Os04g0321400

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Revision as of 11:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0321400| Description = Similar to 50S ribosomal protein L27| Version = NM_001058996.2 GI:297602461 GeneID:4335476| Length = 6275 bp| Defin...")
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Gene Name

Os04g0321400

Description

Similar to 50S ribosomal protein L27

Version

NM_001058996.2 GI:297602461 GeneID:4335476

Length

6275 bp

Definition

Oryza sativa Japonica Group Os04g0321400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14849250..14855524

Sequence Coding Region

14849250..14849276,14850798..14851410,14854941..14855062,14855288..14855524

Expression

GEO Profiles:Os04g0321400

Genome Context

<gbrowseImage1> name=NC_008397:14849250..14855524 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:14849250..14855524 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcgtgatgcggccggaagttccattgagtgatgataactttattgcttcaatggctgtgccaatggcagaaaaaattgagaaatattgggagacatgcaacaagttattatctattgcaaccattcttgatcctcgctacaaattgaagtctattgagtacttctatggattgctttatccttctgaaaaagatgtgaaatttgaacatatgaggagatgctttagtgaattatttgatgagtattcaaagcaagcaacaatgcaatcctcatcagttgtcgacacttcaagaaatttccaggagtgcagttcacaatcacatgagtcctcgttgagcttattttctaccatagtaggattagaaaagtatatccaagatagcaactcaagccagcaaacaagatcagagctcgatgtctatcttgatgatcctccacatcctggaatcagtgatacttcttttgacatcttggcttggtggaagttgtatggttccaaatatccaattatttctcgaatggctcatgatatcttaagtgttcctatgtcaacagtagcatctgaatcatgcttcagtttagctaatcaagcactttgtgagaagaggtgcagtctactgcctgaaacacttgaagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctggatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcggagagaaagtggagccaggaaacatcatcgtccgccaaagaggaacccgcttccatcctgggaactacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgattcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatgtgctccaccctgtctacaccagtgattcgacccctgcagctgaaatggagccattgtaa</cdnaseq>

Protein Sequence

<aaseq>MIVMRPEVPLSDDNFIASMAVPMAEKIEKYWETCNKLLSIATIL DPRYKLKSIEYFYGLLYPSEKDVKFEHMRRCFSELFDEYSKQATMQSSSVVDTSRNFQ ECSSQSHESSLSLFSTIVGLEKYIQDSNSSQQTRSELDVYLDDPPHPGISDTSFDILA WWKLYGSKYPIISRMAHDILSVPMSTVASESCFSLANQALCEKRCSLLPETLEESSGG LSLIFKRWATKKTAGSTKNGRDSNPKYLGVKKFGGEKVEPGNIIVRQRGTRFHPGNYV GMGKDHTLFCLKEGHVRFERNKLTGRKWVHVDPVAGHVLHPVYTSDSTPAAEMEPL</aaseq>

