Os09g0570500

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Revision as of 07:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0570500| Description = The start codon is not identified.| Version = NM_001070522.1 GI:115480786 GeneID:4347914| Length = 2627 bp| Definit...")
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Gene Name

Os09g0570500

Description

The start codon is not identified.

Version

NM_001070522.1 GI:115480786 GeneID:4347914

Length

2627 bp

Definition

Oryza sativa Japonica Group Os09g0570500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23606599..23609225

Sequence Coding Region

23606600..23607261,23607349..23607655,23607897..23608062,23608526..23608628,23608766..23608883

Expression

GEO Profiles:Os09g0570500

Genome Context

<gbrowseImage1> name=NC_008402:23606599..23609225 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23606599..23609225 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>catcaacggacaaggctgaatattggtcttcagcaaattgaaggtacagcgacagtatctgaatctggaagcaatactcctagtattgctgaaggcctgtatgaacctcatagtcaagcagagagttggcaggatgatttggaacaagagagaagagattgggaacaattttcccatgctattactggagaggaatctgaaataaattggcatgaaaatacgtacaatggttcatctcatgagggtaccgaagttgaaggtggtcaagatgcacatattccagaatcacatgatgagttagctagtgacaatcttcctcctcaatctcatggagaacagcaggacaatagccatcttcccgaggagaatgaagagctgcatgacagtgatcttcaacaatctcgtggagagtggaatgagggcagtaatccatttattcctacagaagtacacaacgagtggcacagcgatgatcatttccaaggagtaaatgaagagtggcatgatgatgatgagtccaatgatactgcagataattggcatgatgacaactctgatcaaccaattgatcatgattctgctcttattagaagagctaatacgtttgtcccagctgatgatgataatgtgtacagtacagaactaagggaactcctaagcagaaggagtgtttctaatcttcttcatagtgcttttcgtgaaaatttggaccgacttatccggtcatatgttgaaaggcaaggtcgtgctcctctctcttgggatttggaaggagcacctcctgcgcctgactcacccgagcaaagccaggagcagcatagagatgaagaggaacaggagcttcatgataatgttgttaggcctcccttagtgattccacctccgcctatacctcctcgccagccactttggcattcggagttgcatcgtaataactggatcagacaaaacatacatcgctctgatattgaatgggaggctattaatgacttaagggctgatatggctaggcttcagcagggcatgagtcatatgcaaagaatgttggaagcttgtatggacatgcagctcgagttacagcgatctgtaaggcaggaagtttctgcagccttgaatcgcttcatcggggagcaaggtgaaagtaaagaaactatagacgatggatcaaaatggatccatgtgagaaaagggacgtgctgtatatgctgtgatactccgattgactctcttttgtacagatgtgggcacatgtgcacatgttcaaaatgcgcgaatgagttggttcgaagcggagggaaatgcccgctgtgccgtgcacccataattgaggtgatccgagcatacttcatcatgtag</cdnaseq>

Protein Sequence

<aaseq>HQRTRLNIGLQQIEGTATVSESGSNTPSIAEGLYEPHSQAESWQ DDLEQERRDWEQFSHAITGEESEINWHENTYNGSSHEGTEVEGGQDAHIPESHDELAS DNLPPQSHGEQQDNSHLPEENEELHDSDLQQSRGEWNEGSNPFIPTEVHNEWHSDDHF QGVNEEWHDDDESNDTADNWHDDNSDQPIDHDSALIRRANTFVPADDDNVYSTELREL LSRRSVSNLLHSAFRENLDRLIRSYVERQGRAPLSWDLEGAPPAPDSPEQSQEQHRDE EEQELHDNVVRPPLVIPPPPIPPRQPLWHSELHRNNWIRQNIHRSDIEWEAINDLRAD MARLQQGMSHMQRMLEACMDMQLELQRSVRQEVSAALNRFIGEQGESKETIDDGSKWI HVRKGTCCICCDTPIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPIIEVIRAYFI M</aaseq>

