Os04g0347200

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Revision as of 11:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0347200| Description = Similar to Basic endochitinase precursor (EC 3.2.1.14)| Version = NM_001186954.1 GI:297723038 GeneID:9271757| Length...")
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Gene Name

Os04g0347200

Description

Similar to Basic endochitinase precursor (EC 3.2.1.14)

Version

NM_001186954.1 GI:297723038 GeneID:9271757

Length

1622 bp

Definition

Oryza sativa Japonica Group Os04g0347200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16540807..16542428

Sequence Coding Region

16541842..16542354

Expression

GEO Profiles:Os04g0347200

Genome Context

<gbrowseImage1> name=NC_008397:16540807..16542428 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16540807..16542428 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgctgtggcggctggcgctggcggcggcgatgtgcggcgcgctgatcctgtcgtcgtcgtcgtcggcggcggcggccgggaagaagaccgggcggatcacggtgtactgggggcagacggcggcggaggggcggctccgggaggcgtgcggcagcgggctgtacacgacggtgatcgtctccttcctcaccggcttcggcggcggccggtacaagctggacctcgccggccacgaccggggcgccgtggggcccgacgtgaagtactgccagtccaggggggtgctcgtcctcctctccatcggcggcggcatcggcaggtactccctcgcctccaaggccgacgccaaggccgtcgccgaccacctctgggacttttaccttggcggccgctccaagtcccgccccttcggcgacgccgtgctcgacggcatcgacttcgacatcgagctcggccgccccgcccactacgacgacctcgccaggtacctaaggctacggttttaa</cdnaseq>

Protein Sequence

<aaseq>MASLWRLALAAAMCGALILSSSSSAAAAGKKTGRITVYWGQTAA EGRLREACGSGLYTTVIVSFLTGFGGGRYKLDLAGHDRGAVGPDVKYCQSRGVLVLLS IGGGIGRYSLASKADAKAVADHLWDFYLGGRSKSRPFGDAVLDGIDFDIELGRPAHYD DLARYLRLRF</aaseq>

Gene Sequence

<dnaseqindica>75..587#accatgcaaagctcacacacttcagctcgagatcgagctaagctagcaggcaaaggcattagcgattaattagcatggcgtcgctgtggcggctggcgctggcggcggcgatgtgcggcgcgctgatcctgtcgtcgtcgtcgtcggcggcggcggccgggaagaagaccgggcggatcacggtgtactgggggcagacggcggcggaggggcggctccgggaggcgtgcggcagcgggctgtacacgacggtgatcgtctccttcctcaccggcttcggcggcggccggtacaagctggacctcgccggccacgaccggggcgccgtggggcccgacgtgaagtactgccagtccaggggggtgctcgtcctcctctccatcggcggcggcatcggcaggtactccctcgcctccaaggccgacgccaaggccgtcgccgaccacctctgggacttttaccttggcggccgctccaagtcccgccccttcggcgacgccgtgctcgacggcatcgacttcgacatcgagctcggccgccccgcccactacgacgacctcgccaggtacctaaggctacggttttaaatattcttctgtagctgtttgagatttgagaaaagtctagctatttgctcttacgtactttttccgttttatattataagttgttttgattttttttcaaacttctttacgtttaacctaatttatatagaataaattgatttaattaaatgtaacattaaatatattttaaagatatgtttgttttgtgttgaaaatactgctatattcttctataactggatcaaacttaaaataatttgattagaaaaaaaatcaaatcgacttataatatgaaatggatcgaggaagtataaaatttaactgctatagcatctcatttaacccgatgttacctgttttgagactgtctaccgctagatgtcttagcccgctatttaaaaaactgtaggtacctcaaagcttacagcgggaggaagccagggggtaagaaggtgtggctgacggcggcgccgcagtgcccgttcccggacaggatgctgggcgaggcgctgcgcacgggggtgttcgaccgcgtccacgtccagttctacaacaacccggcctgcagctaccgcgccagcaacgccgccgcgttcgccgcggcgtggaggaagtgggcgtccagcctgccgaggagctccgtctacctcgggctcccggcggcgccgggcgcggcgaacagcgggtacgtcccgccggcggcgctggcgggggaggcgctgccgatcgtgcagcggtcgaggaactacggcggcgtgatgctgtggagcaggtactgggaccggcgcaccggctacagcaagaagataaagcatgccgtgtgattgtactactatgtgtgcttaatattggaataagggtggccttgcagtagttcttactgctgacaaaatggccctgcgatcacaccttatgtgactgtataattagtgtgtgtttggggaagaagagcatatggatgctagcttccaagtatattgtgtatgtgtatgtccaataataatattgtgtaataaaataaaatggcaagtcgtccttgtcaggaagaagatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0347200, RefSeq:Os04g0347200