Os04g0368800

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Revision as of 11:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0368800| Description = EGF domain containing protein| Version = NM_001059093.1 GI:115457915 GeneID:4335587| Length = 3485 bp| Definition =...")
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Gene Name

Os04g0368800

Description

EGF domain containing protein

Version

NM_001059093.1 GI:115457915 GeneID:4335587

Length

3485 bp

Definition

Oryza sativa Japonica Group Os04g0368800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:17927293..17930777

Sequence Coding Region

17927293..17928470,17928932..17929102,17929826..17930777

Expression

GEO Profiles:Os04g0368800

Genome Context

<gbrowseImage1> name=NC_008397:17927293..17930777 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:17927293..17930777 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgttccagttccacacgctactatcagccgtaacaatatggctgggcgtagcggctgctacggcgaggctccatgccgccgtcgccggagcacgagcgccgccgccgccgccgccgcccggcaactgccaaaggaagtgcggcgacgtagacatcccctacccgttcggcgtctggaacggcagcgagtccgacggctgcgccgttccaggcttctacctgaactgcgacgtcgacgacaaccacgtctacaggccgttccacgggaatgtggaggttctcagcatctccctgccgaccgggcaggcccgggtgacgaactccatctcctccgcttgctacaacaccagctcccgcgacatggactacaacgactggcagatcaacttcaccggcacgccgctgacgatctccgacgccgacaacaagttcaccgtcgtcgggtgccagacgctggcgtacatcaccgacgacgacaacatgggcaagtacacgagcgggtgcgtcgccatgtgccagggaggcgacctgacgagcctcgccaccaacgggtcgtgctccgggataggctgctgccagacagccatccccaggggtctgaagtactaccgcgtcaggttcgacacgggcttcaacacctcggagatctacaacgtcagccgctgcagctacgcggtgctgatggagtcgaaggccttcagcttccggacgagctacgtgagctcgctggaatttaacagcagcaacggtggcagggtgccgttggtggtggattgggctatcggaaacgagacttgtgataaagcccgcagaaaggttgacacctatgcatgtgtcagccacaacagcaagtgcttcaactcgtccaacggaccaggctacatctgcaactgctccgaagggtaccaaggtaacccctacctgcaggacgggcagcacggttgcacagatatagacgagtgtgcggatccgaagtacccttgttccgtgcctggaacttgccataatcttcctggcgggttcgagtgcttatgccctcgcagtcgtcccaaaggcaacgcattcaatgggacatgcgagagagatcaaacccttcatactggaggaaaagtagctattggaatttccggttttgctatcgttggcctcgttgtttttcttgtacgagaagtgatccagcacaaacgaagtatcaaaagacaagctctgcagagacagactgacatgtattttcaacaacacggaggacagatcttactagaactgatgaaagtagagagcagcgctgagttcaccctctacgacagagagaagatcgaggtagccacaaacaatttcgccaaggagaacattgttggcaaaggagggcaggggaccgtttacaaggctgtcctcgacggcaccactgttgcgataaagaggtgcaacgaggttgatgagagcagaagagccgacttcgtgcaggagctggtcatactctgtcgtgtcaaccacccaaatatcgtcaaactagtcggctgctgcctgcagttcgaggcccccatgctaatctatgagttcgtgcagaacaagacactgcaagagctactggacctccaaaggagtaggaagttccacgtcacactggcgacccgcttaaggattgctgcagaatccgccaatgcacttgcacatctccactcactgccgcgcccaatactccacggcgacgtgaagccagccaacatacttcttgctgaaggattggttgcaaaggtgtctgactttggttgctcaacgattgatgagaaaacccaagctgttgtaaaaggtacaccgggatatctcgacccagactatctacttgagtaccagctcacagccaagaatgatgtatacagctttggggtcattcttcttgagctcctaacgggtaagaagccactttcaaaagaacggacgagcttgatcccaatatttcaaggggcaatggaaagtggcaaactcgttgagctcctggacagtgacatagtagatgaagccaacatgggagttatctgtcaggcagcatcactagctagtcaatgcttggctaatccaagttcatcaaggccaacaatgaggcaagtggcggagcagcttcgacgactagcattggcagatgaagtacaacaatgcccacaaccgccgctagtgctcgatggcctcatcctcacagagatggggagcacaacatcatcatggtacacaggaagtggaacaagcggggtttataaccttgagaacaatgtcgttctaagcacagaattcgctagatga</cdnaseq>

