Os04g0372100

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Revision as of 11:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0372100| Description = Protein kinase-like domain containing protein| Version = NM_001059103.2 GI:297602563 GeneID:4335597| Length = 11411 ...")
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Gene Name

Os04g0372100

Description

Protein kinase-like domain containing protein

Version

NM_001059103.2 GI:297602563 GeneID:4335597

Length

11411 bp

Definition

Oryza sativa Japonica Group Os04g0372100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18146079..18157489

Sequence Coding Region

18146079..18146914,18157348..18157489

Expression

GEO Profiles:Os04g0372100

Genome Context

<gbrowseImage1> name=NC_008397:18146079..18157489 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18146079..18157489 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggtagagggcaatgttgggtttaccctctatgagagagggcagatcgaaactgcaacaaataacttcaacaaggcacacattgtcggggagggaggacagggaacagtttacagggcagagatagatggcactattgttgcgataaaaaggtgcaaggagattgatgagagcaggaagatggactttgtacaggagctggtcatactttgtcgtgtcaaccaccctaacattgtcaagctacttggttgttgcctacaatttgaggcacccatgcttgtctatgagtttgtgcaaaatagaacacttcatgagctattggacttccaaaggaacaggagttgccatgtcactttgggaacccgcctgaggattgccgccgagtctgccgatgcgcttgcgcatctccattcgttaccacacccgatactccatggtgatgtgaaaccagcgaacatactactcaccgaagaattggttgcaaaggtgtctgactttggctgctcaacaattgatgagaaaactcaggttgcgcccaagggcacacctggatatcttgacccagactacctgcttgagtatcagctcacagctaagaatgatctgtatagctttggagtaattctggttgaacttctaactggtaagaggccactatcaaaagaaaggaagaccttgacctcaatgtttaaggaggctatgacggatggcacactcattaaactccttgatagtgacattgttaatgaagacaacctgagagtgatccatcaggctgcagtgctagcgagtcagtgcttgattattccaggtacggcaaggccagagatgaggacaaagatttctgctagggctgcagtggaggaggtgagggcgaagcgatttccacagcggccacaaagaggtgggggaggaggtctccaccggcgcacacgggacccaaatgatggtggggacatggaggccggcgagtaa</cdnaseq>

Protein Sequence

<aaseq>MKVEGNVGFTLYERGQIETATNNFNKAHIVGEGGQGTVYRAEID GTIVAIKRCKEIDESRKMDFVQELVILCRVNHPNIVKLLGCCLQFEAPMLVYEFVQNR TLHELLDFQRNRSCHVTLGTRLRIAAESADALAHLHSLPHPILHGDVKPANILLTEEL VAKVSDFGCSTIDEKTQVAPKGTPGYLDPDYLLEYQLTAKNDLYSFGVILVELLTGKR PLSKERKTLTSMFKEAMTDGTLIKLLDSDIVNEDNLRVIHQAAVLASQCLIIPGTARP EMRTKISARAAVEEVRAKRFPQRPQRGGGGGLHRRTRDPNDGGDMEAGE</aaseq>