Gene Sequence

<dnaseqindica>1..27#1549..2161#5692..5813#6039..6275#atgatcgtgatgcggccggaagttccagtaagtggagaggacctgctgtacctgtagatgttgctattttatactgacaaccattcatgtggtatgtctttaggcagtagaatgaattttatttcaaatgagctccattggtgatattcaaagcttcgatggaaatctagaattgcaaaatttttcacatgaatcatctgacgagtggcatgatgatgggtaatgtttctacttcacacttctagttaatcgtctttctttatttatttttcatgctaatagaactccaatcttttatagtgtgtttaatgtggattttgctttagaatttactaatacagtacttttgtcgattcaattccatagagttgagggaataattgagctaggtaaatatgttagttcagacaacagaaagttcagatcgaaagtttggaaggattttaaagtgtcagtagtggatggttatactaaggcaatatgtttacaatgttctgcccatctagtcactggcaacaagaatggaacaagtcatttgtgttatcacatacgtgtttgcccagagcttcaaaagtcaaagaaaaagagaactacttcaaaggcagaatttcctgtttttgatcagcaaagaagtcgtgatgacttttgctcgaatggttgtttgccataattatccattttgtatgtctgagtattattacacaaggcaattcatttataatctgcaacctcaatttaagataatgcatagaactgctgtgaaagatgatatcattaagttatataaggagggaaaaaggaagatatatgaaatattggataaaaatcagagcctgaatgagtgaaatgacaggctatatgagcatgacagtacattacattgatgctcattggaaattgcacaaaaaaaattttgggcttgtgcatgtcaaaaccccacacactggtgttgtcatttctaaggcaatcatggctagattgtatgaatggaatttggatagaaaactctttagctttgttcttgataattgctcagtcaatgatgtagtgattcgggaaatacttggtatccttttacccaagcaagcattacatttaaaaggtgaattctttcaaatccgatgtgcaatgcatatattgaacttaatagtttaggatggattgaaagtaattgcccccattctggtaaatattcgagagacaattagttatatcaacaaatccacgtcaagattggaaaagtttgaattgattacccaacaagtgaatgctcccaagttatctttagaaactgatactccaaccagatggaattcaacttttcacatgcttgagagaaccattaaattccgtgaagcttttctgtgattgaaagaatgtgacaagtttttcccatcagatgaggactgggtacatgttactaaagtaacagattgtttgcgtgtcatttatgaagcaactctgagggcttctggctcaaaattttccacagcaagtctttacttcaatgatttttgtggaatatatatttttctgcaagaattgaagttgagtgatgataactttattgcttcaatggctgtgccaatggcagaaaaaattgagaaatattgggagacatgcaacaagttattatctattgcaaccattcttgatcctcgctacaaattgaagtctattgagtacttctatggattgctttatccttctgaaaaagatgtgaaatttgaacatatgaggagatgctttagtgaattatttgatgagtattcaaagcaagcaacaatgcaatcctcatcagttgtcgacacttcaagaaatttccaggagtgcagttcacaatcacatgagtcctcgttgagcttattttctaccatagtaggattagaaaagtatatccaagatagcaactcaagccagcaaacaagatcagagctcgatgtctatcttgatgatcctccacatcctggaatcagtgatacttcttttgacatcttggcttggtggaagttgtatggttccaaatatccaattatttctcgaatggctcatgatatcttaagtgttcctatgtcaacagtagcatctgaatcatgcttcagtttagctaatcaagcactttgtgagaagaggtgcagtctactgcctgaaacacttgaaggtgtgatttgtacacaggattagctgagggattatataccaggtacagatctccaataaaagagtaaaatattgtattgcaattttgatgaatttgctaatcactttttttttctggagcagatgagtttttggaacagatgatagcagaagatgtgtcatgtactcaagaacaagcagttgtagatcaacttgaatgaagatgtgctgtgatgattgaggcacttggatcagttgccaattactagtgacctacctagcacattgtatcaactagtcgaatatttcaaactcagtacttttcacggtctagtttcatttttaactcacttaatcagctagtagcagaaagcatatgtactcctgttattaacagctttgttgtaccttaaattgtggggtttcatatctaattttccttttaaatgatatggctattacccaactctctttatccacacctatcagttttatccattccccaacgggtatgggtaatttagatgacaatgaatatggggagggtaagaacgactaaggtttgaagtgggtgagggtatgggtaagcatggggatccccgaaccctccccaacggcaggtgtttgaggtctttggatgactggaggttgaagaaagcgtgaaattgtgtcgacgaacgcagttgggccaggctcacttagagcagatacaatagcagactattagccagctataaacatattttaataagataaaagatgatatagaaaagcagcgggctacagatctgtagccagctgcagcatgaactccaagacataatgtgtgtataacagatgagaccatacattaatattatagtaagcaactattgtatgagttggctattagattggctatagatgaattggagctagtagtgggctatactattaaacttgctcttagaaaaggaattcccttagaaattaggctacaggcccacatgccacatctagcccccagcggcccagcccaagtggccaaatacctaattccccaatcccccagccccaaatcccctagcagaaggcagtgagctccccgtgcggcggcgccggcgaggcagcaggcagaagcgcgcggcgcggcggcgggcggcggcagcaggcagcaggcgaagcgcgcggcgctgcgagcgcgagcagccgcaggccagtggcggcggaggctgcaggccggcgccggcgacgccacggcagcatgtgaaggaccaggcgagcagcaggcagccccttagcccgacggctgcaaaatacaaggtatgcaatgttttgtctcatactctcatgtacagattttgcctcgtgaaagataatccgcgtcgcacgtgagaaaataatcaattgtcttgtgaatgaagttgtgatgtactgatatttctcattatctctctgtttccatatgaaacttcttttagggtgtgtttgaggagaaggggattgaggaggttggaaagatacgcaaaacgaggtgagccattagcacatgattaattgagtattaattattttaaacttcaaaaatggattaatatgattttttaaagcaactttcctatagaaattttttgcaaaaaacacaccgtttagtagtttgggaagcgtacgcgcggaaaatgaaacaatctttttccctttctcctacgctcgaacgcagccttagagtacaacgtaatattatgctattgtaatattgtttgagacgttatgtgcttatgccggtgttcccagtatgttgagccccccccccacccccaatttttcattcctggatccaccactgttggatccagtatgttgagctgccactgttggatccgaggagactcccgtccgctgctgctggtgagctccccgatttggggacttcgcgaacccttgtttgttcgtttgtttggccatggcgatgttggatggctttaggttgactatgaatttttggagtttgcggttgccaagaggggaaaaaaatggtttgtttcatcatttaggctattttgtagatgagggaattggcagttctctgcctatttttcgctattgtacagtttttatagcctgtttgagtttctgaatctctggtcttgccatcgtcaagggggcaggtggcttgttgagtcagtgtatgtagtccatgcgggcaccaactgttcgatggattgccccttaggcaggaaatggcagtgactgtagaatgcatgtgcttggtgaactgccagccttgcattgcttccctgagaaggctattcgttcgttccccctgtatcctgaggatgtgctggctgtgctggccaatggccacaagaagcaggtttagttcagcctttcaatccagaaattttcttcgtgatatggtgcttgataggctagtggaagaggcctcagggggcaacttttataatcttcacaacccaatatgttgatgtatagtctttacctttacatgcatatttgatttttttttctagaaattttgtctcaatcaaacttgaaatttcttgctactcagttttctaattttgcttgctccaatcaagtaagttttttccaataagttttctgtgtttgaagttataatatgtacccgttatgaactgtatagtagtgatagtaaatatagctatagtaaacattatttatggtttgagtatcttcagcaatccatgaattgcgtgagattatgaaacatctttctatggaactagtgcattcttgttcatagttctcgttgaaatagcaaactctggttatggatatatttgaccttttcatagttctccaaagaatgagatgaggtcatgtttactttcctaattttgctcaggtctacaactctaaatatgactatacttgtaaaatcgccttgacgatctccccaatttatggagtttttatggcattgtacattggtattttcttatggtcacattcatatttacttgtctccaatagttttatttataagagatgttgaggagcaaacactgcatatctttacacttcacatacgaatatactttgtgctttgctgcctagattactgcatctacttttttgttaaattcaatttcttgcataaaatggggataagttaactgagagtttcagtagactagtacatcacaacctaggtaatttgaagaattagctactatgattctttgttgaaacttaggtttagtaaaatagagtaaccagataataggttctatcaaatggaaactggagaaggtacttccatagtcgtatcattgttaatttcgccctcagtataatattagtgttgaatatatgaaagattgctttcgatgatttcaggtgatttgagacaatcaagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgtttcggtctacactagcacagtaggtaatggctttggctttaggcagtctgagactcttgactgacttgagtctgtatttgcgctattctttgaatgacaaaatatacctcattgcagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctggatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcggagaggtacaatcttgtgatctgtcatatgactttcatgttttttattgtttatgacagtacaaagtactttctttaatcacgtaaaagtaatcagacttcggagatttgtgtgtcccttctgatcccgtacctgaactcctgaagcaacttgtcatttttgttattagaacaaaaaggtgaaaaagatctaaactgttcctgaacatcaacatttgcatcattttttagaaagtggagccaggaaacatcatcgtccgccaaagaggaacccgcttccatcctgggaactacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgattcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatgtgctccaccctgtctacaccagtgattcgacccctgcagctgaaatggagccattgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0321400, RefSeq:Os04g0321400