Os04g0375300

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Revision as of 11:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0375300| Description = Disease resistance protein family protein| Version = NM_001059111.1 GI:115457951 GeneID:4335605| Length = 3821 bp| ...")
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Gene Name

Os04g0375300

Description

Disease resistance protein family protein

Version

NM_001059111.1 GI:115457951 GeneID:4335605

Length

3821 bp

Definition

Oryza sativa Japonica Group Os04g0375300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18339619..18343439

Sequence Coding Region

18339619..18342781,18343372..18343439

Expression

GEO Profiles:Os04g0375300

Genome Context

<gbrowseImage1> name=NC_008397:18339619..18343439 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18339619..18343439 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgacatcgttggaatattgaagggagcagctggtcttgctgccgatgccaatgccttccgtgagttcttcaactgggccgcaccacgtgtcttggctgccgtacgttctcagcagcagcagcatctgctgcaagtggatccaggaggggtaggatcagcatcagctagagacaacagaacagctccactgcaccagattgaggatgatcttcagaatctcgagaacgacctatggctgatccaatcaactacatccacaatgtatgacctcatcgatcgtcttgaatggcatagccacaaggatacagaagactggcatcttcgccagatcaaggatgtagcgtacgatgccgaggacctccttgatgagtacaattactatgctctcaaggtgaaggtggacacgagcaagaacttggggcaagatcactcgcatgaaccctttttggagttcctgaacagtgtcaacttcagtaaagtaatgaaaatcaaaaatagactaaagcaggtttttgaccaatccaagggtttaggctttcacaaaacaccaaagaagtttgatcgattagtcagaccagagacatgccgtgtcctagacgagccagatgagatatttggtcgtgaaaaagaactgaaggagttgaagcaaaacctaggagtacgtggacgcaagagaggcagacctgtggcatgcagcactacagctgaagcaaggaggacagagttgcctgtgctgccaatagttggtatgggcggcatcgggaagaccaccatggcacaacaaatctgtgaggatagagtggtgcggaatcacttcgactgcatactctggatatgtgtctcggatgaattcgaggtaaacaggttaacaagagatgttctgaagtctcttggagtaaagtcacaagattctgatacaagggatactcttatggttaatttacgtgatagtgtcaagtcaaagaagtttttactcgtccttgatgacatgtgggatgatgtcttaaaagatgagagaggatggagaacatttcatagaactttaagcaatggtcttcagggcagtatgattttggtcaccactagatcttccaaagttgctaacctagtcagcaacagtgatccctatgagctcaacggactgcaaaatgatgttttctgggatttcttcaaactatgcgcattcggatccaacagctctcgcaatagcccagagctggagcacattcgtccagagttggagcgcattggtagagctatacttcccaagttgaagggttcacctttggctgccaaaactcttggacgcttgttgaaaagtaacttaagtgtagagcactgggaggacatattgagaagtgaattgtggaaattggaacaagaggagactgacattttgccagcccttcgactgagttacgtttacctaccacgacacatgaaaagatgcttctcaatatgtgccctgtatccaaaggatcataaatttgacaaggagtttttagcagacatttgggtagcacaagggtatgtggaggctgaagatgcatcatcttgctttaatgaccttgtaaatcggtcattctttcagaaagcagctggctatagtgatatgtacgtaattcatgacttgatacatgatactgcacagctagtctccaaggatgagtgcttcatcatacaacatgtgagtgacctagctaaaatcccatcaaaggttcgccatctgtcaatattcaccaagggaaatatcagctgtacagaaatagtgactatttgcacacaaaataaaaaactgcggtccctaatatgcaatgaatcttaccgaagtattaaacaattcgctcccgtgattgattgttggttcaaggaactcccgagtatccgtgtattgatttttaaattttcaacggtgagaaagttacctgagagcataggcaactcaaaacatttgcgttaccttggtttattgggaagttctactttcgagacccttccttcatctgttagttgcctgtatcatgtccagactataaatgccaagggttgtgttttcaaaagataccctcaaggtttcagtgatctgatttccttaaacaaaattgaatcaaagggcttccaatttaacaaggttaaagataagcaattcctagaatggtccacaacggaaatagctgatgaacaattacagatgacagaggagcagattgaattgttacctcattggaatcttgagcatttgataataaagaattacctaggtcaatcttgccccagctggctccagccagactgcctgaaagtgctgacttcacttgaactttatgggtgcaggaacattcagagcctatcattctttgacccactcttttctgatttagaagagtcaaacagcatttatcaccttgaggtgttggatgtccaccagtgtcctaacattgattggcaaggtttggtggctttaccctcttctcttagaagggttacccttggcaactttggccattcgacagatcactttgtgagttgctttcgtggcctctccctcctgacacatctggaaatacattgctggttcttaacatctattcccctgcaagtttggatgagtaatcttccatccttggagaatttgcgtattgataattgtggctccctcacatccatctgtgtctctgaggcaagcaacatacacactgttggagtattttcatccctttcaacagtcaccatttcgttttgcaatgcactgttgagtcttgatgagttctttatgcccgcttatatgcctttcgtgaagaccattgatgtgttattttgcaaggaattagcattactgccagttcatgagctccaccttttttctcgcttggagaagctatgtattagaaactgtcccaagttgaatatgcagaggagaatgacattaccatcctctcttcggatgctcagcttattactttgtccaagcatagagtacatcgacaacagccatctggcgagtgcaatgaaactcaagggacttagccttcaacttatgaggtgtccagacctcatctctattgttggtgctatatctgtctctgaaatagtgcagggtcgtatagaagattgccccaagctgatggagataacacaaccttttaaggtcatgactgagagccaaaagaaagtgcagcctgatcagaccatgggtaggctaggagatgagaatctcaagaactga</cdnaseq>

