Os04g0311400

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Revision as of 11:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0311400| Description = Similar to Cysteine proteinase 1 precursor (EC 3.4.22.-)| Version = NM_001058975.1 GI:115457679 GeneID:4335455| Leng...")
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Gene Name

Os04g0311400

Description

Similar to Cysteine proteinase 1 precursor (EC 3.4.22.-)

Version

NM_001058975.1 GI:115457679 GeneID:4335455

Length

2507 bp

Definition

Oryza sativa Japonica Group Os04g0311400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14179680..14182186

Sequence Coding Region

14179681..14180098,14180142..14180221,14180331..14180450,14181393..14181636,14181719..14182011

Expression

GEO Profiles:Os04g0311400

Genome Context

<gbrowseImage1> name=NC_008397:14179680..14182186 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:14179680..14182186 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acacaagaaatctcacccaaaaaaaaaaaaccaaccaatcaaaaaccaaaccatggcgcgccaccgccaccgcctcgccgccgccgcggcgctcctcctcctcctcctctcctccgccgccgcgctgtcgtcatcggcggcggagggggaggaggacccgctcatcgagcaggtggtcggcggcggggaggaggaggacgcgcagctggacgcggaggcgcacttcgcgagcttcgagcggcggttcgggcggacgtaccgggacgccggcgagcgcgcgtaccggatgtccgtgttcgccgccaacctccgccgcgcgcggcggcaccagcggctggaccccaccgcgacgcacggcgtcaccaagttctccgacctcaccccgggcgagttccgcgaccgcttcctcggcctccgccccccatcctccccaccgacggcctccccgacgacttcgactggcgcgagcacggcgccgtcggccccgtcaaggaccagggttcgtgcggatcgtgctggtcgttcagcacgtcgggggcgctggagggggcgcacttcctcgccacggggaagctggaggtgctcagcgagcagcagatggtcgactgcgaccacgagtgtgatgcatcagaatcgcgcgcatgcgactcaggatgcaacggtggcttgatgaccacagccttcagctacctcatgaaatccggtggcctacagagcgagaaagattacccgtacgctggacgagaaaacacctgcaagttcgacaagtccaaaatcgttgcccaagtaaagaacttcagtgtgatctccgtcaacgaagatcaaattgctgccaacctcgtcaaacatggccctcttgcaattgcaatcaatgcggcctacatgcagacatacatcggcggcgtgtcgtgccccttcatctgtgggaggcaccttgaccatggtgtcctccttgttggctacggatcggcaggatacgcaccgatccgcttcaaggagaagccgtactggatcatcaagaactcgtggggcgagaactggggggagaaggggtactacaagatctgcaggggacctcatgacaagaacaagtgcggtgttgattccatggtctcctcagtgactgccatccatacctccaaaaaggaggagtag</cdnaseq>

Protein Sequence

<aaseq>TQEISPKKKKPTNQKPNHGAPPPPPRRRRGAPPPPPLLRRRAVV IGGGGGGGPAHRAGGRRRGGGGRAAGRGGALRELRAAVRADVPGRRRARVPDVRVRRQ PPPRAAAPAAGPHRDARRHQVLRPHPGRVPRPLPRPPPPILPTDGLPDDFDWREHGAV GPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDASESRACDSG CNGGLMTTAFSYLMKSGGLQSEKDYPYAGRENTCKFDKSKIVAQVKNFSVISVNEDQI AANLVKHGPLAIAINAAYMQTYIGGVSCPFICGRHLDHGVLLVGYGSAGYAPIRFKEK PYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTAIHTSKKEE</aaseq>

