1 GI:115457501 GeneID:4335351

Length

5105 bp

Definition

Oryza sativa Japonica Group Os04g0274400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:11557553..11562657

Sequence Coding Region

11557838..11557969,11559967..11560034,11562241..11562415

Expression

GEO Profiles:Os04g0274400

Genome Context

<gbrowseImage1> name=NC_008397:11557553..11562657 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:11557553..11562657 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcggaggtggtgaagacggagattgtgctcgcggcgacgtttcccttcaagaaggttcagatcgccgacaagtaccccaagggccagtcccgcggccgccagtggaagcacctccgcctcctcctccagtcctccgacgccacctcccttccccccgaccgccccaactatttgaatatccagtcgcccccatcaatttatccacccaagagatattgtgacataactggttttgaggcaccatatgtggatccaaggacaaagctgcgctatgctgatccagaagtgttcaagcaaatccgaatgcttcctgatgaatatgtccaaaggtatctggcactgagaaatgctgccgttgtactgagataa</cdnaseq>

Protein Sequence

<aaseq>MESEVVKTEIVLAATFPFKKVQIADKYPKGQSRGRQWKHLRLLL QSSDATSLPPDRPNYLNIQSPPSIYPPKRYCDITGFEAPYVDPRTKLRYADPEVFKQI RMLPDEYVQRYLALRNAAVVLR</aaseq>