Gene Sequence

<dnaseqindica>1..836#11270..11411#atgaaggtagagggcaatgttgggtttaccctctatgagagagggcagatcgaaactgcaacaaataacttcaacaaggcacacattgtcggggagggaggacagggaacagtttacagggcagagatagatggcactattgttgcgataaaaaggtgcaaggagattgatgagagcaggaagatggactttgtacaggagctggtcatactttgtcgtgtcaaccaccctaacattgtcaagctacttggttgttgcctacaatttgaggcacccatgcttgtctatgagtttgtgcaaaatagaacacttcatgagctattggacttccaaaggaacaggagttgccatgtcactttgggaacccgcctgaggattgccgccgagtctgccgatgcgcttgcgcatctccattcgttaccacacccgatactccatggtgatgtgaaaccagcgaacatactactcaccgaagaattggttgcaaaggtgtctgactttggctgctcaacaattgatgagaaaactcaggttgcgcccaagggcacacctggatatcttgacccagactacctgcttgagtatcagctcacagctaagaatgatctgtatagctttggagtaattctggttgaacttctaactggtaagaggccactatcaaaagaaaggaagaccttgacctcaatgtttaaggaggctatgacggatggcacactcattaaactccttgatagtgacattgttaatgaagacaacctgagagtgatccatcaggctgcagtgctagcgagtcagtgcttgattattccaggtacggcaaggccagagatgaggtatgtggcagagcagcttcagcaacttgcatttgcagatgaagtgcagcaagatccacagccaccgcttgtgcttgcgggtcttaggtttacggcagagatggcaaatacacgtacaacatcctcatggcaaactgatagcaagactaccggggtttacagcctcgagaagaatgttagactttgctctaggatcacctaggttagatctagtcgggtggttctatttgggattgatgtttgaactatagagattgaaaacgggagagggtttagatagaccgaccggttgaggagttcgtggaggaagaggcgccggacatcgtcgttgtcgtcgcggcttgacgtggatgcgatgccggtgaggtcgacggcgatgacggctgcggcagtacgtcgtagacgtcccggcgatnaggcgtggcgcggcggtggcgtttcccagtcaactnggcngccccctctcgatcggattagggttttgtggggtggagttgcggcgncggtgancttcngtaccnttggtccgtgccgcctccncccctcttttatatggcgcagtgtannngggggcccaccagccatatgncnggcngcccccgatcagggtgcgntcaaggggncgtgagccgttgggctcaaggggagggacctctntcnaacattctcccccttgatctcactttttcttttagctttttctattccatcacagatttctaaatagagcatgtttcatcgtcacggtcaatcgccgatggattcgacagccactatacacatctctattcagaaacagatactttacttttgggccctgtagtccaggattcataaggcttcccttaaacccatgccggctacatgttccttgaacacgttgggtggtaggcctttcgtgagcggatccgcgagcatcctttctgttttaatgtgctcgagactgattgtttgatcccggactttgtccttcacaacatagtactttatgtcaatgtgtttggcagcaccacttgactgattgttgtgagcgtacattactgcgggttcgttgtcgcagtataactttagtggtttctcaatactgtcaaccacctttaaaccgggtatgaacttctttagccagttcacctgccccgttgcctcatagcatgctataaactcggcatacatagtagaccctgcagtgatagtctgttttgagcttttccatgaaatagctcctcctgccagggtaaacacgtatcccgatgttgactttgtattatcttttgcaaagtcagaatctgagtaccccactatctggagtgattctgatcttttgtaagacagcatgaggccttttgttccttgcaaataacgcaagactttctttaccaatttccagtgctctaggcctggattactctgaaatctgccaagtaacccggtaacaaatgccaagtcaggtcgtgtgcacacttgcgcatactgtaggcttcctacagctgacgcatatggctttgttttcatttcattgagctcatactgatttctgggacattgcgatgccccatacttttcgcctttcattataggagcaggtgtagcactgcatctgtacatgttgaatttcttcaacaccttttctatatatgtcttttgagaaagtcccaatgcatactttgttctatctcggtgaatctctatgcccaaaacatatgaagcctcaccgaggtctttcatgtcaaagtttgaggacaagaatttttttgtttcctgcagtagactgacatcactactagccagtagaatgtcatccacatacagaattaggaaaataaatctcccattcttaaactttgaataaatacagttgtcctcgacattctcttgaaacccaaatttttttattgtcccatcaaacttcaagtaccactgtctcgaagcttgctttaatccataaatggatctctttagacgacatcccatattttcgtttcctttcatgacaaaacctttcggttgcgccatgtatactttttcctccaaatctccatttagaaatgccgtttttacatccaactgatgtaattccaaatcataatgtgccactagtgccattataatcctgaaggaatctttacaagagactggagaaaatgtctcattgtaatcaatcccttctcgttgtgtgaagccttttgccacaagtcgcgctttaaacttttctatattccctctggagtcatatttggttttgtagacccatttacagcctactgttttggctcctttaggaatttcttctaaatcccaaacatcgtttagtttcattgatttcatttcatctttcatggcttccaaccattcagatgagcgagcgcttctcatggcctcttcatatgaggtgggatcatcctccatatgcgactcttctatattttaaactttatagtcatcacggatagccgatcttctgactctttcagaccttctaggggcctgcacatttggcacatcctgtacctgaggctcttgatgagtctcctgtactggcacattatctatttgaggctgttgtagctcctcctctggtgtggcaaccatttctgttgaatcctgtataacaggttcctcactctcattcattgttgccacaggaggggtaacaacaggtgttggtacctcaatgacaggcattgcaggcacaacatcagcaggtagagagaagaaaggttcctgagtcgacggagcgggtacagacacccgcctctcctcaagatcaatttctcgaactaccgagctccccctaatcatttcgtcttccaagaagacggcgtgtctcgtttctacaaactttgtataactgtttggacagtagaaacgatagccttttgatctttcaggatagccaataaaatggcagctgactgttttggggtccaacttcccaatatttgggttaaatactttggcctctgtaggactcccccacacacggaggtgagttagcgagggtactcttcctatccatagctcatacggtgttttgggcaccgatttgcttggaactctgttgagaatatgaatggcggtttttaacgcctccatccataaaccgagtggtagtgtggagtagctcattatgctgcgcaccatatccataagggtacggttgcgcctttcagctaccccattctgttgaggttcgcccggtgttgaatactgggctactattccattctctagcaagaaccttgcaaaaggtccagggacttgcccataaggcgtatgtcgaccatagtactcccccccacggttagatcttactactttaatctttatatcatgctgattttcaacttcagctttgaatatcttaaatttatccagtgcttctgatcgctctttaattggataaatataaccatagcgggagtaatcatctgtgaatgttatgaacgagtcatagccatccacacttttcacaggaaatggaccacaaatatctgtatgaatgatctctaaaattcctgcgcttcgttttgcaccctttttgatgctctttacaaattttcctttaatgcattctatgcattgttctgagaaccccaatggaggaagaatttcattcttaactagtctctcaattctccccctcgaaatatggcccaaacgacagtgccataatttcgatgagacatcgggagttcactttcttttcttgttttcttttgtcaacgaggacacaacattcacattctcagaaagagataacaaataaagctcgtctcgcaacacagcaagaccaatacatgcattattatgccatagttcacatttgccacttccaaagcggcaatcatatccatcaaaatccaactttgatacacttattaagtttctttgcaaagaaggaacataaaagacatctcgaagtaaaagtatgaagccattcgcgagctctagaggaagatctccaacagcttcaactttttcttcaactccattggcaactctaatggtgctttctcttctttgcgtagtcctcgtcgaacggaatgcctttaaacaattacaagcatgaatagttgctccagaatcaatccaccatgtggatctagagtaaccaacataatgagattcatttacaaatgtaataatgttctcacctttctttgccatgatcattttcaaaaagtcaggacaatctctcttgtagtgtcctgtcttcttgcagtggagacattgatctttctcaacagcgaactgttgttgctgaggcagatgctgagactgtttaccttttgaggtgggagacttgtggttttttttcttatctttaacatagtttattgaaccaccatttgattcgttgattctctcctcctcttgcacacaattagcaatgagcttctcaaagttccatttctctggacttatgttgtagttgacaataaaattgtcaaactgctttggcaatgaggccataaccagatggaccagaaagtcatctgttatgcccaaatccattggcttcaacttggaagccatgttgcttattctaagtatgtggtctctaacaccacctccatggtacctttctgtcacaagctgcttgatcagctgtgtagcataagtctttgaagagccagtaaactgactctttattctttcaaggtactctgagacagcgtcacactctgggatcgagcccaatatggtaggctcaatcgtattctttaccacagccaaacatttcttgttggctaaggaccatttcttttgttcaatgtcatacgacatgacgagaggagcattgtccctctgtctcttttgccagtcagcatctgactcattttcacctctgataagttcagcaagttctataggacatggggtagtcaacacccagtccacctctcccaagataaaagcaaggtcgagttttcttttccattctgcgtagttatctccttttagggtcggaatatctttaatgcaacccatcaaggagtagccacctgaaataatcatgtgcggtgagaacaaaattaacattaaaatagtatgcattaagcctacatcaccgttgggcagaattagacataacacatagccataactataacattgcaattatcaacgttggtcagaaaattacaacatcatagcacataattaatgttcctaaaattaaattctcccgttggttcgaaatttaattttagaaacactaattttcatcaatttcatctatttgcagcggaaaaactatataaaatttatatgaacagtagcaaaacactgtaatttactctctgcaaaattctcccgttggttcaaatttaaacagaggtaaaacatgcaaaaatctattcaaaattctattgaaatttgcatgaaaaatcgacaaaataaattggaaaaaatgctactgttctcttttctttgttttcggccccgagggacctcaaacagacttttcccggtcggcccgcggccttttggcacgggcgggcgccccccttccccaggccgcaacctgggcctgggccaggaaagcagccccccgcgcgcgccctcttgggccgatttcggcccggccggcgtcgaccgtccgatcagctagggtttcgatcggacggccgggcgccgagatcggaggatcaaaacccccctctcccggccggccgccgaaaaccctagcttctcttctcttctctctctcacgcgaccgcgtggacggcgtcgccatcgccggcgaccttcgcgcccgccgcgccatggccagcgccttttctcttctcttctccccccaccgtctctcgccctccacccgcgaaaagtgagagagagaacggcgacgacggagatggcggcgccgccgcgggccccctcgccggcgcgcgcgtgcaggtgtgcgcgcggccgtcgagtggctcctaggcggcgcctctttgcccctccctccctccgttgccggcgtcgacggcggccggcgacgaggtaagattagggttagggttttcggttcttttgatccgtgcggatcttgtgcttttctttctttggatttctttccccgaaacgatctaaacactagggttgctctgataccattgttagactttgctctaggatcacctaggttagatctagtcgggtggttctatttgggattgatgtttgaactatagagattgaaaacgggggagggtttagatagaccgaccggttgaggagttcgtggaggaagaggcgctggacatcgtcgttgtcgtcgcggcttgacgtggatgcgacgccggtgaggtcgacggcgatgacggctgcggcagtggtggtcgtagacgtcccggcgatgaggcgtggcgcggcggtggcgtttcccgtcactggctgcgccccctctcgatcggattagggttttgtggggtggagttggcggcggcggtgaacttcgtaccttgtgccgtgccggcctccacccctcttttatatggcgcagtgtgacgggggcccaccagccattgggctgggcgcccccgatcagggcgcggtcaaggcccccttgagccgttgggctcaaggggagggagatctatctaacaaagaaagccatgctaagcacagaactggcaagatgatagatatcttgcttatatatctgcttgatccatcgacgtcatctatgtaagtgagtgtttggcacccagtccatgtgttttctctattcgtataatatttaaatatcaaagattgtatatattcttttcacaccgtactgatctactttatcttctacttatgcttcatttgatctagctggatggctgtaactggatggctgagcttattcaggatacatgaaacgacacatatcattagtgcaagattaattaaatattgaatataataaagccaaaatagatttatttaatttttaaacttttatataaaatatattttaattatacacaagttgcttttaaatatatacgatgtaggttatggttgtcaatttaattatagtgcataaaatggttcagatggatttagatattattatcaaaagatatgtcttttgtaataattcctatatcaatgggtagataactgggaaaacaaggagtaaccaatctgataagtactctagaacttattgcttatttactaaaatgtttaatgtgtagtatataatatactttatgaataaaaaaatatcctaatatataatcatatgccaccacttatccataagtatataaatactatccactaatcgtcaagtcatattgcttacgaggtattcatgcatagtgcacctaataattagctaccatccaacgagcacttatgtcatgaagcaccatatataacggactatgctaagtggagaactatcaacaaatgataggtaaagtaaagcatgccaccaagccacagcaaataataatcgactacaagtatattgtcagtataagcaatagaatttctacacttctacaagaactcttaatatatcacgtaatagatctcataaactagaaaaaaagtataagaaaaaatataaaaaagaaaatatctggtcatcaatttacacttcaactggtagatccattattttcaaccattatattggatatattccagctaaaaaccaactaatctctccctacgtacgtacctatacaagagatgtcgaaaaggaaaaaaaaagaagaatgtatatatgatctgctccgtctggttgtttttttgtttctttctttgcagcactaaagttttcctcaaattatgcatatatatagtgaaactctttacgatgttatcgaaaaagtcatgccactgtggcatcgcttcatgccatcccacaaaacttttttaaaatatttttttaactaatgatctaaaacgaaatcatagacactcatataaatatgtgcacaaccatcctacgaatatgcgcagtactattcacaaaaaaaatacatacgtacaataaaaaatgtcgcatggaaacctattatatccttatataagtatgtcattctcatctaaatagtgttgacaaaattagcacaaataattttgacaatatgaattattccttcgaatattacccatgaatatacgtaggtgacttagatgtatagtaaaagaaaaaaatctaaacccatattaacctgtatgtttacgaaagatggtgatatgcgactttatgtatagccatgacaaagtgaaatttgtttgaatataatagatattatcaattagtatatcaaagtttataatttatttcacataataaatatttcttattttatattataaggtaatctatggttcttaaaataaatacggtaacatatggtttattttagtattctttctataaacaaaaaaataaattgcccgcgcatctgcgcgggcttcctttctagttgatcaaatggacaaatcagaatccagtatgcatgaaggccagaaaaatttgtaggaaaacacaaaaatgcatgaaggcggacaatataagaccaaaccattgtactcgataaaccggatttcctttcgtattctgggtagcaaacggcacaagctctcgccgtagcagatgacacaactggaagaaatcgcatgcatgagctttgttggatggccaatttccaaagcttcaggacaagatacagcagatctttcttcctcaagagtcctcagcaggagaggcaacaatgttatatcattctcacatgcttcctcaagaacataagaggaaattatctctattatgggcattgtttttttcccccaaaggaagtaattagacaagcttcactcttcacacaagttttgtgatgattcactactcaatattatccacgataatctgagtagtgacaagttattgttgtccggggatgacagtttgtggattgctacagagcttgcatgagctttgtattatctccattttgcaacaacaatatcagtttttcttttaaattttgcttgcatagggatctcaatttcaggacaacatctagatgatatttcgatcatttacctgagataatattgcaacctcatttgatgaattgattaaactatttttaccgtgatcttaagatttttcatagccttggtcagataagattccttcttacaatgtaagatgctctgctacctagaacacatgttggatcagagttatttgttgcgttctttagtttttccaaagaaaaaatctttgtgctatcactggcattttcatcttaagatattggtgattctagaagaaggcccttggtatttcttaaaatatttcttctttgcttttggatataccttctatacttgcagaaaaggaatacccccacacaaacgtagaagaaaaattccaaaggcaacacccagaccaattaatagcattacctacaaatagtgtttcccatatgtcttcccttttattttattttcttaattaggtctcttctaaaccgttattacaacactacttgaatggctggtgcaagattaaacttttgaacgttaccttttcctttcttaaagagtgcacaaaaattaccaataggatgaaagccagagttccaaaaggggaaaaaaataagaatctatacaaaagaatttcctgataaatgataattaatctttttctgtaaagtggtgagaatggaaaatgaagtccaatttgtatgtagttttgaaaaaagatccaaatgtatttagttttagcctgacttgtgaatcattcatattgcaaaatactcaaattacaaaattaaattcattggaagagaaaatcaagtacaacacgcattgtatggtcttggacgccacatatgtgctaatgtgcattatgttgtttttgtatttcatagctaatagtattcatagaatatgttaaactagaggtgcaaacaaccttgatcagctaaaaacatggctcattctaatctgtttaaccttagtagtacgtgaaatttaagagacggtggctaactgaattgttgttgcatgtgcaatacttttcaatggactcatttctactctttttataaccttactagtacatgtggcatcatgcaggcaaaagtgggtgcttaccgagcacaaagagcccatttgccacatgctttattagaatagaattgcaaggctagaatgtatttagaactccatgaaaaaatagggatgtatccctgaaagaaagtacagcgatatatagagtcaggggcgtaatagctctttctgcctcaggcaatagaggcatttgtcatcatcgtcgttgctccctcccaatgttgttacatcaaagaacaaggcaaccagatctggccacccctgaactcgtggcggccatatttgactacccctgggctcatcgcagctagatctgacgacctaacatcgacactggaccacactaggacaaagatttctgctagggctgcagtggaggaggtgagggcgaagcgatttccacagcggccacaaagaggtgggggaggaggtctccaccggcgcacacgggacccaaatgatggtggggacatggaggccggcgagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0372100, RefSeq:Os04g0372100