Os04g0339400

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Revision as of 11:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0339400| Description = Aldo/keto reductase family protein| Version = NM_001059032.1 GI:115457793 GeneID:4335515| Length = 3646 bp| Definit...")
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Gene Name

Os04g0339400

Description

Aldo/keto reductase family protein

Version

NM_001059032.1 GI:115457793 GeneID:4335515

Length

3646 bp

Definition

Oryza sativa Japonica Group Os04g0339400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16022472..16026117

Sequence Coding Region

16022523..16022969,16024838..16025010,16025386..16025488,16025657..16026001

Expression

GEO Profiles:Os04g0339400

Genome Context

<gbrowseImage1> name=NC_008397:16022472..16026117 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16022472..16026117 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcagcagcagcgacagctccggcggcagcggtggtgcggcgaatgaagctggggtcgcaggggatggaggtgtcggcgcaggggctgggctgcatgggcatgtcggcggtgtacggggagcggaagccggaggccgacatggtggcgctcgtccgccacgccgtcgccgcgggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgaggtgctcgtcggcaaggcggtggcggcggcggcggcgacggaggaggaggtgcaggtgcaggtggccaccaagttcggcatcacgccggcgtgggaggtgcgcggcgacccggcgtacgtgcgggcggcgtgcgagggcagcctccggcggctcggcgtcggctgcatcgacctctactaccagcatcgaatcgactccacggtgcccgttgagatcacgatgggtgagctgaagaagctggttgaagaaggcaagatcaaatacattggattatctgaggcctctgcgtcgacgataaggagggctcacgtggttcatccgatcaccgcagttcagatcgagtggtcactgtggtcaagggatgtcgaagaagacattgttccaacttgcagagaacttggcattggaattgtggcgtacagcccgctagggagagggttcttctccagtggagctaaactggtcgatgaacttcctgacgacgatttccgcaagagcctacctagattccagccagagaacctcgagaagaacgcggcgatattcgagaaggttaatgccatggcagcgagaaagggatgcacatcgtcgcagctcgcactggcctgggttcatcaccaagggagcgatgtctgtcccataccaggaaccacaaagatccacaacttcgaccagaatgtgggagcactgtcagtgaagctcacacctgacgagatgtctgaacttgagtcgtatgcttcagctgacgttgtgcaaggtgacaggtatcatggtacttttctgaacacctggaagaactctgaaactcctccgctgtcatcgtggagatcaggcaattaa</cdnaseq>

Protein Sequence

<aaseq>MAAAAATAPAAAVVRRMKLGSQGMEVSAQGLGCMGMSAVYGERK PEADMVALVRHAVAAGVTFLDTSDVYGPHTNEVLVGKAVAAAAATEEEVQVQVATKFG ITPAWEVRGDPAYVRAACEGSLRRLGVGCIDLYYQHRIDSTVPVEITMGELKKLVEEG KIKYIGLSEASASTIRRAHVVHPITAVQIEWSLWSRDVEEDIVPTCRELGIGIVAYSP LGRGFFSSGAKLVDELPDDDFRKSLPRFQPENLEKNAAIFEKVNAMAARKGCTSSQLA LAWVHHQGSDVCPIPGTTKIHNFDQNVGALSVKLTPDEMSELESYASADVVQGDRYHG TFLNTWKNSETPPLSSWRSGN</aaseq>

