Os04g0338100

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Revision as of 11:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0338100| Description = Similar to IN2-2 protein| Version = NM_001059030.1 GI:115457789 GeneID:4335513| Length = 3735 bp| Definition = Oryz...")
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Gene Name

Os04g0338100

Description

Similar to IN2-2 protein

Version

NM_001059030.1 GI:115457789 GeneID:4335513

Length

3735 bp

Definition

Oryza sativa Japonica Group Os04g0338100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:15945342..15949076

Sequence Coding Region

15945343..15945435,15945882..15945956,15947941..15948111

Expression

GEO Profiles:Os04g0338100

Genome Context

<gbrowseImage1> name=NC_008397:15945342..15949076 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:15945342..15949076 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcaccaccggaatcgcgcgcgcggcggagagaaattaatcgatcgatcgatcgatccgattccggccggccatggcagctgctgctccggcgacggcggctcggcgtcgattgcgtagacctttactaccagcaccgtgtcgacaagaaggtgcccatcgaggtcacgattggtgaactcaagaaactagttgaagaaggaaagataaaatatattggtctatcggaagcatctgcatcaacaatcagaagggctcatgctgtacaccctatcactgcagttcagctcgagtggtcattatggtctagagacgtggaagaagatataattccaaattag</cdnaseq>

Protein Sequence

<aaseq>SPPESRARRREINRSIDRSDSGRPWQLLLRRRRLGVDCVDLYYQ HRVDKKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWS RDVEEDIIPN</aaseq>

Gene Sequence

<dnaseqindica>2..94#541..615#2600..2770#atcaccaccggaatcgcgcgcgcggcggagagaaattaatcgatcgatcgatcgatccgattccggccggccatggcagctgctgctccggcgacggcggcggtgcggcgcatgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggctgcatgggcatgtccgccttctacgggccacccaagccggaggccgacatggttgcgctcatccaccacgccgtcgccgccggcgtcacccacctcgacacctccgacatgtacggcccccacaccaacgagctcctcctcggcaaggtcagttataataagtttcttcgtgcacgcttcggttgtttttttgggtactgggatacgcgctgaaggtgctcgacggaatgctcatgtgcgccaatatgcatgcaggctctgcagggcggcgtgagggagaaggtggaggtggccacgaagttcgccgtctcgttcgccgacgggaaggtggagatccgcggcgacccggcgtacgtgcgggcggcgtgcgagggcagcctccggcggctcggcgtcgattgcgtagacctttactaccagcaccgtgtcgacaagaaggtgcccatcgaggtcacggtgagtgcccccccttccctctctcctgtctttcagttcctttctgcttttttttttactttttttctttttactactttctccgtcacagaaaaaatatcacttatatggcctaaattaaataagggctgtttgtgaacaaggttataagggtaaaaaacaattgaatgattggtgactaataagataaatataatattataaaattgttacttattttgaatagattttaaatggaaagtggtttgattttttttacggaggaaatatctttttttttttggatgaaaggcatacatgtgtaagtgacggctgatgaatccgaaagggaaagtaggtagtgatgtgttgatttgtcaatgggttggtgtcaagattatacataaccagatgcgtggtagtggggaaagtttgcatgataatgatagaaataaggtttgtaaataagatgtaagatgggtttgttttttagctggactgaatatttgatcgatcatgttaaaaaagttataaataattcagatgatatggtttgtgataatttaaatcttatataaattgaccatttaaagtaaaactaaagttacgtaacttcatgagagaagaaaaacaagggaaataatatagatggatcatccaaagacaaaactgcggtgttgtggattcatcggagaagaaaaaagaggaagacgatttcgcctatagattaatcatccgtgggttataaaaatttgaggtgatgtggtatatactccctccgttccaaaatataactgtgtgtccagattcatagccaaaagttgttacattttagaacggaggtagtagtattattgggacaactgccagaaaaatggacatctttctatcaatgaaaaaaaaggcatttagtttgttttctagatctcgtagataattaatttcatattcattagtaaaactagaatggagagaggattaggaagttactgaaaaaaaatgtaagagagaattttgatcaaaggaaaacttgaacccggcttgaagcacacttaaattcttaagtttgtttagctgattatattatacatttgacatcctttctttcgttcgcagcaacttggtctcttaattctgaaaggataagttattaggttttgttgtaatagcaacatgaagcataaatttctttttcttttttctcgagaagaatttggaaccatacatttgtaaagatatgaaccatacatttgtaaagatatgtagcacaaaattatttgcattaagatctggactgtgtgccataaatcataattgcgtggaaaaccttacatgaatatctttcactgtcgatgacatgtgactggacggttacattactccatatttggtctcgatggttttctataattgataaatgttttattttcatttatatagtacatttatcttagatacagaggagggcttgttttattagacaatagctgtgggattttgaaggtgaagacgtaaagacaagactgagccaataattaattttcaccgacatgcatgtctcactcggcagttgcaacatacaatgctgttcttgtattagctgagatgttaaccacaaaccaaaccaacatttcaaagtttaacaattttaagatccaatgcagcaatacataaccaaaataaatagatatgagaggactgaaattggtgcaaatatctttgccgaagaggacttgttttcttgcagaaaatgtgagaatccaaaataggacctacagaacgtctaactacaaactatcaatacgagcacatgaactactgtgtttctgaaagcggatactagcacctgaactactattacttatgatatttccaaaccgttggatggaattattgtgtacaaataaagtgtactacctttcattgtatttttgtctgccttttaagtaatgacctttatttcttcccaatattatctagttgatgtttaccttttcattattagattggtgaactcaagaaactagttgaagaaggaaagataaaatatattggtctatcggaagcatctgcatcaacaatcagaagggctcatgctgtacaccctatcactgcagttcagctcgagtggtcattatggtctagagacgtggaagaagatataattccaaattagtttatccattgaaaaaaatcacatgccccattttaactatttttcttatttccatttcagagaacttggaattggaatagtagcttacagcccacttggtagagggttcttttctggtggagctaaactagtggagtctatctgttcaggatgttcgcaaggtaaattcttatggatactactcattcagttttccctaagaatggggatgaaggaggtaatgaaaataggtatcatgcctcttattttgaaacattgtaatttaattatattccttatatatagtttgaatattgggagtttccactaaataccttcgtgtgtactctcattttccaaactttgtgatgtatattaacgcctcgtctatttatttatacttttgcagcatcttcctagatttcaaccagcgaatctcgagaagaatgctgaaatatttgagcgtgttaacgcaatggcagccagaaaaggatgcacaccgtcacaactcgcattggcctgggtccatcatcagggaagcgacgtatgccccatacctgggacaacaaaaatcgagaatttcaatcaaaatgtagcagctctatctgtgaagctcacccctggggaaatgactgaacttgagtcctatgccagcacagatgttgttcaaggtgaccgctatgctcagacggccggcacttggaaggattctgagacccctccattgtcgtcttggaaagcagagtaaacgttttcatatgttcaaatacaaaatcccggttcaaatttagctcaaatggcagagcacacaccagattttgtataagtgttcattgtatcagacgcgttgctcgctcttgttaaaccatcgcttatgcttgtttgtgtctaaaacctagctagtggtgttgtaaagtgtggttttattagtttgtgcgcagtacgtgtgcgaataataaataaagttctgaggtcacatttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0338100, RefSeq:Os04g0338100