Gene Sequence

<dnaseqindica>4689..4820#2624..2691#243..417#ctgagactgataggtggggcccacatctgtcctctaattctctccacccttctcgtttcggaacgccgccgccgccgccgtccaccgccgcaaccagcccccaccaactccggccgttcccggcgcgtcctcccgaacgcctcagcccccacccgccagcaggtggaggcctgcgccggcagcgtcgaccccggctctctctctatctctgtctcacctagtcgaggcgtggagatcggagcatggagtcggaggtggtgaagacggagattgtgctcgcggcgacgtttcccttcaagaaggttcagatcgccgacaagtaccccaagggccagtcccgcggccgccagtggaagcacctccgcctcctcctccagtcctccgacgccacctcccttccccccgaccgccccaactgtaagcgcctccgatccaaaccaatcttccccccctcccccctccccgctcaattaatctgccgatttcttcattgggatcagtttaatggtgtggatttatctaccttgttggttgttgggcgcttgtgattgtactactcatcgaggatttgtgtggattcacttctataggtcaacgagcccttgttggcattgggagatttatctggttagggattgagaattcgatgctatgcattattcatgttaggcccttgtccagccaacggttgctattgtgattgcgcattagattgttcttatgttctgttgcaattttacaatgttactatgtgaataacttaatatggtttagatttggtggtaatctaatagatttttgaggctacggaagctacatgttcatatgccttgtcttgttgcgaaccgtccatctaccgtgaaaacgcaaaccaattggatagggttatcatcatttgtttactctcccaaataatctggataagcaatctgagtccgtgcaaacaacttggttctggaagcggattcttaataatcaaacgatgtttttctactgaagtccaaaagcaggtacggagctgcttttgtggattttaagcggtaatgttataacataagagtattaacatagatggtgcatttcattgtatcaaaagccaaatccacaatcagcttttaagaatcccccttgtgaaaataacattccagaagcaggattgtgagaatcaaaagcaaaataaacaggccccgacaatggtacaataaggatttttttcatacaaatattatgagagatttctagtttcagtacaaacatttctaaaatatttaatctaataagtcagcctaaaggtaaatgctcacctctacctcattagtgttaaacttttaattagtctgttaggatgagatgagcactaatgatatgggtgtctgatggcagcatgatcagcaagtgatgtgtatagaaattacaacaatattcagaaataagttatgttttacaacaatatgttcatcttaatatttttaataaatatagtactagtacatatgttgtgcatactggcattagataaacataggaacaggaacataatatttccaaaatgattaatgagtcattaagcaaagtggatcatttgtacatatcatataatcatgtattgctgtgttgttcaccatgtctaagcagatgacagaatttgtatctttgatcatatgattctggcttttggtattttgatggttgatattgatactagtattgtttatgataagggatatcatgaggtactatttttttttctggttgtgtatgagtcagcattgataggcaagtgaactaagaatcaaatttattctatgagatcataagatgtatttgtttcacttcttaacatcatgaggtatttattcttacatctcctgaaggagaagcgtgggctgtgaatgtgtcgtgatatgttgggttgtcacttgttacataaatgtagtaattaactttgattcagtttgatgcaataccatgctatgagaaatattaggatccgttgtcctacttatcattcttgcttttttataagcttttttttaataagcaagataattgggtaccatttcattaagaggagagaatggaaagggagcagtggccaccaacccggtccaaaacaggccagagtctttacaacacacgcaaaaacctcacctccgaggggctatcgacctctcacggaactcctttagtctagaagccccggctagcgaccacatgatacacttattggccactgtttggaggacagcagttacacaagggttaacaccattaagcacattgtcatttctatgcttcccaatctcccacagtaccaaaatgatgagagctaagtccgttcttggtgtctttgtcccttcctctcatcacccttgaccaccaccttgataaattggttgtatctggacctggggctatatgggccagccccatcctttggaggattataaaccaaacttgccgtggacacctcttatcttaattatttgattggccattaatgttataaatcacaaggcatggctgaaaattgatgttaagttaattatgccacatattatcacttttccatactgaggctattgcatttgtctttattcttacattatggtgttttgtgcagatttgaatatccagtcgcccccatcaatttatccacccaagagatattgtgacataactggttttgaggttagttactttgctgtgagttcgtcttgttggatttgcatgttttcttgttattttgaatgttcattttatgctacttactactgagtttaaattgatctaaatatcttctgagctagatgggctatacaatatctcgcggtttagtaatattatcaaagtcgacattctttgagttggatctcaaatgctcaaattaaaatcccgtatatgattagcatcagatcaataatccacagaaaatgttatcacaatagacaagctacatgtctggagaattcaatcctctgtaaaggattacgaacacatgcatgtatacagcaacaaaagattccagcaattaaatcttttggaattgttaggaaaaaaaaacatgtggtagtgatagtacaccattgtcattaactcactctataggcgaagatatccaattaaattctatataataactcaaccttttgtccatgctatcatcggatccttattttccaccctctgaactttgaaatcctcaacctttacatctctctgttctaaaactgcctcagcatataccgtagtggtatttgcttgacgacagtcatcagtagattggatatcttccatgcctacttttccttcttattgttgtcaaatatcaaatctcttcctctgtctgtttaaaaaaaatacattctcaatgtgacctaggctaaactcaagtgcatagcttcatggcctctgagctccaccacaggtgcaattttccctagtatgtcatcatgccttctacatctctcctagtcagcaatccatgccacctcccaaatcctcttttgctcctgcaaacacaatacatttcttgattcatttgatagagttgtgtagtattcgtgttagctaaatgaggagctggcccttagactgatcctacatgcagctcatactgcaaagctgccatctcaaattccttccctgttgtgaacgcctcatggacataaatgagctttatttccccacctgtaatcatggtggtgcatatgagggtggaggatcgttgcttacattaccactgaatcatgtgtcgctaacatgtccaacatgagatagtatctcaaattctcaattctactgcagacaagttactgagcatgaaattgaggctgcctgagaggtactgagagcgcgagggagtgaatatggaattgctgttgttttcagttatcttgtttaaattgttactagttacctggctaaatcagcaatagaagatgacatttggagccttcttgttgccacataggccaaaactgtagtggattgggcttttaggtgtttcagtgcataagtattgttagtcgaacttagaagtccaattttggtcctaaatagcacttagttactactccctctctttcatattataagttattttgactttttcttagttaagcttctttaagtttgatcaagtttttagataaacatagtagcattttcaacacaaaataaatctattatcaaaatatattcattgttaatttggtgttttatatattgttaaatttttctataaacttagtcaaacaaaaaagtttgactaagaaaaaagtcaaagggacttataatatgaaatggagggagtattaggtgtccaatttctctacttagagagcatttaagttactgttttggccaggatacttcactgacattgaaaaatgttagagcatatgtgactgacatgacgtttcaccaagaatttcctgttctatcttgttagtaatggtttgtcttggacatcaacttatctgtaatccactagaagctttatttgcgcccaacaacgctttaatgctcacacctaatactccgctaatggggagcacaaaataaactgagacaaacattgataatatcacttggtcttgcattctctatttgctcttcgactgcaatggtgttttgtgtgcctatttcttgtgttgtgtggataataattgtatattttcttgcaggcaccatatgtggatccaaggacaaagctgcgctatgctgatccagaagtgttcaagcaaatccgaatgcttcctgatgaatatgtccaaaggtatctggcactgagaaatgctgccgttgtactgagataactatgcaaaatctatgtagaagagaaatggggatttgtgctcttgagtctgttggcaaatacatctctagatctagtgtgaatgtatatctacttgtatgcttgtttcttagcaaattgtaagagatgacttttcctccgtagtgatagctgacatcatggctggggacgttcagttcgtgctttatcgacgttcatgaattactggtaatctgttctcgtgcaccatagccgaaattactttctggattgccctgatctttatcaaggaatgcaatgacggatg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0274400, RefSeq:Os04g0274400