Os04g0349500

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Revision as of 11:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0349500| Description = Similar to 40S ribosomal protein S8| Version = NM_001059061.1 GI:115457851 GeneID:4335547| Length = 2653 bp| Defini...")
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Gene Name

Os04g0349500

Description

Similar to 40S ribosomal protein S8

Version

NM_001059061.1 GI:115457851 GeneID:4335547

Length

2653 bp

Definition

Oryza sativa Japonica Group Os04g0349500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16666703..16669355

Sequence Coding Region

16666961..16667039,16667247..16667422,16667939..16668272,16669039..16669111,16669255..16669258

Expression

GEO Profiles:Os04g0349500

Genome Context

<gbrowseImage1> name=NC_008397:16666703..16669355 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16666703..16669355 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtatctcgcgtgactccatgcacaagcgccgggccaccggtgggaagcagaaagcgtggaggaagaagcgaaagtatgagcttggtcgccagccggcaaacaccaagttgtcgagcaacaagacagtgaggagggtccgtgttcgtggaggaaatctgaagtggagggctcttcgcctggatactggtaactattcttggggaagtgaggctgtcactcgcaagacccgtatccttgatgtggtctacaatgcgtcaaacaatgagcttgtgaggacccagacccttgtgaagagtgccattgtgcaagttgatgctgccccattcaagcagtggtatctcactcactatggtgtcgatatcggtaggaagaagaaagctcctgctgctaagaaggatgctgctgagggacaagagggtgaggctgccacggaggaagcaaaaaagagcaaccatgttgtgaggaagcttgaaaagcgtcagcaaactcgcactctggactcgcacattgaagagcaatttggcagcggaaggctcttggcctgcatctcctcccggcctgggcaatgtggcagagctgatgggtacatcctggagggcaaagagcttgagttctacatgaagaagctccagaggaagaagggcaagggtgctgcagcttag</cdnaseq>

Protein Sequence

<aaseq>MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTV RRVRVRGGNLKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAI VQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKDAAEGQEGEAATEEAKKSNHVVRKLEK RQQTRTLDSHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKG AAA</aaseq>

Gene Sequence

<dnaseqindica>2317..2395#1934..2109#1084..1417#245..317#98..101#tcctcccccccgctagttcccaaccagcagctgcggcggcgcgagcacacgaagaggaggcggagcagccggagccacctccgccgccgccgccaccatgggtaaggcacgcccgcaacccgggtgctcaaccttcctcctccgcttacccccatccgcgtggggggttgtggagttcgttgtttgggttttttgcgtgtgtgtgtgctgatggattgatgggggtgcggtgatggctgtgcaggtatctcgcgtgactccatgcacaagcgccgggccaccggtgggaagcagaaagcgtggaggaagaagcgaaagtaatgccgatctcccactcttttttttattttcttgcgtgcgtttccattcggttcgagcgggcgttgttgttttggggattaggtgtgttggatgagtgcatgatttagattgtttctttggatggtttgttatgtttgcatatatgatggtatatacctagatctcttgcatggcgcagtgaaacttagattagaaagacaattgtgttctctcgataaatggttgggaaagatgatgctagtatgtcatttttccacaattttagttggttatagttatatgtgagaatgatgtgcttgcaaatggatgtggctgaaattcctagaacttgacacgcttgtccctgtttccccacaaattagttgtagatagttaaattatgaacgtgaaagaaattactccccactgaagatgtgattattgaattattgatgaatgagtcggtcactgtttagaatgcagaagtcacatagcgttgatgattgtcctcacctcatttacctaatgcaattatatggttaaatatgtgttgcagctgtgtgtgattctaagattgttttgtgattgttgtatgcacaagcttccattctgatgactttgttgtttctgtcaaaaacaatggaccaccactaggaagaatttgattgagccatgacaatgttaaatgctaaatgtaggctgtagctgtgataattgtgatgacttggttgcttgtgcttcttgttccagagtgtaatattgtcgttctggtttgttgttaaggtatgagcttggtcgccagccggcaaacaccaagttgtcgagcaacaagacagtgaggagggtccgtgttcgtggaggaaatctgaagtggagggctcttcgcctggatactggtaactattcttggggaagtgaggctgtcactcgcaagacccgtatccttgatgtggtctacaatgcgtcaaacaatgagcttgtgaggacccagacccttgtgaagagtgccattgtgcaagttgatgctgccccattcaagcagtggtatctcactcactatggtgtcgatatcggtaggaagaagaaagctcctgctgctaagaaggatgctgctgaggtattatttattgtggccaaatgttctgtacccttcactacacacttacttgattatctgtttgtcttggttgttttacataagcatcaaaaccgtctttttgttgttttgtttgagatgctctatgcggttctgctgtattgttttatctatgttcaaattagtgtaaaattttcctttgtctattgtcccattctctttttgttggctacttcttttgtgtattgatttgttgaatcatttaacctggtaccttattattttgtttatgtatgcaatattaaacattgggctattatttcttgatgcaagttgcactcagatttgaaagtatcgtctgatcatttcattgatagctatatagtgcagttttatgtttttatgcttgctttattttattcatatgtaaaattatgcgtttttattctcatgctgttttttgtccattactatgtaaaattgtagttgtaatggctcccttgtttgaaacaaaatgtccattttttgtgtatgtagggacaagagggtgaggctgccacggaggaagcaaaaaagagcaaccatgttgtgaggaagcttgaaaagcgtcagcaaactcgcactctggactcgcacattgaagagcaatttggcagcggaaggctcttggcctgcatctcctcccggcctgggcaatgtggcagagctgatgggtaaggactacaataggttcctgctttcctttctttgatgagttaataattttatttacatttggtttatatgctcagagtgttaggtgtcttattcttgggtttaaactagtcatgttgataatttccgttttaagcttttaacaaactttgaaatttcccacttaacaaggactatttaatcacattgaacgttttgaatgacaggtacatcctggagggcaaagagcttgagttctacatgaagaagctccagaggaagaagggcaagggtgctgcagcttagagcgttctctcgagtgtgttttacgctggaaggcccgcctattttattcagtggattttgttagtcatgtttgcgtctatgtcgtgcctacagaccctactgaacaccaattttctgaaagaatgatgaatcaactcttagcttggaagaactgattgtgagaattttcacatgctatggttgtattctcgtggtatttaggttccatgtgtactcagctacagcattctgttatgttttatgcccttccaaggtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0349500, RefSeq:Os04g0349500