Os04g0348100

From RiceWiki
Revision as of 11:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0348100| Description = Conserved hypothetical protein| Version = NM_001059055.1 GI:115457839 GeneID:4335541| Length = 3314 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0348100

Description

Conserved hypothetical protein

Version

NM_001059055.1 GI:115457839 GeneID:4335541

Length

3314 bp

Definition

Oryza sativa Japonica Group Os04g0348100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16588698..16592011

Sequence Coding Region

16588817..16588943,16589037..16589150,16590438..16590487,16591107..16591179,16591357..16591552
,16591628..16591919

Expression

GEO Profiles:Os04g0348100

Genome Context

<gbrowseImage1> name=NC_008397:16588698..16592011 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16588698..16592011 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgccggcggagccccggccgcccgccgccgccacccgcaagcggaagaagccgcacaaacccaccaaaaccctcgccaagaaccccaccaatcccgtctccacgaaggcgaagaagaagaaaccgccgccgccctccaaggcggaccaatccgcctccgccgccgccgccggtggcgtcctcctgtcggccgagatgccccctgcgcggcagctcgagttcctcctccgcagcttcgagcgcgccgccaagatgcgcctctccccgctcgagctcgacgcctactccgagggatgcatggtgccgctcgcggagggggcgagccaggacgtggagggattcggtgaccatgtgaaaggggcctttggctcctcttggaaggaggagctttgtgagggggagctcgatggcggcgccgtggacgcgggcagcccggcgctcctggttatctgctcagctgctctgagatcgttggagcttcttaggggtttaaagatgtttactaaagagtgccgccctattaagctctttgctaagcacatgaaagtggaggagcaggttgcgttgcttaaaactcgagttaatattgcttgcggtacaccaagcaggatcaagaagctaattgacatggaagcattatctctgtcacgggtgaaactagttgtacttgacatgcagagagatgcaaagtcatttaccttattcacgttgccacaagtcagcaacgagttctgggacttatacaagggctatctcgatcagaaagttcgaggaggagatacaagattatgtttttatggtgctgtctctgagaaagatgtgaaaaaagcccttccatctgcggagtaa</cdnaseq>

Protein Sequence

<aaseq>MSPAEPRPPAAATRKRKKPHKPTKTLAKNPTNPVSTKAKKKKPP PPSKADQSASAAAAGGVLLSAEMPPARQLEFLLRSFERAAKMRLSPLELDAYSEGCMV PLAEGASQDVEGFGDHVKGAFGSSWKEELCEGELDGGAVDAGSPALLVICSAALRSLE LLRGLKMFTKECRPIKLFAKHMKVEEQVALLKTRVNIACGTPSRIKKLIDMEALSLSR VKLVVLDMQRDAKSFTLFTLPQVSNEFWDLYKGYLDQKVRGGDTRLCFYGAVSEKDVK KALPSAE</aaseq>

