Os04g0349300

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Revision as of 11:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0349300| Description = Conserved hypothetical protein| Version = NM_001059060.2 GI:297602514 GeneID:4335546| Length = 5598 bp| Definition ...")
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Gene Name

Os04g0349300

Description

Conserved hypothetical protein

Version

NM_001059060.2 GI:297602514 GeneID:4335546

Length

5598 bp

Definition

Oryza sativa Japonica Group Os04g0349300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16658624..16664221

Sequence Coding Region

16662422..16662575,16663056..16663558

Expression

GEO Profiles:Os04g0349300

Genome Context

<gbrowseImage1> name=NC_008397:16658624..16664221 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16658624..16664221 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgccggtgggtgctcgcggcctcgcagaggtacggggtcgtgatcgacgcggcgacgagggaccatgtctgggtgctgctgcggctgtgcctcaaggcggcggcgtcggaggcgcgctgctccctggaggatgcgcgcggcgccgagggtggagggtctgggtttgttgacccaagggccatacggtttgagtgcccgaggcttgtcgacgccgtctcgtggctagggacgcagctgaggatcctgtatggagagagtagcgggagatccttcgcgatcgcggcggtgagggaggctattctgcgtgcggggtcttgtttggccgtcggtgttgacggcggtggaggttcaggtgtagaaggaagtgattttggaaatgttgggacgccctctgtgtctgttgctcaagttgctgctgccattgcggcgttgcatgagaggttctccttggaggagaagatcaaggcacttcgagcgccacgtccggccaaatttcagcttttactggaatattcaaaagcactggaacgaggccgcgaggagcgatcaaaacgaccaaactacagagctgttctggagtatgatggtattatatcacgccgagtagatagccaggtaaaggcatgcaaccactctgtcagtagtaggttttaa</cdnaseq>

Protein Sequence

<aaseq>MRRWVLAASQRYGVVIDAATRDHVWVLLRLCLKAAASEARCSLE DARGAEGGGSGFVDPRAIRFECPRLVDAVSWLGTQLRILYGESSGRSFAIAAVREAIL RAGSCLAVGVDGGGGSGVEGSDFGNVGTPSVSVAQVAAAIAALHERFSLEEKIKALRA PRPAKFQLLLEYSKALERGREERSKRPNYRAVLEYDGIISRRVDSQVKACNHSVSSRF </aaseq>

