Os04g0354600

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Revision as of 11:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0354600| Description = Similar to Acyl CoA reductase-like protein| Version = NM_001059076.1 GI:115457881 GeneID:4335562| Length = 6387 bp| ...")
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Gene Name

Os04g0354600

Description

Similar to Acyl CoA reductase-like protein

Version

NM_001059076.1 GI:115457881 GeneID:4335562

Length

6387 bp

Definition

Oryza sativa Japonica Group Os04g0354600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16966186..16972572

Sequence Coding Region

16966246..16966324,16967429..16967532,16968262..16968461,16969360..16969460,16970214..16970409
,16970501..16970662,16971049..16971130,16971208..16971474,16971596..16971723
,16972091..16972271

Expression

GEO Profiles:Os04g0354600

Genome Context

<gbrowseImage1> name=NC_008397:16966186..16972572 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16966186..16972572 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagacaggaggcatagcggagcgtttcagagacaagactatactcatcaccggcgctactggcttcctgggaaaattgctggtggagaagatactgcgagttcagccggaggtgaggaagctatacctgctagttcgtgctccggacgccatagccgccgaggagcgtgttctcactgaggttgtaggaaaaggtctatttgatgttctacgagaacaatacggtgctggattcaactccttcatcaaggaaaagatatatgctctacctggagatgtgatgcatgaaaactttgggcttgagagttatgaggtcctgcagttatcccagaaggtagatatcatcgtcaatggagctgcaacgacaaactttatggagaggtatgacgtagctttggcaacaaacgctgcaggagtcatgcatttatgtcagtttgcaaagcagtgtgataatctcaagatggtgcttcatgtttccactgcttatgtagctggtgagcaagcaggccagttactcgagaaaccattccagatcggtagagcactacgactggattaccaattggacattgaagctgagctgcaattagtggacagtatcaagtcagaactcagaataaaatgttccagtgatgacaagttagagaaaacaaccatgaggaaacttgggcttaaaagggccacgcactttggttggccaaatacatatgtgctgacgaaagctatgggggagatgttacttcaacaattgggacaagaccttccggttgtcatcgtccggccaagcatgataacaagcacttttcaagaaccaatgcctggatggatagaagaaactaggacaattgatgtcatatttgttgcctacaatgaccaaacccttccatgttttatatttgatggtagcgttatatttgacttgatacctggggatatggtgatcaacgcaatgatggctgccataaatagtcaatggaataaacgagctcaagtgatataccatgtgacttcggctcaccaaaatcccctaccagtatctcttattgaagaatcaatgttcagatactttgacataaatccacgtacaagtaaagatgggaaggcaataaaaaataaaagaccactagcattcaagagattagcatacttccaggcatacatgattctacggtacaagctgccattggagatgatgcgtgcagcaaatgtactgttgggagggatatacaccaagaactactatgagtttaaccgagactacaacattttaatgactgtggcaaagctgtttgccccgtatgtcttcttcaaaggatggtttgatgacaccaacctgaggaaactgtggaaggcgacggctatggaccaaaatgatgatgcatccatatttaattttgatcctaagtgcattaactggagctcatacctcgtgaacacccacattccagctgctataaagtatgccaatgaccagaaggcgaaagcacgtagtgcataa</cdnaseq>

Protein Sequence

<aaseq>METGGIAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYL LVRAPDAIAAEERVLTEVVGKGLFDVLREQYGAGFNSFIKEKIYALPGDVMHENFGLE SYEVLQLSQKVDIIVNGAATTNFMERYDVALATNAAGVMHLCQFAKQCDNLKMVLHVS TAYVAGEQAGQLLEKPFQIGRALRLDYQLDIEAELQLVDSIKSELRIKCSSDDKLEKT TMRKLGLKRATHFGWPNTYVLTKAMGEMLLQQLGQDLPVVIVRPSMITSTFQEPMPGW IEETRTIDVIFVAYNDQTLPCFIFDGSVIFDLIPGDMVINAMMAAINSQWNKRAQVIY HVTSAHQNPLPVSLIEESMFRYFDINPRTSKDGKAIKNKRPLAFKRLAYFQAYMILRY KLPLEMMRAANVLLGGIYTKNYYEFNRDYNILMTVAKLFAPYVFFKGWFDDTNLRKLW KATAMDQNDDASIFNFDPKCINWSSYLVNTHIPAAIKYANDQKAKARSA</aaseq>

Gene Sequence

<dnaseqindica>61..139#1244..1347#2077..2276#3175..3275#4029..4224#4316..4477#4864..4945#5023..5289#5411..5538#5906..6086#ggacaaacaacctgacgacacagagaggttgcgagctctaggaagatatatcgatacgccatggagacaggaggcatagcggagcgtttcagagacaagactatactcatcaccggcgctactggcttcctgggaaaatgtactctctctagctaaaatatgtcttcatattatgtgtgttcatctctagttttggtgattttcatttcgcatatataatgtcatatggcttcattgattggtatttatacattatctcaccgtgggcagtatataaacttttcgactgatcatcatcgatccagagtatatagaaagctatcattttctgcaaactcgattgcacgttctggcgtggagttggagttgtaaaaaataatccactcaatagtgtaaataaaatgttattgggccttagtgtaaaaaaagatgaagctgtttatactttgcagttattggataaggatgaatacactcgaccccatattaattggtaccgattagaagcccaccatagatgttggttatcctctattaattgacaccattggaaatttatcataggtgtcagtttcatagctggtatcaatgtaaaggtgtgtggtcactgaaatataggtgacagttcagttttaggttaacaaccgacacctatattatatatgttggttttttttttctaatctgtacctatactatacgttagaaaagatgtcggtttcggttgaactggcaccaatgggccatcccataagagggattctgcagtagtgcttgacgacatgtttgtaaagtgttttacattacaaattagctagaaacattctgctttgaggaaaaagtaaagacgagctaccttgatgttaatatgtatagtgagaaaaaaatgacttgtagactactataaaaaaatgttttcgtagatgccctccattttgctgcatagagggttttctaggccacaattctacatgtggatgggtcaggctatttaattttttgagatgattgttttaacatactctctataaaagtataatattttcatagacggtcggtcaaagcctgttgatctaaaagcacataatgtaaattcccttttagcctgctataaaaaagctttaattttattggtagaaaataattaatgatgtgggtttttcttattttcaaaagaacttgtatgtccgtttgtacatatgtgaatgctacacatgcttattactgtctacgacgtacgcagtgctggtggagaagatactgcgagttcagccggaggtgaggaagctatacctgctagttcgtgctccggacgccatagccgccgaggagcgtgttctcactgaggtacaagtacaaacgagcccacagattttgctacggttttcaactcgttctgcacgctgaaatgcattactactattctaacatatatacagcttggcaaatcttaattaattaattaattcgcagtgacagaagatggatgcttacggccccatcgtttggcttattcaggatgcaatgtttggctcattcaggaaataagccaaacggtatatttgcaatgtttggctcatttaggaaataagccaaacaacatattagtaaacgaaaaataatttgtgaataaaactatatatgcatattctttacgatctaaaaacaaaggctgaaaaataaacttacatgaaaaaaaaatcttaaaatcaactctaaatttatggttgaaaatttaaattttggctcataagcgtaagcagatgcaaaaaaaaatgaggctattaatttcatttccttaatgaaatctctactgtagctaccagcaaaaggcatccaatatagtattgcaagattaattaagtattaactatatattacaatctttgaaaactgaattttggaaacttctatatataatgttttccagaagtggcaccttttattggttgaaaagcatgccgacgataatccaataggcaatagccaaaaattacaccttatgtataatattgctagagcttcggttaaatgaataagaggattaatcaacctggtttacttgttgctgtataggttgtaggaaaaggtctatttgatgttctacgagaacaatacggtgctggattcaactccttcatcaaggaaaagatatatgctctacctggagatgtgatgcatgaaaactttgggcttgagagttatgaggtcctgcagttatcccagaaggtagatatcatcgtcaatggagctgcaacgacaaactttatggagaggtatatatatacatatcatataacgtcactctcgggggatttcaatttgttatttccaagagtgccttatgattgaaagatgtttgggttgctgaatgaaacaaatgtctccaatgcgcataatctcatttcatgatttcatatgctatatcacagcatttaattattgaatgaagttatgaaactatttaattacaacgaggtttaattcatttccgtttccaatgcatcggatgaaattatttagtcccaatgaggtttcattaattatgtttataaggcatagttaaatgtgtaaaccaagtttcatccagatgaaactcacttcttctctctcttaataatttttatgacacgccataagttttccttgtatgacgtttcatcatttagtgagaatgaaatccttacgaaacttgcactgggaatggtataagaaccaagttttactttgtatattttagagaaggaccgtatgtctcactttgcagaagatgaaatctcaagaagaataattaattgtactcttgaaggcgaggtgccagaaaatttatatataaaaaaataatctgtaaaaatctttatactgaagaatgctgataatatttcaccccatcgaacaaaactatgtatatactatatatatattgatggcatagcatatatatatatgtgaaaaatcatcctaaaacatcattaaaactcaaagccgccgccgttatgcatgtccaatgaaacacatatataacatggaatacctagacacactgacgaccctaaagagaatgacacacacaattgtgagcaagcttcagtttcaactgttcgctttcaaccaccaatgacatgcatggcattaagaatatatgtcataatctcattgggtcgctgtgtgcaggtatgacgtagctttggcaacaaacgctgcaggagtcatgcatttatgtcagtttgcaaagcagtgtgataatctcaagatggtgcttcatgtttccactggtaagcttatatgaatgcttcatctaccccaaaataattcaaataatagcatatcacctaatagcagcacaaatcagaataggacctatctcatcgtgtcctaggatttattttttggccatgtgacatttattctaatttcagttttacggcccaaaattttaagtaactttctaaattttgattctatcgggcatcataatgttttatttcctcaatataaaaccctcgtccttccccccttgcctctgtaagaccttatttttgaaaatccacaatagcatagctcagctcttcattttagtggccagctgatgcacaatatcacatttaaatttatggctcacttcagacaaaatgtgctgacttcacctatccatgcatgcgtacgactccagccaatctcacagtacgacccatctcctccatacaaccacaactcacttcctcgccaccgaaagtacacacctctgattgacccaccatgtgatccctcaaatctaattgacccacttatgttttaatatgcccccacttatacagcttctttggcttttccaacatttcgagtatcacagtttatcctaagcaaactcaaaatcctaatattagtgatttgcttgcaaatccaccactgcaccacaaattagccaacataaaacgaaggtttctatgtgcaacacttttatagtaaattgtatcgtaaacatatatattgtcaaagaggtgatgtcctaaatttgctacgaacagcttatgtagctggtgagcaagcaggccagttactcgagaaaccattccagatcggtagagcactacgactggattaccaattggacattgaagctgagctgcaattagtggacagtatcaagtcagaactcagaataaaatgttccagtgatgacaagttagagaaaacaaccatgaggaaacttgggcttaaaaggttttaaagaaagaatcttttttatatcttgtagctttgcaataattccatgggtatgaataatatgatataatgatggatttttatgaagggccacgcactttggttggccaaatacatatgtgctgacgaaagctatgggggagatgttacttcaacaattgggacaagaccttccggttgtcatcgtccggccaagcatgataacaagcacttttcaagaaccaatgcctggatggatagaagaaactaggtggatatattctagtgtattatacatattgttgttagttgctacacttggttataaaaaataattgtctaatttattaactccaaccctttgaccttacttgtctgcagtataattagatgctatttgagaaataattaccttttgagaaatttagagtccttaaggaggtacttggtggtacaatattttctatttttaaatgtaatattttttggtgccctaggtactaggcaatattttttaaaatcacttttgcaattttatttgctgaattatttgtattttgtaaaagaaaacatatatgtgctgagtgccaattatttgtcttttgtattactagtccaattagtggaatatttagatgctacaaacttttattgcaggacaattgatgtcatatttgttgcctacaatgaccaaacccttccatgttttatatttgatggtagcgttatatttgacttggtgagtatttcccaaccaatatacatatatatataaattcatatctggttatttatggaagtttgtaaattacacagatacctggggatatggtgatcaacgcaatgatggctgccataaatagtcaatggaataaacgagctcaagtgatataccatgtgacttcggctcaccaaaatcccctaccagtatctcttattgaagaatcaatgttcagatactttgacataaatccacgtacaagtaaagatgggaaggcaataaaaaataaaagaccactagcattcaagagattagcatacttccaggcatacatgattctacggtacaagctgccattggaggtacagacattacatttcttgattagttccagaaatccccccccccccctcccggcccagtttaggtacaaattgatttgatttgctgactttggcatgttgatcttctgataataaccagatgatgcgtgcagcaaatgtactgttgggagggatatacaccaagaactactatgagtttaaccgagactacaacattttaatgactgtggcaaagctgtttgccccgtatgtcttcttcaaaggatggtgagcttacttctgatgtccctttagtagactgaaaaatggaaactgtgtattaatttctggtacgttttaatttgagcttcccctgccactctcattgttcagaagaaaatagcacattcttcttagcaagacaatcttatacttttctagaactaatgatcttcctataattgacaatttccctttctgaattaaaataaagtacacatatgctttctaagattttttttactaaactacatactgtaaatagaaaaaaaatctatcattcattgaagtaggtaataaatctataactgcattctttcttgatttacctacacgctgattttccttctgcatgcatatatacattttgatgaaggtttgatgacaccaacctgaggaaactgtggaaggcgacggctatggaccaaaatgatgatgcatccatatttaattttgatcctaagtgcattaactggagctcatacctcgtgaacacccacattccagctgctataaagtatgccaatgaccagaaggcgaaagcacgtagtgcataaaaatacatttagatgatggtgtacatgcaaggtgttagtttgcatggtgaatatattgctattattatatgaaaaatattataatgctaagattgtgatagctcaattatgcggaataagtcatccgtgtcagagttgtgtggagtggtgtgtgttgtagggctctagccccttctctctcttcttaatataatgaggcgcagttctcctgtatttttcgagaaaataaaagtcatctgtgtcgggcgggaaccctcatcaatggcagtgagaccgcttactatgcactgttgccattgct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0354600, RefSeq:Os04g0354600