Os04g0350300

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Revision as of 11:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0350300| Description = Similar to Phragmoplast-associated kinesin-related protein 1 (Fragment)| Version = NM_001059066.1 GI:115457861 GeneID...")
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Gene Name

Os04g0350300

Description

Similar to Phragmoplast-associated kinesin-related protein 1 (Fragment)

Version

NM_001059066.1 GI:115457861 GeneID:4335552

Length

4724 bp

Definition

Oryza sativa Japonica Group Os04g0350300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16723642..16728365

Sequence Coding Region

16723642..16723722,16724405..16724550,16725114..16725263,16725353..16725482,16725592..16726251
,16726345..16726443,16726522..16726674,16726787..16727518,16727802..16728104

Expression

GEO Profiles:Os04g0350300

Genome Context

<gbrowseImage1> name=NC_008397:16723642..16728365 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16723642..16728365 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aggaccggggcaacaagcgcaaatgcagacagctcacgctcacattgcgtttttacatgtgtcatcaagtctgaatcaaagaatctggaggatggctcaaacagcacaagaacaagccggatcaacttagtagatctagctggatcagaacgacaaaagttaacccatgcatttggtgatcgcctaaaagaagcaggaaatataaaccgctcactttcacaacttggaaatttgatcaacatattggcagaaatatcacagtctggaaaacaaaggcatgttccatatcgagattcaaagctgacatttctattgcaagaatcactgggtggcaatgccaaacttgcaatgatttgtgctgtttcgccttctcaaagctgtaagagtgaaacattaagcactcttagatttgctcaacgtgcaaaatctataaaaaacaatgctgttgtcaatgaacaaaaggaagaagatgtcaacatgctgcgtgagcaaatcaggcagttaaaggatgaacttcatcgaatgaagtctggaggttcagatggaagcaacggcagtttttccactggatggaatgctaggcgtagtctgcatctactcaaaatgagtttgagtcgtcctacaacattccaaactatccatgaagatagtggtgatgtggaaatggaaatcgatgagaatgatgttgagaagccctataatcaagacaatatggtaatatctcctcctggagataaagaatgtaaagaattacaggcttcattgaaaattaatggtggcacttcccttgatgtttttgatggggagaatctcatgccaacaaaaaggtcatgctctgatgacagatataagttaaatcttgctgccagtatacagagagggcttcaagtcatagaaaatcatcaaaacaatggagcttggaggagagcatcagttgggttcaatgctagaattgtggatgttcagccttgcaaggttgatgtagcgatccaaactgagccagaagaatctgaagcaagagacaaccctttggctctaatttcttctcatgtacttgggacttctgctaccgtgagcaatgatcccaatgcatgcagggatctgcaattagtacaatatgatgcaggaataacacgtgatgaaccaaaacagcaacaaattctgaaagctgtggagaaggtcttggctggagcaatcaggcgagagatggcacgtgatgaacagtgtgtaaagcaagctgctgaaatccaacagctaaatcgtttggtacaacaatacaagcacgaacgcgagtgcaatgcagttatcgcccaaacacgagaaggcaaaattgctaggctcgaaagtctgatggatggaactttaccaacagaagaatttatcaatgaggagtatctatctcttatgaatgagcacaagatactccaacagaaatatgaaaaccatcctgaacttctacgtgctgaaatcgagctaaagagacttcaggaggaactggagctgtgccggaattacattgatgagaaggaagttctacaagaagagatacaggatctaaaaagtcatttgcattttatgctttcatcatcagcatcgattcgcaggctctggcctccagtgcaattgtctcacggcgttggtccttcacctgtaacaaatgatgctgatggtgataataatgctgttgacacaccagattgggctgaagctgagagtaaatgggtaactctcacagaagaacttagagttgaacttgaagcaaataaatctcttgtaggaaggctgcggtcagaattggagtctgaaaagaagtgctcagaggaagtaaaggaggcattacaaacagcaatgcaaggacatgctagaatcttggaacagtatgctgaacttgaggagagacacattggtttgctcgcaatgcataggaagatccgtgagggtgttgaagatgtgaaggcgagagctgcaaaagctggtgtcaagggagctgaattgcggttcatcaattcccttgctgccgaaatggcagttctgagagcggaaaacaaaggccttcaggaccagctaggggatactgctgaagctgttcaagcagctggtgaattacttgtacgattgaaagaggctgaggaagcagaagcacttgcccagaggcgagcattgttggcagagcaggagacggagaaagcgtaccaggagattgataacttgaaaaagaactacgaccaggaaatcgttgccctaaaccagcgcctctcggaatcatctcatcatcaagaaactactctggccattgaagcttgcgacatggagactacaaagtatgatacggctgggagccccggtgaccagcaatggcgggaggagttcaaccagcagggcgggtcgtttgaggtctccaagagcactgatctcaactcgtggttttccgggtacgacaaatgtaacatctga</cdnaseq>