Protein Sequence

<aaseq>MAFQFHTLLSAVTIWLGVAAATARLHAAVAGARAPPPPPPPGNC QRKCGDVDIPYPFGVWNGSESDGCAVPGFYLNCDVDDNHVYRPFHGNVEVLSISLPTG QARVTNSISSACYNTSSRDMDYNDWQINFTGTPLTISDADNKFTVVGCQTLAYITDDD NMGKYTSGCVAMCQGGDLTSLATNGSCSGIGCCQTAIPRGLKYYRVRFDTGFNTSEIY NVSRCSYAVLMESKAFSFRTSYVSSLEFNSSNGGRVPLVVDWAIGNETCDKARRKVDT YACVSHNSKCFNSSNGPGYICNCSEGYQGNPYLQDGQHGCTDIDECADPKYPCSVPGT CHNLPGGFECLCPRSRPKGNAFNGTCERDQTLHTGGKVAIGISGFAIVGLVVFLVREV IQHKRSIKRQALQRQTDMYFQQHGGQILLELMKVESSAEFTLYDREKIEVATNNFAKE NIVGKGGQGTVYKAVLDGTTVAIKRCNEVDESRRADFVQELVILCRVNHPNIVKLVGC CLQFEAPMLIYEFVQNKTLQELLDLQRSRKFHVTLATRLRIAAESANALAHLHSLPRP ILHGDVKPANILLAEGLVAKVSDFGCSTIDEKTQAVVKGTPGYLDPDYLLEYQLTAKN DVYSFGVILLELLTGKKPLSKERTSLIPIFQGAMESGKLVELLDSDIVDEANMGVICQ AASLASQCLANPSSSRPTMRQVAEQLRRLALADEVQQCPQPPLVLDGLILTEMGSTTS SWYTGSGTSGVYNLENNVVLSTEFAR</aaseq>

