Os09g0570400

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Revision as of 07:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0570400| Description = Major facilitator superfamily protein| Version = NM_001070521.1 GI:115480784 GeneID:4347913| Length = 4230 bp| Defi...")
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Gene Name

Os09g0570400

Description

Major facilitator superfamily protein

Version

NM_001070521.1 GI:115480784 GeneID:4347913

Length

4230 bp

Definition

Oryza sativa Japonica Group Os09g0570400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23599016..23603245

Sequence Coding Region

23599195..23599252,23599549..23600087,23600221..23600328,23600426..23600581,23600951..23601166
,23601374..23601583,23601674..23601811,23601915..23602016,23602124..23602189
,23602338..23602422,23602578..23602675

Expression

GEO Profiles:Os09g0570400

Genome Context

<gbrowseImage1> name=NC_008402:23599016..23603245 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23599016..23603245 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctatgggggccgtgctctccagcagaaccttcgcctctccactctcctcctcaggaaagcagcatccaccacaaaacaacaagtgcacctgttcctcacctcccacccgagataaattcagtcgactcactactaggaccaccattttccaagtctctaactattccaggagcacttcaatggaaagatttcaactttctgcccgattccaccagcctgtggttgactcttctacaaactacctcaccaggtggttttacaatgcaaacctcaagaggcggcggattgaatgctttctcacttcggatccaataaacactggttggctaaaaccaagaagatgggacaacttcactagtttggacactgcttgtgtccagccagactacaaaattccggtcagaacacgcgccgactgtaaagccgagcagtatgagataacgggatcaccgttgagcccttctgatgttcccgccgaggcagttctcattggagatacaaatgagatttctccctggtggcagcagttccctaagcgatggacagtcgttctcttgtgcttcttttccttccttctgtgcaacatggaccgtgttaatatgagtatcgcgatccttccaatgtcatcagaattcggctggagtccagcaactgtaggcctaatccagtcctccttcttttggggttaccttcttactcagatccttggaggtatatgggccgacaggtttggtggtaaggtggtgctaggatttggggttgtctggtggtcaattgcgacagttcttacaccccttgctgcaaagattggacttcctttcctacttgtcatgcgggctttcatggggataggagagggtgttgccatgccagccatgaacaacatactctccaaatgggttccagtttcagagagaagcagatctcttgcattagtgtacagtggaatgtaccttggttcagtgactggcctagccttttcacctctcttgatcagcagattcggttggccatctgttttttacgcattcgggtcccttggaagcgtctggtttgcactttggcaaagaaaagcacacagctccccgagtgaagatcccgaactaagcaaagccgaaaagaggtacattctaggtggaagcaccttgaaggagcccgtcacctccataccttggaagctaattctatcaaagcctccagtatgggctctaatagtatcacatttttgccataattggggaaccttcattcttctaacatggatgcctacatactacaaccaggttcttaagttcaatcttactgaatctgggcttttgtgtgtcttgccgtggctgacaatggctatatttgcgaatattggtggctggattgctgacactcttgttgggaggggggtttccataacgaatgttcgtaagatcatgcaatcgattggtttccttggaccagccctcttcttgacactgctgagcaaagtccgaactccagccatggctgtattgtgtatggcatgcagtcaggggagtgatgccttttcacagtctgggctatattcgaatcaccaggacataggcccacgttatgcaggtgtacttcttggactgtcaaacactgctggcgtgcttgcaggagtttttggtactgctgccactggctacattcttcagaaaggttcttgggatagtgtgtttcaggtggctgtggtattgtacatagtagggacagtggtgtggaatgtcttctcaactggagagaaagttcttgaatga</cdnaseq>

Protein Sequence

<aaseq>MAMGAVLSSRTFASPLSSSGKQHPPQNNKCTCSSPPTRDKFSRL TTRTTIFQVSNYSRSTSMERFQLSARFHQPVVDSSTNYLTRWFYNANLKRRRIECFLT SDPINTGWLKPRRWDNFTSLDTACVQPDYKIPVRTRADCKAEQYEITGSPLSPSDVPA EAVLIGDTNEISPWWQQFPKRWTVVLLCFFSFLLCNMDRVNMSIAILPMSSEFGWSPA TVGLIQSSFFWGYLLTQILGGIWADRFGGKVVLGFGVVWWSIATVLTPLAAKIGLPFL LVMRAFMGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIS RFGWPSVFYAFGSLGSVWFALWQRKAHSSPSEDPELSKAEKRYILGGSTLKEPVTSIP WKLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMA IFANIGGWIADTLVGRGVSITNVRKIMQSIGFLGPALFLTLLSKVRTPAMAVLCMACS QGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQKGSWDSVF QVAVVLYIVGTVVWNVFSTGEKVLE</aaseq>