Gene Sequence

<dnaseqindica>3069..3195#2862..2975#1525..1574#833..905#460..655#93..384#gggaattttccttaacgagagcagcgagcaggggctgggcctaaaaccctaacaacagaaccgccgccgccacggaacccacccacgccggaatgtcgccggcggagccccggccgcccgccgccgccacccgcaagcggaagaagccgcacaaacccaccaaaaccctcgccaagaaccccaccaatcccgtctccacgaaggcgaagaagaagaaaccgccgccgccctccaaggcggaccaatccgcctccgccgccgccgccggtggcgtcctcctgtcggccgagatgccccctgcgcggcagctcgagttcctcctccgcagcttcgagcgcgccgccaagatgcgcctctccccgctcgagctcgacgcctactccggtaaaccctacccacaccagagtccagagatgcttcttggcgccatgaatgattaccagctttgttgatttgcagagggatgcatggtgccgctcgcggagggggcgagccaggacgtggagggattcggtgaccatgtgaaaggggcctttggctcctcttggaaggaggagctttgtgagggggagctcgatggcggcgccgtggacgcgggcagcccggcgctcctggttatctgctcagctgctctgagatcgttggagcttcttaggtagtagaaacttgttgcgaatggttcacatcgttttgtgttgtgtccttatgtcgagtccgtagagaattgacaggatatgatgttgcgtctatctcgatatcgccaaattattctgatttgttctaaataattgatcatgttctgttgacacgatagttggtgtgtactttgcaggggtttaaagatgtttactaaagagtgccgccctattaagctctttgctaagcacatgaaagtggaggagcaggtttgtattgtctcagttggaaattttgggtggcattaggttactgcattttgtttagtcataccaaaaccaaaggttgcagttcatccactctctaccatgactgaaatgataatgctgctgccttatgacctagccctacaacactgttgtttggaatgctcacttacagtgtagcttctgcagttttaatggaagtataaaagtgatcatgcttctgcagtgtaacatagtgactaattttgggaactctatgttgatataaggatatactccatacaacattttctcacctcttttttctagttgagtactgatcatgcatcactatgttaggaagagaagaaaattaagtcatagcccatgttgtgttgaaatgataaggtttcttgtattgattttgcacttcattatttttttcttgatttgatatttgttactttttagtataattgtgtgctttggtcatgtaatagttctgctgaattgcagacgacaatgttgtattgtgtaaattcagttgttctttgcttttagcctccagcttcctagtgtttttttcaagggaaccgcttcctagtgtttttgtttctaccttaattccaatttttctttgcaggttgcgttgcttaaaactcgagttaatattgcttgcggtacaccaagcaggtatgtgatattgcctgttcatgcatccacccgtctcatattcctattatgtttgatgagcatacaatggggccttaataaatcgctgattcaagaccaattttgcattaaattatagtctgaagtattagtaagtgtttttttatgtatcctattcacaacataaaggatataaactaaccaaattttcctatgttgcacctgtaatatttttattcttctgaaagcagcttctgaataagctaatatgttcaagaaaaatcacgatatgttgaaaataaatgattagctcttattacttatagctatattccatggatttttttttagcatatcagtgtacgctaaatcactaattagagaagaatgaatgatgaagctttgttaacagtcatgtcaagcagataacagttcaagcaaatttgtttagcttttctctgccatccaacagaaataataaaaagcggattgataaagttacatattcagatcatcaagccgaaatttgaatactattatccatctatctccctgcctgcattctcctttgcacaggagtgtttcgctaatctctttcgtgtgacaacacgataccataggcatattggcatattatggttgtgaggaaatgtgatatctcacttttatgagtaaatttctattgtgaaataagggtggctcttggaaattttatctttatctttgtcatgttttgttcaacagaagagaaattttcagttactttcaactccatagccaggctaggtcattcatgtcttcttagagacagtaccactgaaggggctttacagctttactatgactgcaacaaaagaaaaccctagaaagattagatgacagttctaacttggtcatttatacccttcattttgtttggagctttctgcatgtcattggaaccacatcaaaatgtcaactatgccatcattatatgctaactttttcagcattttacttgagaaaacatgaaacattagatcattgtttgaagtcgaaattttttatgattagattgtatctagaaacatttggtgttcatgtcttatggtaagcataaagtaaatgcttctgctagtgatgttaggaaagtgagctaattttagtgtgaagagcctaatggagaaaaatatatgttcaagacagtgcaaaaagtgatctggtttcttccttgtttgttaaatatcagcaaaaatgacgtgcttcctgcagtagtactgcatgcttattctgttattaactttatctcacaatttttttcctgttcaggatcaagaagctaattgacatggaagcattatctctgtcacgggtgaaactagttgtacttgacatgcagagagatgcaaagtcatttaccttattcacgttgccacaagtcaggtagtatattgacaacaatattttaaccacaaaaagaaaaaaaaatgcacaaccattggcattgttctaattttttttggcatcaccatgcagcaacgagttctgggacttatacaagggctatctcgatcagaaagttcgaggaggagatacaagattatgtttttatggtgctgtctctgagaaagatgtgaaaaaagcccttccatctgcggagtaaaaatggctgatacgatgaatttgtgtcatgtgcacattgtagtcaatgtactagatatgtatttttgacatactagaagtttgtagaagcaggctgggcaagaaaattttggaattttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0348100, RefSeq:Os04g0348100