Os04g0278101

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Revision as of 11:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0278101| Description = TolB, C-terminal domain containing protein| Version = NM_001186901.1 GI:297722932 GeneID:9269573| Length = 1293 bp| ...")
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Gene Name

Os04g0278101

Description

TolB, C-terminal domain containing protein

Version

NM_001186901.1 GI:297722932 GeneID:9269573

Length

1293 bp

Definition

Oryza sativa Japonica Group Os04g0278101, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:11795357..11796649

Sequence Coding Region

11795357..11795663,11795725..11795882,11795938..11796158,11796199..11796649

Expression

GEO Profiles:Os04g0278101

Genome Context

<gbrowseImage1> name=NC_008397:11795357..11796649 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:11795357..11796649 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatttggatccaattcaacatatttccgtcacggatgacagagtcgaagcggcgtccgtcgagcgaatcaccccgcgggggttccacgccttcacgccggccgcgtcgcccggtgcgccggggctcgtggcggtggcgaccaggcttgcgggctcggactaccgccacatcgaggtgatcgacatgagtgacgacaagaacgcctactttgaggtgaccagacccgtggcgccgcgcgtgcaccgtttcaacccattcatctcgctggacggcgcacgcgttgggtaccaccggtgctgggggagagggaacggcgactcgccgttgctgctggagaacatcaagagcccagtgccggcagacacgttctccttgttcaggatcgacgggtcgttccctccttctcgcacgacggcaagaagatcgcgttcgtcgggctgccggggatatcttctccgggaacgccttcctgacgtcgttggactggaagaggaaaggcgtgatatacacacaagcatcgggccggatttcgcgatcgagagcacggaggtggacgtggtggcgatctccctcggcgacgacgacgacaaaaccatctcgatgaagaagctcaccgtgggagacgagaacaacgcattcccgtcgccgccaccggacgggaagtggttggacggcgaggccggtggcatccggcggctgacggagggcccatggtcggacacgatgtgcaattggtcccccgacgacgagtggatcgccttcgcctccgaccgccatgccccggggagcggcagcttcgccatcatggtgcaccccaatggcaccggttcagactccaagagcctcgtcttcacctccgactacgccgccgtctccgccgagccggtctccaaccctcaccattaccagccatacggcgagatctacaccgtcgacatcgacgggtccaacatccggcggctcacgcacaactcgttcgaggacggcacgccgtcgtggacgccatacttcctggacccccgggacgtaggtgagacgctgcaagcctcaggcaggtgcgcgttccaggattgccactggctcaacatcgaagatgcccaacctgaagagctcatctatggcaagagctgctaa</cdnaseq>

Protein Sequence

<aaseq>MNLDPIQHISVTDDRVEAASVERITPRGFHAFTPAASPGAPGLV AVATRLAGSDYRHIEVIDMSDDKNAYFEVTRPVAPRVHRFNPFISLDGARVGYHRCWG RGNGDSPLLLENIKSPVPADTFSLFRIDGSFPPSRTTARRSRSSGCRGYLLRERLPDV VGLEEERRDIHTSIGPDFAIESTEVDVVAISLGDDDDKTISMKKLTVGDENNAFPSPP PDGKWLDGEAGGIRRLTEGPWSDTMCNWSPDDEWIAFASDRHAPGSGSFAIMVHPNGT GSDSKSLVFTSDYAAVSAEPVSNPHHYQPYGEIYTVDIDGSNIRRLTHNSFEDGTPSW TPYFLDPRDVGETLQASGRCAFQDCHWLNIEDAQPEELIYGKSC</aaseq>

Gene Sequence

<dnaseqindica>987..1293#768..925#492..712#1..451#atgaatttggatccaattcaacatatttccgtcacggatgacagagtcgaagcggcgtccgtcgagcgaatcaccccgcgggggttccacgccttcacgccggccgcgtcgcccggtgcgccggggctcgtggcggtggcgaccaggcttgcgggctcggactaccgccacatcgaggtgatcgacatgagtgacgacaagaacgcctactttgaggtgaccagacccgtggcgccgcgcgtgcaccgtttcaacccattcatctcgctggacggcgcacgcgttgggtaccaccggtgctgggggagagggaacggcgactcgccgttgctgctggagaacatcaagagcccagtgccggcagacacgttctccttgttcaggatcgacgggtcgttccctccttctcgcacgacggcaagaagatcgcgttcgtcgggctgccggggatgtacgtggtgaactccgatggctccgatggtcgccgcaagatcttctccgggaacgccttcctgacgtcgttggactggaagaggaaaggcgtgatatacacacaagcatcgggccggatttcgcgatcgagagcacggaggtggacgtggtggcgatctccctcggcgacgacgacgacaaaaccatctcgatgaagaagctcaccgtgggagacgagaacaacgcattcccgtcgccgccaccggacgggaagtggttggtgttccggtcggggaggtcgggggcacaagaacctgtacatcatggacgccaaggacggcgaggccggtggcatccggcggctgacggagggcccatggtcggacacgatgtgcaattggtcccccgacgacgagtggatcgccttcgcctccgaccgccatgccccggggagcggcagcttcgccatcatggtgcaccccaatggcaccgggttgcggcgggtggtgcacagcggcgacggcggccggaccgaccaaccacccatggttcagttcagactccaagagcctcgtcttcacctccgactacgccgccgtctccgccgagccggtctccaaccctcaccattaccagccatacggcgagatctacaccgtcgacatcgacgggtccaacatccggcggctcacgcacaactcgttcgaggacggcacgccgtcgtggacgccatacttcctggacccccgggacgtaggtgagacgctgcaagcctcaggcaggtgcgcgttccaggattgccactggctcaacatcgaagatgcccaacctgaagagctcatctatggcaagagctgctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0278101, RefSeq:Os04g0278101