Gene Sequence

<dnaseqindica>1647..1800#664..1166#atcgactagcgggtacccacgaccccacgacccgccggcaggccgcggcaatcccccttccccgccgccggcgccggaaacccctcccctcccatggatccaccaccactttcggctgatgcggcacccttcgccggcttcggccttgcccaccttcgcttcctcctgtccgacgcctcctccggcctctctcacctcccctcctaacttcatgccccccacccgccaccatcccctccaccatcctccccgcggccgcctccacctccctccccttgcctcccgcccgcccctcgcctctcctgtccggctcctgctccgccgcccaccatccccatctctctccctcgcccgcctctccgctactccgactgccccgccgtcgtccgctccaccaccaccaccccgtctccccccgcttcctcctccctccccgccttcctcgccgcccactgcgccgattactccccctccccctccgccccgtcctctcccccgcgcggcctcctcctcctcctcccgtcggagctctgcctccttcgccgggagttggactcctggggcgccgccgcccacggcgtgctgccggggtcctacacccacgccgcgtcacgtgcggtggcggcggcggagcgctctggcctcccgcggtgggaggccgagatgcgccggtgggtgctcgcggcctcgcagaggtacggggtcgtgatcgacgcggcgacgagggaccatgtctgggtgctgctgcggctgtgcctcaaggcggcggcgtcggaggcgcgctgctccctggaggatgcgcgcggcgccgagggtggagggtctgggtttgttgacccaagggccatacggtttgagtgcccgaggcttgtcgacgccgtctcgtggctagggacgcagctgaggatcctgtatggagagagtagcgggagatccttcgcgatcgcggcggtgagggaggctattctgcgtgcggggtcttgtttggccgtcggtgttgacggcggtggaggttcaggtgtagaaggaagtgattttggaaatgttgggacgccctctgtgtctgttgctcaagttgctgctgccattgcggcgttgcatgagaggttctccttggaggagaagatcaaggcacttcgagcgccacgtccggccaaatttcagctgtacgctttctcaaaacctactgtcctatttaatcaagcattgcttattgaattatatagttctatgctaccaagattgaagaatgctttggagatcttgacatcactagtttcagtccagcagactgtcggaaaaagctgcatattaaattcgacatctaacaatctattatttgatggtccaatggacatgatgtaataagctatatggaaattcgagggaaagaatctgggttagtaatcacaagttatctgtgtttcaaatatgttgctctgatatatatgaattcaagtacattggttttatgctacatgtaggctgcctgtcatgaatgcacataattaaaatagttattaataatatttaacagcctgatccctcacagtaatttgcattcccagcatatgattagttttgcacttctgcttggtttcacaaagcttttccttccatgaccccatatattcatttgttggtagtttactggaatattcaaaagcactggaacgaggccgcgaggagcgatcaaaacgaccaaactacagagctgttctggagtatgatggtattatatcacgccgagtagatagccaggtaaaggcatgcaaccactctgtcagtagtaggttttaatatctagatagtagataccatgctcatgctcaatgtttttatattttctagttgttccaggagttgtatgtacctattattgaacagctcttaagaaaaaaatattgactcatgaaacagttgcatttatagtttttatgatccttaatgatctgtagatactttatatttgaacatttgactaacatgctctgatctctttgctttgttatttactatctaaatgcacattttcttaaaaaaaaaattaagaacatagtgttgatcctcttgactttgttttctgtacaagatggtgctcataatatcattttagtgtatcttagctctctttattgccatcttgaaaaggaatttggtagagtcaagactagagaggagcttttagctgaagagcgagattacaagcgaagaagaacgtcgtaccgtggcaagaaagcgaagagaaatccaaaagaggttcgtttggatttgtttctcaaaaatatcatttgtctttatcatcctcaagttttctgatatatgaatcatttatgtatgtccaatggcccctaaatatagttctctatgggatcctgcttgcaaacgtttgaaatcttgggtattattataagtaaaagattgtgtgactgatcacaagaaaaacaaatccatcagatgtctttgaaaatatttcctagcatattattatttttatctgtgtgttactatcaaaaagccagtccaaatgttgtgttgtgaccatgataattcagatttacatggagggtctatgtaacttttcaggtggaacattactcaacactctcttttgttgatgacagctcactttctattagggttcgaagtcagggaacatcatctcaattgatttatttattcattttcaatctcaagttagttacgcttagatttcatatttaattattcttataccatctagattgttcaatgtgtcatatactcagatgacccttcagtgcatgttatgttacttatactcagttgattctgcaatatgtgatcgatatatggatttaattttttttccttctctgttgaagattttaagagacataattgatgagcatatggaagagatcaaacaggcaggagggattggttgccatttggatgtgcctggtgatattgcacagagtgtgcttaagaatagtcctcatgatggcacataccaaggaagttttaatcctacaagcagttcttatggtaaggacagttttggtattccatcagtcagttgtgaaaaattaccatgtgctaattcttttggaatagtttcatcaaggaaccatggcacgagggattcatataaggacttaagaaatggaagtcatcaacgccagtaccagaaagtatctgatcatgagaatagaagtattaaagattcagaaagcacagtagatcaaaggtattctcaccatcatgagaacagcggacaccaaagaaattctgatgatcataggaaatatggttataagtacaacaaaaatgggtcagactattattctgaatcaagcagttgtacaagatggtcctcagagagaatatgaccgcatgtcaagagtcagaagcaatgatgtaagtacaactagtcatacccggcatagatcagtgtctgtgactcaagataagttcagtgatagatctgatccccaaagcgcatattctgatgttgatcctgcaacaagcatgattgatgaggcgtctacggggcagcgtgagatataccatgatggggcacatcatagaagaaaacatgatcgccattactgaagaaaacaattgccctttttttggtcaggtatacttgctatcttacattttgagttctttttgatgttttgttcttatttttacactgctatttgacattatcttgcagtatactaatacaagcatcttggtatagccttcacctgtatccttttctgtatccttatgcagaaaatgctgttctatttctgcagctgtaccatacatctgtattatgctgttcttttcttcctatgcatatgttatattaatgcattccgacaaataatattcaaatttgctattcatatatttttttagtagtattgagctgaactatcttagttgtacatatctgaactttatgtagggtaacaaagttttctcaactttcattcaatgtaacattctttctagaattctgctcagtttatttatgagccgacaaagaaatcttagctgtgtacttctgtgttgcaagaattgaagaaatgcatatatttctgagctgtccaaatttatgttcatctggttaaaatatttctagatactaattgacaattgcatgaataattctcccgttcattctaatttgtggacacttagttacttcacaataatgggcttcctaatcctaatggagttcaagatttggtatgtctttgtgccactagaggcaaatttactttttgttgcttgacatttttaatgatgcatatactgtataggttttttgaaatggggatcttgcaccaatcgggtacctgaacataagaactgatacttctcttttatttttgtatctgtcaagatgaagctagtgacagcagtcaattaatcagcgtattggtcgagcatcgcttgtgtaggatgcattcttgggttgtatcggggttgtttccttgaccctttctttggacatttattcgctttcttcttaatgaaatgaaatgcagtcgtcctgcattttcgagaaaaaaataatcagcatagaaataatcaaattgaaggttttgatttgcaacagcttccacctggctattacttccatgtgttctctgcatgaattattaaaaatgatcaaaattaatctttgagagttatctttgcatgaattttgaattctcgaactacttaccatccattctaatctgttatatatcacagtacaaatatagggtaaaatacactagcagtcctgggtttcttgaacttcatatttacaatcaaaacttatggcactataactttatttgccttcatttatgagaaaaacaatgccgtgctagattggcatcgcctattggtctaacattcagtgtgacttttgcattttggttggaactgtctttatggagcttttatctgctatttctctagaactaagaatgagcagttgacacttgtgtttcattcaaattgcaaaatacatgatcgttttataaatattgattatttaaggaaacaaatgtagtttctttttactatcgttacatgtgttttcagagtattaaaaggttgtagaatgaccagaattgcttgctgtctatgatgggttcctgctagttattggtcacttgctttttcaatatgcatccagtttttccttcttacttcaaatacatcatttaatgacaaaactgttatctgatctattggcatccttaacatgttctctctttgtgcaggcaacagtgctgggcagtaaagctgcaaactcttagaaatagtttagctggattagtgtgatttgtattgtcattcgaatgtatgcgcgtggagttgatgttatgtaagcaggagcacaggttggactgtttggacatcacatgacattcgtaatcattactgctcatctcctgaagcctcagtttgactttgacctcattactgcacgtcgcaagatgcctgttgtagaaaggtaccaccaaaagtttccggtgcacttaaataccatccaaatttgtaaaccttcgtatatttaccactccacgtatggccatgagatctgtacaatccgtttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0349300, RefSeq:Os04g0349300