Protein Sequence

<aaseq>RTGATSANADSSRSHCVFTCVIKSESKNLEDGSNSTRTSRINLV DLAGSERQKLTHAFGDRLKEAGNINRSLSQLGNLINILAEISQSGKQRHVPYRDSKLT FLLQESLGGNAKLAMICAVSPSQSCKSETLSTLRFAQRAKSIKNNAVVNEQKEEDVNM LREQIRQLKDELHRMKSGGSDGSNGSFSTGWNARRSLHLLKMSLSRPTTFQTIHEDSG DVEMEIDENDVEKPYNQDNMVISPPGDKECKELQASLKINGGTSLDVFDGENLMPTKR SCSDDRYKLNLAASIQRGLQVIENHQNNGAWRRASVGFNARIVDVQPCKVDVAIQTEP EESEARDNPLALISSHVLGTSATVSNDPNACRDLQLVQYDAGITRDEPKQQQILKAVE KVLAGAIRREMARDEQCVKQAAEIQQLNRLVQQYKHERECNAVIAQTREGKIARLESL MDGTLPTEEFINEEYLSLMNEHKILQQKYENHPELLRAEIELKRLQEELELCRNYIDE KEVLQEEIQDLKSHLHFMLSSSASIRRLWPPVQLSHGVGPSPVTNDADGDNNAVDTPD WAEAESKWVTLTEELRVELEANKSLVGRLRSELESEKKCSEEVKEALQTAMQGHARIL EQYAELEERHIGLLAMHRKIREGVEDVKARAAKAGVKGAELRFINSLAAEMAVLRAEN KGLQDQLGDTAEAVQAAGELLVRLKEAEEAEALAQRRALLAEQETEKAYQEIDNLKKN YDQEIVALNQRLSESSHHQETTLAIEACDMETTKYDTAGSPGDQQWREEFNQQGGSFE VSKSTDLNSWFSGYDKCNI</aaseq>