Gene Sequence

<dnaseqindica>180..237#534..1072#1206..1313#1411..1566#1936..2151#2359..2568#2659..2796#2900..3001#3109..3174#3323..3407#3563..3660#gcttatccacaccacacgtcctcctctcgtctcatcgtcttcccccccaatctcctcctccaggctccaggggccaagcaagatccttcctatgcaacacgagaggggagcagctcccccagagctgagtgagtgagtgagagagagagatcctcttgtgctctgaccaggcggaggccatggctatgggggccgtgctctccagcagaaccttcgcctctccactctcctcctcaggtccgtaatactattactaacttcttttctacactagtagtactattcactgctagctattacgggactccattcatttctctctcattccctataactatgtataacatgacacgcttactgccttcaattgcttgtaacattactgaccaatttattcatcaactgcctatatatacccaacatcataactaactagctagtcagtgtaatcaggttgactataatcaagggcagggccggccatggccatttacacgaaatgtcaacctgattcttccctttgggttttacaggaaagcagcatccaccacaaaacaacaagtgcacctgttcctcacctcccacccgagataaattcagtcgactcactactaggaccaccattttccaagtctctaactattccaggagcacttcaatggaaagatttcaactttctgcccgattccaccagcctgtggttgactcttctacaaactacctcaccaggtggttttacaatgcaaacctcaagaggcggcggattgaatgctttctcacttcggatccaataaacactggttggctaaaaccaagaagatgggacaacttcactagtttggacactgcttgtgtccagccagactacaaaattccggtcagaacacgcgccgactgtaaagccgagcagtatgagataacgggatcaccgttgagcccttctgatgttcccgccgaggcagttctcattggagatacaaatgagatttctccctggtggcagcagttccctaagcgatggacagtcgttctcttgtgcttcttttccttccttctgtgcaacatggaccgtgtgagttgccctttcctttctccaaatatacctcataacaacagttgaattacctcttttttcttttcttttctttttatgtaaggtcattaattataactctcctcctgttttctttactgccttctgccaggttaatatgagtatcgcgatccttccaatgtcatcagaattcggctggagtccagcaactgtaggcctaatccagtcctccttcttttggggttaccttcttactcaggtgcattactgttgtaagccagggatttttatgcgtcagtttctctcacatttgaatctgtcctttgtgaggactaatatttcatactaaactgcagatccttggaggtatatgggccgacaggtttggtggtaaggtggtgctaggatttggggttgtctggtggtcaattgcgacagttcttacaccccttgctgcaaagattggacttcctttcctacttgtcatgcgggctttcatggggataggagaggtagatatctgtgcctctctctactataattcaaactgccactaccatcaagtggaatgtttgtataaacacacttctcgtaatagtccggacaatggttcctctagattaggtttaatgaaatgcaagcaaatgtgagggtggaaattctgtctaacttggagcaattgtctgtcacaaaaacacctgtcatactcctccaaattaagcaaagttaagcttttgaagtaactggtcatcaagtatctcggtgaaaaatgccagtaccactcagtttgctttcattgagtataaaaaaaaacaaagtttttacactgatgcttttcctttcctttatgtgattaattttgttatattatggtttaacagggtgttgccatgccagccatgaacaacatactctccaaatgggttccagtttcagagagaagcagatctcttgcattagtgtacagtggaatgtaccttggttcagtgactggcctagccttttcacctctcttgatcagcagattcggttggccatctgttttttacgcattcgggtcccttggaagcgtctggtttgcactttggcaaagaaaagtaagataaatcaattcatgtactagcttccaacctaaaaatttgcttttgaagtcatttcatttattatgttaaccacataagtaactctggaaatgaccgtactatttggttcttagatgctcattcttgttaattcttacatgactaattgccgttacccctgaaaaaagggctaactggtagtgcatgtctacccttaattaggcacacagctccccgagtgaagatcccgaactaagcaaagccgaaaagaggtacattctaggtggaagcaccttgaaggagcccgtcacctccataccttggaagctaattctatcaaagcctccagtatgggctctaatagtatcacatttttgccataattggggaaccttcattcttctaacatggatgcctacatactacaaccaggttcttacaatttaatacccactgcccatatcagacaatggtagcatatcctgttcttggtggttgtactcaccaggtgctcttatccaggttcttaagttcaatcttactgaatctgggcttttgtgtgtcttgccgtggctgacaatggctatatttgcgaatattggtggctggattgctgacactcttgttgggaggggggtttccataacgaatgttcgtaaggtaaattcttcagtaatagctgtttcctgtatgaacttctgggaatagctgtgctgactgctgagcttttggttttgacatacttttgaaatgtattttgtagatcatgcaatcgattggtttccttggaccagccctcttcttgacactgctgagcaaagtccgaactccagccatggctgtattgtgtatggcatgcagtcaggtttgatattcttctgaaaggctattcatatggatttagcttctgaaccatctattgactattgtcttttaatgcttgttgatcttgatatccaatttctttggcaggggagtgatgccttttcacagtctgggctatattcgaatcaccaggacataggcccacgttatgcagtaatgctctcacatagattgttactgctccaaaattccctagttcacaatagaaattatagtgttactgctagctgtattgatgttaagttgcttctttttaactttgatccatcagctaacgatacaatgttacaaaaaaatgtagggtgtacttcttggactgtcaaacactgctggcgtgcttgcaggagtttttggtactgctgccactggctacattcttcagaaaggtagggatgttgaaaaacatggtatctctagaaatgtcaaacaggacagaccatattttaataatgaatttcatgttcattcttgtggaatatgtatcaatgtgtgtttatgctaactttctcttacgtcttaactttcttttttggactgccaggttcttgggatagtgtgtttcaggtggctgtggtattgtacatagtagggacagtggtgtggaatgtcttctcaactggagagaaagttcttgaatgagctgtagatgctcttatacgcacaaaaagtatagctgattttgctgatgtcttattgtggtacgagaagaaaagctctcgtttagacagagagatatagctgattgaaaaccttcattttagcaagagaaatatagctgcgtttgacggttgggacactgaaaacaatgaagagcaaactgaagagttgcaatggattagtctgtgaactgaaacttggagccagtgaattaccttacgctgcctgaaagcatctgcaccaagaagtgtcagtctttgcagtaagcttgtcgctgaacaagctcctgcccaacttgcttaacatcttcttttgttttgaaatattgatccactagtgaaccagctaccttgcttgctcgaggaaggagctagagctactgccaaactcgtgtattatgagagcattttgggagattaagcttttttttttgttaatttgtgatgctgctcctgttattttgcatatcctgcgggatcgtatcgcatgactatctatgcttgtgctgaatcatcctatgcttcttgttactgttgctagcaaaaactactg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0570400, RefSeq:Os09g0570400