Gene Sequence

<dnaseqindica>52..498#2367..2539#2915..3017#3186..3530#gtctcacttcaccagccgctcaatcctctcccaagaatcgatcggccggccatggcggcagcagcagcgacagctccggcggcagcggtggtgcggcgaatgaagctggggtcgcaggggatggaggtgtcggcgcaggggctgggctgcatgggcatgtcggcggtgtacggggagcggaagccggaggccgacatggtggcgctcgtccgccacgccgtcgccgcgggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgaggtgctcgtcggcaaggcggtggcggcggcggcggcgacggaggaggaggtgcaggtgcaggtggccaccaagttcggcatcacgccggcgtgggaggtgcgcggcgacccggcgtacgtgcgggcggcgtgcgagggcagcctccggcggctcggcgtcggctgcatcgacctctactaccagcatcgaatcgactccacggtgcccgttgagatcacggtgagagcagctgatcacgagatcctagatcctatgtattgtattgtagagggtaggatttaaacatatactttactaaggttgtgtttagtttacgcttaaattggaaatttggttgaaattagaacggtgtaaggtcatgtttagtttctaaaacaaaaactttttacccatcacatcgaatgtttggacacatgcataaagtattaaatgtggataaaaaaaccaaatatacagtttgtgtgtaaattgcgggacaaaacttttaagcctaattatgccatgatttgataatgtggtgctacagtaaacatttgctaatgacgaattaattaggcttaaaaaatttgtctcgcagttttctaacggaatcggtaatttgttttgttattagacgatgtttaatactttaaatgtgtttccgtatatccgatgtgacacccgaaaacaaaaaagaaatttgccatctaaaccgggcctaagcggattgttggtgtggattatttatttgattaattatatgcataataagttacatgtcttactaaaaataaacttaacaaattaataaaaacaagtgatctaagcaatgttattgaaagctttttgcgaaaatgtacttttctcaaagaatagaacaaataacttttcatataataatccagtgaatattctgaaaaaaatataggcacttagcaacacaattttaactatttccttttgtcatacagaaattctagtcaggatacagttttcaattatacagtcatcatgtgatgtggacacatggaaatgatggaataacgcttcttttaattaaaaaataaattatatcatgatatatactggattattactgaccaaattaagttaatattttaaaaatagataaatatatagatcttactcatgtttgtcttgaaaagtcacacactctttatctttttgagtaaattaattgatgaagaactgaccagaatgcggagagatcttctgattacgttggcacgtagcacacgcattttaatttactgttattgctttgaatttatatagatagtcatatgatgcggagacgtacgtacgccaaggtgatggtagaacgctgtgtttttaataataaataaatcatatcatgatagttgctgactaaatagctcatggagaaatggaaagatattaattttgaccgaagttaataaataaaatatagatattataggccgcaaataaaataaaattttaaaaccttagttttaaaccgtctgctcctttttatttatcgttttatactttttttaccttggattttaaactactaagagaatcataccctattactattttcggaaattcccacaatttcagagagcacccgagactatataatacctgcttgtattgaaggagaatggatgacatgtccatggatgtgtttctaaactgcagtctatggatgtgtttcgaatcagtccaagattatggaataggttaattttgtcaatagtctatgtttaatacttctaattagtgtccatgtgacggggacttacaaacttttagtcccatccaacacccccccccccaaacgtttgcttggccatagaattgaaagttcattactgaaaaaacggccagtaagtatttttagcaaaaccgtttattaatagatatggatagaaagattgtactcctgttggtgttgagaagtcacacactctttatctttttgactcaactgaagagctgacccgatgggaaaaattcaacaaaaataaaccgtactttccataccaattccaacttcgaagataagtattaattcagcactcaccaagcctacatttctgacttttatatacatgcagatgggtgagctgaagaagctggttgaagaaggcaagatcaaatacattggattatctgaggcctctgcgtcgacgataaggagggctcacgtggttcatccgatcaccgcagttcagatcgagtggtcactgtggtcaagggatgtcgaagaagacattgttccaacttgcaggtaaatatattatatatgtaagaatcatggagcagtactactactactattattattttctagaaaaccgggaatatttcggtctgcagggattgcaatttcgatctgaaattttggaaattttgcccctctctagcacgcaaatatctagcccgaaattcttggcatttttcttttttttatttagttaaaaattattcaaattcaatcaaaatttgttaaattttttcaaataatttcgtgccaaaaagttcggaaattcccacaatttcagagagcaccccacaccatataatacctgcttgtattgaagcagaacatgtctatggatgtgtttctaaactgcattatttcttcttgttccgaaaatttcagagaacttggcattggaattgtggcgtacagcccgctagggagagggttcttctccagtggagctaaactggtcgatgaacttcctgacgacgatttccgcaaggtgattatactgcccatgagatcaaccacgacagccatcaacaattaattacgatctaaataaaatcttaaatatcgattctttgtttgtccaatcaatacatagatcgacattgatccgtgcctgtttttcacaaatataatatgcattttccactcttctcttcagagcctacctagattccagccagagaacctcgagaagaacgcggcgatattcgagaaggttaatgccatggcagcgagaaagggatgcacatcgtcgcagctcgcactggcctgggttcatcaccaagggagcgatgtctgtcccataccaggaaccacaaagatccacaacttcgaccagaatgtgggagcactgtcagtgaagctcacacctgacgagatgtctgaacttgagtcgtatgcttcagctgacgttgtgcaaggtgacaggtatcatggtacttttctgaacacctggaagaactctgaaactcctccgctgtcatcgtggagatcaggcaattaattagtcagagagattgtcatctgctgggagtttgatggagttttattgtcacaaatatagatagcttggtgtatcaatcacatgtttattatgcaaataaaagtttgtatggattg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0339400, RefSeq:Os04g0339400