Gene Sequence

<dnaseqindica>2..419#463..542#652..771#1714..1957#2040..2332#cacacaagaaatctcacccaaaaaaaaaaaaccaaccaatcaaaaaccaaaccatggcgcgccaccgccaccgcctcgccgccgccgcggcgctcctcctcctcctcctctcctccgccgccgcgctgtcgtcatcggcggcggagggggaggaggacccgctcatcgagcaggtggtcggcggcggggaggaggaggacgcgcagctggacgcggaggcgcacttcgcgagcttcgagcggcggttcgggcggacgtaccgggacgccggcgagcgcgcgtaccggatgtccgtgttcgccgccaacctccgccgcgcgcggcggcaccagcggctggaccccaccgcgacgcacggcgtcaccaagttctccgacctcaccccgggcgagttccgcgaccgcttcctcggcctccgccgcccatccctggagggcctcgtcggcggggagccgcacgaggcccccatcctccccaccgacggcctccccgacgacttcgactggcgcgagcacggcgccgtcggccccgtcaaggaccaggttaggatcggatcacaccatcggattaatttgggatggattgaaaatttgaaatcgttggagttgtttgatgatgattggttggtggatttggggggtgggggtgtagggttcgtgcggatcgtgctggtcgttcagcacgtcgggggcgctggagggggcgcacttcctcgccacggggaagctggaggtgctcagcgagcagcagatggtcgactgcgaccacgaggtatgtccctctccttcgtcttcgtcttcctcctcgcatatcatcatcaagctcttaagtttcttcttcttcttctcgaattgctagctctcgttgactatgagttaatggaactcggtttgattttaattttgattcgagtagatagaatagaaggaatgacgcagagggatattcccgtgggttgctttgttgtgaccagggttaaacctaacggtttagccgatttgatcggtgcccactgaaatgctgaaatttttcggtccgaaattttcgaaattttgaacaaaatttaattgaatttgaacaaatattattaaaattcatgaaaatatttgaaaatttcgaccgaaataatatcgtatcggagggggtccgaaatgaccgaaatttccaaccctggttatgacttactagctgttgtgttgtccttatcttggtttattctgtcctggttggtgagcgacagaaactgtagagtgaaagcaagttggagactcagttctttctcacttgaagcaagttttttggtgctttggatgagaagtaattattttatttaaccaaatttatcccaaataaattcgattgcgtcttacacattttgtagtagacttcacattttaaggttgtattcttacctcttaggttcccaacctccactctctcatttaccgcacgcatgcttcctgaattattaaacatttttgcaaaaattcctatagaaaaattgttgtaaaaaaaccatattaatttattttcaagttttttagctaatacttaattaattatatactaataagcaatcctgttttccttgcccaaaggagagtcccatcatctccttccgaacacagccttatccacatgttatctttaccatttttaatttcatcaaaaggtgcagctaatatatatgctatgctcttgtaaaatttgcagtgtgatgcatcagaatcgcgcgcatgcgactcaggatgcaacggtggcttgatgaccacagccttcagctacctcatgaaatccggtggcctacagagcgagaaagattacccgtacgctggacgagaaaacacctgcaagttcgacaagtccaaaatcgttgcccaagtaaagaacttcagtgtgatctccgtcaacgaagatcaaattgctgccaacctcgtcaaacatggccctcttgcaagtaaaggattcaaacatttgcaaaaatttgaacaaattgctgtcatccgtttgtctattgctgatgtttttgttttttgcagttgcaatcaatgcggcctacatgcagacatacatcggcggcgtgtcgtgccccttcatctgtgggaggcaccttgaccatggtgtcctccttgttggctacggatcggcaggatacgcaccgatccgcttcaaggagaagccgtactggatcatcaagaactcgtggggcgagaactggggggagaaggggtactacaagatctgcaggggacctcatgacaagaacaagtgcggtgttgattccatggtctcctcagtgactgccatccatacctccaaaaaggaggagtaggataggattagtctcctctttgtctttgcataccacacactttgtaatttgctcttttgtggttgaaactgttagtggttaggaccattctgtggtgttgctcgattgctatttatgatcagcaaaaactgtgaaaacttcctttacttgatgtaatagtacatatttgttcgga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0311400, RefSeq:Os04g0311400