Gene Sequence

<dnaseqindica>2308..3485#1676..1846#1..952#atggcgttccagttccacacgctactatcagccgtaacaatatggctgggcgtagcggctgctacggcgaggctccatgccgccgtcgccggagcacgagcgccgccgccgccgccgccgcccggcaactgccaaaggaagtgcggcgacgtagacatcccctacccgttcggcgtctggaacggcagcgagtccgacggctgcgccgttccaggcttctacctgaactgcgacgtcgacgacaaccacgtctacaggccgttccacgggaatgtggaggttctcagcatctccctgccgaccgggcaggcccgggtgacgaactccatctcctccgcttgctacaacaccagctcccgcgacatggactacaacgactggcagatcaacttcaccggcacgccgctgacgatctccgacgccgacaacaagttcaccgtcgtcgggtgccagacgctggcgtacatcaccgacgacgacaacatgggcaagtacacgagcgggtgcgtcgccatgtgccagggaggcgacctgacgagcctcgccaccaacgggtcgtgctccgggataggctgctgccagacagccatccccaggggtctgaagtactaccgcgtcaggttcgacacgggcttcaacacctcggagatctacaacgtcagccgctgcagctacgcggtgctgatggagtcgaaggccttcagcttccggacgagctacgtgagctcgctggaatttaacagcagcaacggtggcagggtgccgttggtggtggattgggctatcggaaacgagacttgtgataaagcccgcagaaaggttgacacctatgcatgtgtcagccacaacagcaagtgcttcaactcgtccaacggaccaggctacatctgcaactgctccgaagggtaccaaggtaacccctacctgcaggacgggcagcacggttgcacaggtatgaaaactgatccatttaagggtgagagaggaattgtatacgtgaatatatacacataaacaaatgaatcacatagccaagtgagaattggtgtggatatttcttgattttaaatgcttttacggtactcatttactagcagaattgaaatatataacagttgattatcataagcatttaaaaagtttagccaatgcaaggtaattaacattcatctactgtaatttggaatgatttttcaatttaatttattattttattactatatatttattttaagttcaattttaccactttaaaatttgtactacactaattaaattttgaaatatactttatcacaattttacgggaatttactagctagattaaaaaatatttaaatatacccgattcgcctcgagaaggtgacacctggaataaattaaaaatatatatctatctaattaacttgtttagttgtaatatcaagacagttaagatgtactatatttccctacactttttaacatagcttatgagagaaaacatgcatcagaattttttttttgcctttatcttttgattagtttagtatgagtcacagaatctgaggttcattatattattaatatatgattaatacacaaaacatcacaatttcccacaagaaaatcatattgcccatgtatatatgatagcaaatcactgtttatttttacctatgtttgattaatgcagatatagacgagtgtgcggatccgaagtacccttgttccgtgcctggaacttgccataatcttcctggcgggttcgagtgcttatgccctcgcagtcgtcccaaaggcaacgcattcaatgggacatgcgagagagatcaaacccttcatactggaggaaaagtagctattggtactccattatcctcgcttatcattccaagttctttttccttatccaaaaatcagtagctaagattttccttatgttaggccatagcatccacatgttccacaccagtttatatggattctccacaaaagaaaacaaaaactaattttaatctgtttgattagtcatggaccccaaccgatacgtcactctcagaacttttcagaaaaagaactgaaagtgtaactacatagagttctaaaccgttagtccgttacatgatgtcgacctgtaattaacttatttatttggaataggaagatgattgcatccccgcctttgcatttaggatgtacagtacacaagcatgcagtttaattttgaaagttttttcttaagataaacagtatctgtatatgcagtgctgaagcacttgtttcaattcaacctttagtctcctttacaaatattcatttctgcaggaatttccggttttgctatcgttggcctcgttgtttttcttgtacgagaagtgatccagcacaaacgaagtatcaaaagacaagctctgcagagacagactgacatgtattttcaacaacacggaggacagatcttactagaactgatgaaagtagagagcagcgctgagttcaccctctacgacagagagaagatcgaggtagccacaaacaatttcgccaaggagaacattgttggcaaaggagggcaggggaccgtttacaaggctgtcctcgacggcaccactgttgcgataaagaggtgcaacgaggttgatgagagcagaagagccgacttcgtgcaggagctggtcatactctgtcgtgtcaaccacccaaatatcgtcaaactagtcggctgctgcctgcagttcgaggcccccatgctaatctatgagttcgtgcagaacaagacactgcaagagctactggacctccaaaggagtaggaagttccacgtcacactggcgacccgcttaaggattgctgcagaatccgccaatgcacttgcacatctccactcactgccgcgcccaatactccacggcgacgtgaagccagccaacatacttcttgctgaaggattggttgcaaaggtgtctgactttggttgctcaacgattgatgagaaaacccaagctgttgtaaaaggtacaccgggatatctcgacccagactatctacttgagtaccagctcacagccaagaatgatgtatacagctttggggtcattcttcttgagctcctaacgggtaagaagccactttcaaaagaacggacgagcttgatcccaatatttcaaggggcaatggaaagtggcaaactcgttgagctcctggacagtgacatagtagatgaagccaacatgggagttatctgtcaggcagcatcactagctagtcaatgcttggctaatccaagttcatcaaggccaacaatgaggcaagtggcggagcagcttcgacgactagcattggcagatgaagtacaacaatgcccacaaccgccgctagtgctcgatggcctcatcctcacagagatggggagcacaacatcatcatggtacacaggaagtggaacaagcggggtttataaccttgagaacaatgtcgttctaagcacagaattcgctagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0368800, RefSeq:Os04g0368800