Gene Sequence

<dnaseqindica>2..663#751..1057#1299..1464#1928..2030#2168..2285#acatcaacggacaaggctgaatattggtcttcagcaaattgaaggtacagcgacagtatctgaatctggaagcaatactcctagtattgctgaaggcctgtatgaacctcatagtcaagcagagagttggcaggatgatttggaacaagagagaagagattgggaacaattttcccatgctattactggagaggaatctgaaataaattggcatgaaaatacgtacaatggttcatctcatgagggtaccgaagttgaaggtggtcaagatgcacatattccagaatcacatgatgagttagctagtgacaatcttcctcctcaatctcatggagaacagcaggacaatagccatcttcccgaggagaatgaagagctgcatgacagtgatcttcaacaatctcgtggagagtggaatgagggcagtaatccatttattcctacagaagtacacaacgagtggcacagcgatgatcatttccaaggagtaaatgaagagtggcatgatgatgatgagtccaatgatactgcagataattggcatgatgacaactctgatcaaccaattgatcatgattctgctcttattagaagagctaatacgtttgtcccagctgatgatgataatgtgtacagtacagaactaagggaactcctaagcaggtttttttatttctttcatgaagaaagtctctgcaacatatttctttagttctcagcgtaaatactgaattagtgttcattctgcagaaggagtgtttctaatcttcttcatagtgcttttcgtgaaaatttggaccgacttatccggtcatatgttgaaaggcaaggtcgtgctcctctctcttgggatttggaaggagcacctcctgcgcctgactcacccgagcaaagccaggagcagcatagagatgaagaggaacaggagcttcatgataatgttgttaggcctcccttagtgattccacctccgcctatacctcctcgccagccactttggcattcggagttgcatcgtaataactggatcagacaaaacatacatcgctctgatattgtaagttattacctatgttattcttgtcacatgtgtgagcttttcatcttcctcagttcgttccaagtgcacaatttctttttttctgaatggccaagccaacatgccatttttaattgagacttgcacttttttttaaaattaggttgccacattcagcctctctatcctccatgcatagtgcactgttgcttctatatttgttgttaaaggctcattttcttttggtttgtatttgcaggaatgggaggctattaatgacttaagggctgatatggctaggcttcagcagggcatgagtcatatgcaaagaatgttggaagcttgtatggacatgcagctcgagttacagcgatctgtaaggcaggaagtttctgcagccttgaatcgcttcatcggggagcaaggttagtaactcatctggaaagtactcatctattaacaacactaacaaaacaaaatttagcattgaaattaatctttgattatcccttggtgtatcactttgatgcatagtatatttatatgatacgtggatgttgtttcttcgtcatagtgcttacactgtcaaggttgcgaggcgcgccttacaattcaaattgtcacttagctaagataataaggttcctcaagaacgaatgctattatactccttccagtcaataacatgtcaagtcctgggagatgtgcggtcaagctatgttaattttgacctaagttgttatctagctaggtagtttggatctatcatggaacgataaatttggtatacaataaactttcatcatatgcagttttgtaacgcctgatgcttagatgcttgtcgcattggctcagacttgtacctaagctttgtatttggtatctcaggtgaaagtaaagaaactatagacgatggatcaaaatggatccatgtgagaaaagggacgtgctgtatatgctgtgatactccgattgactctcttttgtacaggtttgaactcatgcttttcttctgaaataatgaataataggtccatgtagtttgttcttctctaatacagtataacagtactaatgatggtttgttttgcctctttgttgggggttggggtgttgactttctatcagatgtgggcacatgtgcacatgttcaaaatgcgcgaatgagttggttcgaagcggagggaaatgcccgctgtgccgtgcacccataattgaggtgatccgagcatacttcatcatgtagatacagagagaaaggaagataaagaagaagaaatgtttttttcttttctttttcctacttagagcttgtaggtgttagtggatgtatgattatattcaattttagctatgccctatgcctgtgttgtcttgtgtgtctcttgtctctgatgagttccattgttttgttagattggggccctgcttgtctgccttggtgtaatatatggttttggggtggcagaaagtgttttgtttgggaactgggattaccggaggcagctactaattcatttcacaactgatcatttgaacaaactgattgatgggatacagtaagagggaactaatgttcctgtctagt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0570500, RefSeq:Os09g0570500