Os04g0331600

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Revision as of 11:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0331600| Description = Peptidase A1, pepsin family protein| Version = NM_001186944.1 GI:297723018 GeneID:9267642| Length = 4619 bp| Defini...")
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Gene Name

Os04g0331600

Description

Peptidase A1, pepsin family protein

Version

NM_001186944.1 GI:297723018 GeneID:9267642

Length

4619 bp

Definition

Oryza sativa Japonica Group Os04g0331600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:15493456..15498074

Sequence Coding Region

15494167..15494385

Expression

GEO Profiles:Os04g0331600

Genome Context

<gbrowseImage1> name=NC_008397:15493456..15498074 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:15493456..15498074 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caacaaactggaagcttaaacaattcagaactagcgattgatggaattattggttttggcaattcaaatcagacattgctatcacaattggctgcagcagggaagacaaagaaaatattttctcattgccttgattccacaaatggtggtggaatttttgctataggagaagtggtggagccaaaagtaaaaacaacacctatagtaaagaataagtga</cdnaseq>

Protein Sequence

<aaseq>QQTGSLNNSELAIDGIIGFGNSNQTLLSQLAAAGKTKKIFSHCL DSTNGGGIFAIGEVVEPKVKTTPIVKNK</aaseq>

Gene Sequence

<dnaseqindica>3690..3908#tagatgaggaccagatgacgaaccaacaattaccatttaaaactccataaaatacaaaagggaagggatgatacgtactttgctgaagagatggcagctcctttgttgttatcaacaatcatttcggctctagtggtggtagcatcctctactcgtggtaccatggctaatggtgtattccaggtgcgccgcaaattccatatcgtggacggtgtgtacaaggggagcgacataggtgcattacaaatccatgatgggaaccgccatcgtcgccataaccttatggcttcggagctcccacttggtggcttcagcatcccatacggcactgggtatgctttaatcatctctgcctttggtcatgtctgtgtttgcttggttggttggtgtggttattagggataacaaatggatcttggcatagattatactacacagatatagggatcgggacacccgccgtgaagtactatgtacaggtggacaccggtagtgaggcattttgggttaacagcatctcctgcaagcaatgccctctcacgagagcgacatattggtaggtttccttctagtgtttctttagtttcagtccattaatctgcttgcaaaatctgctttgcaaaattgctttgtaatatgtttttgtttttgtcatgggtatgtgtatctgcttgtgtgcagagaaagctgacattttatgaccccaggagctcagtaagttcaaaagaggtgaaatgtgatgatacaatatgcacttcgcgaccaccatgcaacatgaccttacgttgtccgtacatcgcggcgtactctgatggtggcttaacaatgggcatccttttcactgatcttctgcactatcatcaactgtatgggaatgggcagactcagccaaccagcaccagtgtcacatttgggtgagttattaaagaaatagcactgctacacgtactaagtttttcttactaaatttttactgacaatcatcacaaccgtttgatttagctaaatggaagttataaaaaatctagatgcactcatagcatgacacatcaatgtattacaaccattttcgtacatgaaatttattgatttacaacagaagtgctcgattgtaaaatgccattgataagcaatagttcaacaatatgttttccatacgtgcaatactctttcatttttaccatcacatcatggttaacatcaaattatgtctctagtttttataaaatgaccaaaatatcattgagaacatagttatacccttgacagacttcttttgttttttacacagtgaccaaaacacctttgataactctgttacaccctcgacagactttcgtgagtgcctgttgctgtttatggtgaaatgaactttccattagaggacaacataggccccttaatggttagttcacagcgatggagaaaaggtagaaaaataacatgtatggtggcataacatataactcatatttataagatcgaaacacaataaccaaacctaccagagagtggtgaatggtacatacaccaaaaaccaaaatggaataaaaataatcctctaaccttacagagtccacgatgaagtctagttgactaacttgtgtgcaccggtctgaccactctagtcctgtcggtctgaccggtgtagagtcaccggtccaatcgccttgcttctcccttcgcctgacactgccggtccaaccatctaaaagttgcctgtgtcaccgctgtggcgccgccagtcagaccgcaaggatgctactagtctaactaccgaaacaaagaaaaacacaaatcaaacaattttttagaagtaaatcaactttattgcttctaattgtgctcacaaagtgtaacagtaacactcatctatcaactttcgactatactcaaaatttaggctaaacccttttttttttcaaaactgttatctcacaaaatggtaccaagaggcctcaacccctcttttttttataccttgaagtggctgcacaaagccacgaattcaacatggataagtaattctaatctcatagaaaacctacccgaacaagtatacaacttatccctttacaaatcaaactccaatcttttcaaatttggactccttccaaatttgactcatatttgttgatggcatttcatagagtcgagtggttgcatgttgatggcattttatagagtcgagcactttcatattgatggcacttacaatattccttttcatacaaaagacatttcattgcactagtacacagtaggcaaacactgccggtctaacggttactatagactagcagtgattaactatatataatgccggttcatgctggcttggatattttttccctaccaacccatgtgtatgggctatgatagacctagcatcactgtcggttcatcaaccggtagtggtaggtgaggccaccactgctggatgacctcttctagttcaaaaactgatagtgatgcatcaactacgaaccgatggtgattggagtttctgtagttgtattgtcttattaaatctgaagcattattttacagcatcacatggcaataattaaaccatacatatattttctgttcactattgtctgtaaggtgggtatgctgtattgattgtcttttattgtagatattcttttcaagaagtcgtactatataagtttgcccacttaggccctgcttgaaattgattattgactgtatttttttatggattatctactttgattatagggatagactaaatattttgagaaatatattcaacagatagcttagaacaagtggaccaataagtatacatgcaatagaggaatgttcaattttagaggcgttgagcaaatccatggctataatccagagaaggagcagaagagacatggcataagttaatgctcctgtggggggctaccattggatgttgcaccacacaacacactagttctttttcatatgaatggtcctgtggggggctaccattggatgttgcatcacacaacacactagttctttttcaaatgaatggtattttattgcactagcacacatgagctaatcactatcacccatcactacgggttgccatgcatagttccaacaattattgactattaatgccatttcatgccagccgggttgggcatttaccaaatctatatgaattcactatgatagcctgagcatcgctgtcggttcagccaccggtattgatagccgagatcactagtgtcggctggcctctgctggtttagaaattggcgttgatgccggttatgggttttgtgtaaatatatttattttcttttcatgtaaatctctgatgaactcatcacatgacaataattggttatggcggtcataggtatattttgatattttttatgccttgttctccataaggtgggtaggctgtattaattgtgttttatcgtagctgtgctatctaagaatgtgtactatataagttggcccactaaggccatgtttgaaacaaattattactagattatttttgtggattgtctacttgagaaacaatcttaacaaatggcttggaaagtaatctatcctatgcagtagaagaatattttttagcaaacatatttttagggacgtggggcaaatccgtgataataattcgacgaaatggctcccctgtgcttctaggtgtggtttaacaacaaactggaagcttaaacaattcagaactagcgattgatggaattattggttttggcaattcaaatcagacattgctatcacaattggctgcagcagggaagacaaagaaaatattttctcattgccttgattccacaaatggtggtggaatttttgctataggagaagtggtggagccaaaagtaaaaacaacacctatagtaaagaataagtgagttaaccatgtacttctctgctattaattattatgtttcttttatggtcacaatttaatttggatctactttaaatacatataattttaccctggttatagcttcttctggtatacttgtttaagaagcatttatcaaccccctaaaatatgatgcatttatccacttaaacatgaactgtgtcaagtggtacatctctggtacaaacattgtgaaaaaaaattatgtgttattgttcttgagtgttctttttaggcgcaatgtttcaaagttttgaatgcacagagctatgtgaaaatttatgttggctgtcttcaacatggactgaagggtgctgttaggctggaatcgctagaaccttaaactataattttaaaaaaaacctatttatatactttagtacatgatcttggctctccaccagtccctgttggatgttgggtttatgacaagtagggatatatgcatataatatcaatttgtattgtagtgcacgtatgccttcttacatgttgtaaccttttgagaatacatgtctttctgcgtgtaacccaggctcgtgattccaacacaaagatcataaccaaccttgtttggttctattgttgtttccaccaaactaatgctatagtatccattttgaatctgtataataatcactagacccaaagcatggatttacaaatttgtgggaatatgtatagtttttat</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0331600, RefSeq:Os04g0331600