Os04g0303100

From RiceWiki
Revision as of 11:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0303100| Description = Similar to Resistance protein candidate (Fragment)| Version = NM_001058945.2 GI:297602410 GeneID:4335421| Length = 2...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0303100

Description

Similar to Resistance protein candidate (Fragment)

Version

NM_001058945.2 GI:297602410 GeneID:4335421

Length

2508 bp

Definition

Oryza sativa Japonica Group Os04g0303100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:13602945..13605452

Sequence Coding Region

13602945..13603124,13603419..13605116,13605285..13605452

Expression

GEO Profiles:Os04g0303100

Genome Context

<gbrowseImage1> name=NC_008397:13602945..13605452 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:13602945..13605452 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctcctggaaatctcttcgccgacttcacggtgctggtggtcgtggtgctcgcagttgccgcaccaccggtgtccgggcagcgctccgtctatcccagtgccaacctctcgacactgtgggtcaaaaacaaagtccttgacagcgtcccatatgaagatgggttggcaagccctgtaggagagaatgctacccttgagctgactggagatggcgacctggtcctccgtgaaaaagccaatggcagactcatctggtcgagcggcacttcagaccaatccgtgcgacgcatggagatcactgagcaaggcaaccttgtgctgtttggtcagaggaacatgacagtgtggcagtcatttgatcatcccaccgacgcattggtcccagggcagtcactgctgcagggcaagatgctcagagcaaatgcctcccccacaaattggactgagggtaagatatatataactgttctccgtgatggtgtacatggttatgttgaatccacaccaccacaactatactttaagcatgagctgagcagaaacatgagccagagagatccaacaaggattacctttacaaatggcagcctcagcatctttttgcagtccacacatccaggaaatccagatgaaagtatccaattccaagaagctaagtccacccagtacataaggttagagtctgatgggcacttgaggctgtttgagtggtctcgtggagaaccaagctggatcatggtgtctgatgtaatgaaggaattcctacatgttgatgattgtgctttcccaacagtgtgcggggagtacgggatatgcacaagtgggcaatgcatctgtccctttcagagtaattctagttcacgttacttccagctagttgacgagcggaagactaatcttggttgtgcaccagtgacaccagtatcttgtcaagaaatcaaaaatcatcagctcttgactcttactgatgtttcttactttgatatgagccaaatcatcatgaatgcaaaaaatagagatgactgcaagcaagcctgcttgaagaattgctcatgcaaagcagtagcgttcaggtatggtcagaatgattccaatggagaatgccggtcagtgacagaggtattctccttgcagtcaatacaacctgaaaaggttaattacaactcttcagcttatctaaaggtacagattactccctcttctgaccctacacaaaaaaaattgaagacaattttaggtgctacacttgcagcaattactactcttgttttagttgttattgttgctatatatgtacgaaggaggaggaagtatcaagaactagatgaagaattagaatttgatatattgcctggaatgccaacgcggttctcttttgaaaagttaagagaatgcaccgaagatttcagtaaaaagcttggcgaaggtggatttggatcggtcttcgaaggaaaaataggtgaagagagtgtagcggtgaaacgtctggaaggtgctagacagggaaagaaggagttcttggcagaggtcgagactattggcagcattgagcacatcaatcttgtcaggctaattggattttgcgcagagaaatcaaataggcttctggtatatgaatatatgccaagagggtcacttgataggtggatatattaccgccacaacaatgctcctcttgattggtgcacaaggtgtaagatcattatggatattgccaagggtttatgttatcttcatgaggaatgcaggcgaaaaattgctcatctggatatcaaaccacagaatattcttttagacgagaatttcaatgctaaattggctgactttggactttccaagctaatagacagggatcaaagcaagaatgacagcagccggaggccttctatgtcaatggttgtcaaggtattggaaggtgcaatgagcgtggagaactgcctagattacagttttttcaatgcaaattcagtaatatctgctcaaggcaacccatctacatattcggctccacctcaagaatcaatactatctggtccaagatga</cdnaseq>

Protein Sequence

<aaseq>MSPGNLFADFTVLVVVVLAVAAPPVSGQRSVYPSANLSTLWVKN KVLDSVPYEDGLASPVGENATLELTGDGDLVLREKANGRLIWSSGTSDQSVRRMEITE QGNLVLFGQRNMTVWQSFDHPTDALVPGQSLLQGKMLRANASPTNWTEGKIYITVLRD GVHGYVESTPPQLYFKHELSRNMSQRDPTRITFTNGSLSIFLQSTHPGNPDESIQFQE AKSTQYIRLESDGHLRLFEWSRGEPSWIMVSDVMKEFLHVDDCAFPTVCGEYGICTSG QCICPFQSNSSSRYFQLVDERKTNLGCAPVTPVSCQEIKNHQLLTLTDVSYFDMSQII MNAKNRDDCKQACLKNCSCKAVAFRYGQNDSNGECRSVTEVFSLQSIQPEKVNYNSSA YLKVQITPSSDPTQKKLKTILGATLAAITTLVLVVIVAIYVRRRRKYQELDEELEFDI LPGMPTRFSFEKLRECTEDFSKKLGEGGFGSVFEGKIGEESVAVKRLEGARQGKKEFL AEVETIGSIEHINLVRLIGFCAEKSNRLLVYEYMPRGSLDRWIYYRHNNAPLDWCTRC KIIMDIAKGLCYLHEECRRKIAHLDIKPQNILLDENFNAKLADFGLSKLIDRDQSKND SSRRPSMSMVVKVLEGAMSVENCLDYSFFNANSVISAQGNPSTYSAPPQESILSGPR</aaseq>