Gene Sequence

<dnaseqindica>1..81#764..909#1473..1622#1712..1841#1951..2610#2704..2802#2881..3033#3146..3877#4161..4463#aggaccggggcaacaagcgcaaatgcagacagctcacgctcacattgcgtttttacatgtgtcatcaagtctgaatcaaaggtagttctattaatcatactatcatgtactttcaacttttatttggtcatgtccttttcctagcgattgtgatgctgtatcttatcctgtttatgtgagctgataattgttccgagtgggttttccacttcacctgtctgcatcttatttatagtttatttcattctgctgaagcatacgccaaatgccaaatgtagatgcttgtgtgatccctgatagcttgaagccttgaaggcacatttggatagtttaggcatataactcttcttctcccagcatcacattctgtttctttgagtatgataaaattgtcatggaacacaatattctgtttatggcacttgtttgactgtgtttgcactatgcaatatgcaaatttcaatattgtagctgcacatgttcaactttgatacggactgtcaacttctagaagaagagcttccgttgcttatataaataggatgtttctcttttgcattcttttcttcgccgttgtcttctgtagtcatccatattttgttgtgatcgtattatcccatgattttcgttgcatggataaaatgataatgggccaaccggttgcattattcaatccaaataatagtaaacatgttctcttaaactgttgctagttctacttttgaatttctttgttctttaatgccttgttattgttctatagaatctggaggatggctcaaacagcacaagaacaagccggatcaacttagtagatctagctggatcagaacgacaaaagttaacccatgcatttggtgatcgcctaaaagaagcaggaaatataaaccgctcactttcacaacttgggtatggttctgtttatacataacactaaagataaaggtttatttaacacataatctgaccatctttgtcctgatatagtctttattgattatctcatagactgttatgcttaaggtcagtatttaagtaaatgggttgtagtttgtcatgcatgcatggaagttatgttttgtgaagtctactttcattatcatctttttgttactgatataaagctacagttctgttcttgctcacaacatatcagatttgtttttcatctgattgctagtttattatatacatgtctattgttttgggcacaaaccgataaccgatattagttatataaatgatatatctattgtgcagagagtttttttatttgattgctagtttataaagcattaactgagtgggtaatggggttaatcatggaaagaaacaccgtgttatcaagacgaaatgtttagcacagaatgaataaaaatatacatttatttcaaaatgtagtgtgctttagtttgattagtcaaaatgtggtgagatggagaatcttatttttatgcttttggccactgcagaaatttgatcaacatattggcagaaatatcacagtctggaaaacaaaggcatgttccatatcgagattcaaagctgacatttctattgcaagaatcactgggtggcaatgccaaacttgcaatgatttgtgctgtttcgccttctcaaaggtactaccaagtagaaccaaaagccacttttctcttctttttaaatatttgtcctgactcctgactgtattttcaatattgtaatgcagctgtaagagtgaaacattaagcactcttagatttgctcaacgtgcaaaatctataaaaaacaatgctgttgtcaatgaacaaaaggaagaagatgtcaacatgctgcgtgagcaaatcaggcagttaaaggtataatcgcgttcttgttgttgactttgttgtctccgtaatgttttgttgttctgactcaagttgtccactaatgtcttattttctgtatgctatgactacattgcaggatgaacttcatcgaatgaagtctggaggttcagatggaagcaacggcagtttttccactggatggaatgctaggcgtagtctgcatctactcaaaatgagtttgagtcgtcctacaacattccaaactatccatgaagatagtggtgatgtggaaatggaaatcgatgagaatgatgttgagaagccctataatcaagacaatatggtaatatctcctcctggagataaagaatgtaaagaattacaggcttcattgaaaattaatggtggcacttcccttgatgtttttgatggggagaatctcatgccaacaaaaaggtcatgctctgatgacagatataagttaaatcttgctgccagtatacagagagggcttcaagtcatagaaaatcatcaaaacaatggagcttggaggagagcatcagttgggttcaatgctagaattgtggatgttcagccttgcaaggttgatgtagcgatccaaactgagccagaagaatctgaagcaagagacaaccctttggctctaatttcttctcatgtacttgggacttctgctaccgtgagcaatgatcccaatgcatgcagggatctgcaattagtacaatatgatgcaggaataacacgtgatgaaccaaaacagcaacaaattctgaaagtaagtttaaacaaaagatatttatatgcattttttatgccagcttattaaagttacaatatcagcatttacaaataatatttgtctgtataggctgtggagaaggtcttggctggagcaatcaggcgagagatggcacgtgatgaacagtgtgtaaagcaagctgctgaaatccaacagctaaatcgtttggtaggtgccttaactctattctttaacaattaactatgtgttttctctgttctgctgtcttagtcatcctgcttgcaggtacaacaatacaagcacgaacgcgagtgcaatgcagttatcgcccaaacacgagaaggcaaaattgctaggctcgaaagtctgatggatggaactttaccaacagaagaatttatcaatgaggagtatctatctcttatgaatgagcacaaggttacctttcaccgaacttcccatccatttcatttcctacatgtgtaccacaacttatattttggagtcataactttcttattggctaatttccttaaactgatgcaaacagatactccaacagaaatatgaaaaccatcctgaacttctacgtgctgaaatcgagctaaagagacttcaggaggaactggagctgtgccggaattacattgatgagaaggaagttctacaagaagagatacaggatctaaaaagtcatttgcattttatgctttcatcatcagcatcgattcgcaggctctggcctccagtgcaattgtctcacggcgttggtccttcacctgtaacaaatgatgctgatggtgataataatgctgttgacacaccagattgggctgaagctgagagtaaatgggtaactctcacagaagaacttagagttgaacttgaagcaaataaatctcttgtaggaaggctgcggtcagaattggagtctgaaaagaagtgctcagaggaagtaaaggaggcattacaaacagcaatgcaaggacatgctagaatcttggaacagtatgctgaacttgaggagagacacattggtttgctcgcaatgcataggaagatccgtgagggtgttgaagatgtgaaggcgagagctgcaaaagctggtgtcaagggagctgaattgcggttcatcaattcccttgctgccgaaatggcagttctgagagcggaaaacaaaggccttcaggaccagctaggggatactgctgaagctgttcaagcagctggtgaattacttgtacgattgaaagaggctgaggaagcagaagcacttgcccaggtatgaatttccaatgctcaaatgcatctgtattccaacatatttgtcagtatgctgcttgcaatgcgcttgatatagataattgacgtattacggcacaactataaattttagatgacacctaactttaggaagaaaatgcagattgacagtgccgtatcgcagttcatgcgtgcttttaccagcctaccttgttgattgttccatattttccctgtatttccatatgtgctagttaccatttctcccaagttatgcttacagttgtatttatttgttgcagaggcgagcattgttggcagagcaggagacggagaaagcgtaccaggagattgataacttgaaaaagaactacgaccaggaaatcgttgccctaaaccagcgcctctcggaatcatctcatcatcaagaaactactctggccattgaagcttgcgacatggagactacaaagtatgatacggctgggagccccggtgaccagcaatggcgggaggagttcaaccagcagggcgggtcgtttgaggtctccaagagcactgatctcaactcgtggttttccgggtacgacaaatgtaacatctgatgatgatttgcacacttttgttcagttctttgtacctttgtattgctagcattgcatgttgtaccaccagctggtgagcacaagagaggaagaagagagttaatcctgaagatgtgtgtactacctcttcactgtcttgtgaggagggcgcggcaagattcttcggattctcccccccaaaaaaagaggttgtattgatctgtcttgtaaattcagatggacactttacatatgacaagagcaacaacgatgttcatgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0350300, RefSeq:Os04g0350300