Os04g0312100

From RiceWiki
Revision as of 11:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0312100| Description = Protein of unknown function DUF860, plant family protein| Version = NM_001058978.1 GI:115457685 GeneID:4335458| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0312100

Description

Protein of unknown function DUF860, plant family protein

Version

NM_001058978.1 GI:115457685 GeneID:4335458

Length

1727 bp

Definition

Oryza sativa Japonica Group Os04g0312100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14236128..14237854

Sequence Coding Region

14236318..14237826

Expression

GEO Profiles:Os04g0312100

Genome Context

<gbrowseImage1> name=NC_008397:14236128..14237854 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:14236128..14237854 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccaccgcctcctcctcctcctccctctccttcctctcgccgcaacccatccacccccgccgcgtccgcctccccaatcccccgccctccaccgccgcgccgcccactccgacggccgtacgctgcacgcccgcgcccgcggcggcgccgtcggcggcgtctgcggcgtccgcgaggtcaatcccgccgccgaagctggtgcggtgcccggcgctggaccgccaggcggcgcgcgccaaccgcctccgcttcgcccgcaagctcctcgtcctgctcctctccaagccgcgccgcttcctcccgctccgcgtgctccgccgctgccaccgctacctcggcctcccgccgcaccgccgccgccgcccgctggtcccgttcgtgctccggtacccggcgctgttccgcctcttccaggcgcccacgtcgcacccgctctcgcccaacctctccaccctcgccgtcgcgctcacccccgccgcggaggcgctcgccgccgacctcgccgcgctccgtggctcctccgagctcgcgccacgcctcgccgccaagatgcaccgcctcctccttctggcacccgggcggagcctcctcgtgtccaagattgctcacctcgcacccgatctcggcctcgccatggacttccgcgccacgctctgcccgcagcaccccgacctcttcaccttcgtgaacacctcccacggccacgcactccagctagtcgatcccccgccgccaccgcctccgccgctcccgcctttccgccccgcggcgccatccgaccgcctcattgaccggccacgaaggttcccccacctcaagctccggcgagggctcaacctccgccgcgcgcaccgggattacctcttgcggttccatagcctgcccgaggtgtcgccattcgagccactcgatgagggcgcaagcttggagatgatggagcgacgggcgtgcgcggttgtccgggaggtcctggccatgactgtggagaagagaacactggtggatcatctcacacatttcaggcgtgatttcgggctaccgaaccggctgcgcgcaatgctagttcggcacccagagttgttctatgttagtgtcaaggggttgcggcactcggtgttccttgtcgaggcgttcgacgatgacggtaggctacttgtggaggatgatatgcttgttgcgagggatcggcttgaggagcttgtccgcgaggggaagcggatgaggcgggctaagaagaagggccttcttgctcttgcggatgacagtgatgaagatgatgaagaggaggatggggaagaacaggattcggtacaggtcgatggtgaatcttgggacttgttagaggatggtggcattggcgaggactgggaggaggtgggtgatcttggtgaggggagcgatgacgatgctgatgctgaattggatgcgttggaggagttttgggtgaagaaagctgtggccgaggggttggttgacactgggagcgagcttgatgcttggtga</cdnaseq>

Protein Sequence

<aaseq>MATTASSSSSLSFLSPQPIHPRRVRLPNPPPSTAAPPTPTAVRC TPAPAAAPSAASAASARSIPPPKLVRCPALDRQAARANRLRFARKLLVLLLSKPRRFL PLRVLRRCHRYLGLPPHRRRRPLVPFVLRYPALFRLFQAPTSHPLSPNLSTLAVALTP AAEALAADLAALRGSSELAPRLAAKMHRLLLLAPGRSLLVSKIAHLAPDLGLAMDFRA TLCPQHPDLFTFVNTSHGHALQLVDPPPPPPPPLPPFRPAAPSDRLIDRPRRFPHLKL RRGLNLRRAHRDYLLRFHSLPEVSPFEPLDEGASLEMMERRACAVVREVLAMTVEKRT LVDHLTHFRRDFGLPNRLRAMLVRHPELFYVSVKGLRHSVFLVEAFDDDGRLLVEDDM LVARDRLEELVREGKRMRRAKKKGLLALADDSDEDDEEEDGEEQDSVQVDGESWDLLE DGGIGEDWEEVGDLGEGSDDDADAELDALEEFWVKKAVAEGLVDTGSELDAW</aaseq>

Gene Sequence

<dnaseqindica>29..1537#cccacacattccccacaatccgctcgccatggcgaccaccgcctcctcctcctcctccctctccttcctctcgccgcaacccatccacccccgccgcgtccgcctccccaatcccccgccctccaccgccgcgccgcccactccgacggccgtacgctgcacgcccgcgcccgcggcggcgccgtcggcggcgtctgcggcgtccgcgaggtcaatcccgccgccgaagctggtgcggtgcccggcgctggaccgccaggcggcgcgcgccaaccgcctccgcttcgcccgcaagctcctcgtcctgctcctctccaagccgcgccgcttcctcccgctccgcgtgctccgccgctgccaccgctacctcggcctcccgccgcaccgccgccgccgcccgctggtcccgttcgtgctccggtacccggcgctgttccgcctcttccaggcgcccacgtcgcacccgctctcgcccaacctctccaccctcgccgtcgcgctcacccccgccgcggaggcgctcgccgccgacctcgccgcgctccgtggctcctccgagctcgcgccacgcctcgccgccaagatgcaccgcctcctccttctggcacccgggcggagcctcctcgtgtccaagattgctcacctcgcacccgatctcggcctcgccatggacttccgcgccacgctctgcccgcagcaccccgacctcttcaccttcgtgaacacctcccacggccacgcactccagctagtcgatcccccgccgccaccgcctccgccgctcccgcctttccgccccgcggcgccatccgaccgcctcattgaccggccacgaaggttcccccacctcaagctccggcgagggctcaacctccgccgcgcgcaccgggattacctcttgcggttccatagcctgcccgaggtgtcgccattcgagccactcgatgagggcgcaagcttggagatgatggagcgacgggcgtgcgcggttgtccgggaggtcctggccatgactgtggagaagagaacactggtggatcatctcacacatttcaggcgtgatttcgggctaccgaaccggctgcgcgcaatgctagttcggcacccagagttgttctatgttagtgtcaaggggttgcggcactcggtgttccttgtcgaggcgttcgacgatgacggtaggctacttgtggaggatgatatgcttgttgcgagggatcggcttgaggagcttgtccgcgaggggaagcggatgaggcgggctaagaagaagggccttcttgctcttgcggatgacagtgatgaagatgatgaagaggaggatggggaagaacaggattcggtacaggtcgatggtgaatcttgggacttgttagaggatggtggcattggcgaggactgggaggaggtgggtgatcttggtgaggggagcgatgacgatgctgatgctgaattggatgcgttggaggagttttgggtgaagaaagctgtggccgaggggttggttgacactgggagcgagcttgatgcttggtgaagcggacaatggcaatctgatgatctggtttatgagcattcagccctgcacgtttctgaagattttgctgactaagaattgctcaagtgcattcttcctagcgatgtacagaagctagaaaccattagcacataaccttttcttatctgctgtaattctctctcttacaaaataaaggtgtgttcttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0312100, RefSeq:Os04g0312100