Gene Sequence

<dnaseqindica>2329..2508#337..2034#1..168#atgtctcctggaaatctcttcgccgacttcacggtgctggtggtcgtggtgctcgcagttgccgcaccaccggtgtccgggcagcgctccgtctatcccagtgccaacctctcgacactgtgggtcaaaaacaaagtccttgacagcgtcccatatgaagatgggttggtacgtgccatagtcctccgatcaccacaaacctccgatctctcatttgccgcagggttcttctgcaccccaccctgccaagaattcatcttcgcagtcttcattttccctgacacagattctttcccggtaaataaaatggcacgggttgtctggtgtgccaaccaggcaagccctgtaggagagaatgctacccttgagctgactggagatggcgacctggtcctccgtgaaaaagccaatggcagactcatctggtcgagcggcacttcagaccaatccgtgcgacgcatggagatcactgagcaaggcaaccttgtgctgtttggtcagaggaacatgacagtgtggcagtcatttgatcatcccaccgacgcattggtcccagggcagtcactgctgcagggcaagatgctcagagcaaatgcctcccccacaaattggactgagggtaagatatatataactgttctccgtgatggtgtacatggttatgttgaatccacaccaccacaactatactttaagcatgagctgagcagaaacatgagccagagagatccaacaaggattacctttacaaatggcagcctcagcatctttttgcagtccacacatccaggaaatccagatgaaagtatccaattccaagaagctaagtccacccagtacataaggttagagtctgatgggcacttgaggctgtttgagtggtctcgtggagaaccaagctggatcatggtgtctgatgtaatgaaggaattcctacatgttgatgattgtgctttcccaacagtgtgcggggagtacgggatatgcacaagtgggcaatgcatctgtccctttcagagtaattctagttcacgttacttccagctagttgacgagcggaagactaatcttggttgtgcaccagtgacaccagtatcttgtcaagaaatcaaaaatcatcagctcttgactcttactgatgtttcttactttgatatgagccaaatcatcatgaatgcaaaaaatagagatgactgcaagcaagcctgcttgaagaattgctcatgcaaagcagtagcgttcaggtatggtcagaatgattccaatggagaatgccggtcagtgacagaggtattctccttgcagtcaatacaacctgaaaaggttaattacaactcttcagcttatctaaaggtacagattactccctcttctgaccctacacaaaaaaaattgaagacaattttaggtgctacacttgcagcaattactactcttgttttagttgttattgttgctatatatgtacgaaggaggaggaagtatcaagaactagatgaagaattagaatttgatatattgcctggaatgccaacgcggttctcttttgaaaagttaagagaatgcaccgaagatttcagtaaaaagcttggcgaaggtggatttggatcggtcttcgaaggaaaaataggtgaagagagtgtagcggtgaaacgtctggaaggtgctagacagggaaagaaggagttcttggcagaggtcgagactattggcagcattgagcacatcaatcttgtcaggctaattggattttgcgcagagaaatcaaataggcttctggtatatgaatatatgccaagagggtcacttgataggtggatatattaccgccacaacaatgctcctcttgattggtgcacaaggtgtaagatcattatggatattgccaagggtttatgttatcttcatgaggaatgcaggcgaaaaattgctcatctggatatcaaaccacagaatattcttttagacgagaatttcaatgctaaattggctgactttggactttccaagctaatagacagggatcaaagcaaggtagtgacagtgatgagaggcacacctggatatctggcacctgaatggttaacatcgcagatcactgaaaaagttgatatatacagctttggagttgttctcatggaaataataagtggaaggaaaaatattgatctctcacagcccgaggagagtgttcagctcatcaacctattacgagaaaaggctcaaaacgatcagttgcttgatatgattgataagcacagtaatgacatggtgtcacaccaggaggaagtgattcaaatgatgaagcttgcaatgtggtgcttgcagaatgacagcagccggaggccttctatgtcaatggttgtcaaggtattggaaggtgcaatgagcgtggagaactgcctagattacagttttttcaatgcaaattcagtaatatctgctcaaggcaacccatctacatattcggctccacctcaagaatcaatactatctggtccaagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0303100, RefSeq:Os04g0303100