Protein Sequence

<aaseq>MDDIVGILKGAAGLAADANAFREFFNWAAPRVLAAVRSQQQQHL LQVDPGGVGSASARDNRTAPLHQIEDDLQNLENDLWLIQSTTSTMYDLIDRLEWHSHK DTEDWHLRQIKDVAYDAEDLLDEYNYYALKVKVDTSKNLGQDHSHEPFLEFLNSVNFS KVMKIKNRLKQVFDQSKGLGFHKTPKKFDRLVRPETCRVLDEPDEIFGREKELKELKQ NLGVRGRKRGRPVACSTTAEARRTELPVLPIVGMGGIGKTTMAQQICEDRVVRNHFDC ILWICVSDEFEVNRLTRDVLKSLGVKSQDSDTRDTLMVNLRDSVKSKKFLLVLDDMWD DVLKDERGWRTFHRTLSNGLQGSMILVTTRSSKVANLVSNSDPYELNGLQNDVFWDFF KLCAFGSNSSRNSPELEHIRPELERIGRAILPKLKGSPLAAKTLGRLLKSNLSVEHWE DILRSELWKLEQEETDILPALRLSYVYLPRHMKRCFSICALYPKDHKFDKEFLADIWV AQGYVEAEDASSCFNDLVNRSFFQKAAGYSDMYVIHDLIHDTAQLVSKDECFIIQHVS DLAKIPSKVRHLSIFTKGNISCTEIVTICTQNKKLRSLICNESYRSIKQFAPVIDCWF KELPSIRVLIFKFSTVRKLPESIGNSKHLRYLGLLGSSTFETLPSSVSCLYHVQTINA KGCVFKRYPQGFSDLISLNKIESKGFQFNKVKDKQFLEWSTTEIADEQLQMTEEQIEL LPHWNLEHLIIKNYLGQSCPSWLQPDCLKVLTSLELYGCRNIQSLSFFDPLFSDLEES NSIYHLEVLDVHQCPNIDWQGLVALPSSLRRVTLGNFGHSTDHFVSCFRGLSLLTHLE IHCWFLTSIPLQVWMSNLPSLENLRIDNCGSLTSICVSEASNIHTVGVFSSLSTVTIS FCNALLSLDEFFMPAYMPFVKTIDVLFCKELALLPVHELHLFSRLEKLCIRNCPKLNM QRRMTLPSSLRMLSLLLCPSIEYIDNSHLASAMKLKGLSLQLMRCPDLISIVGAISVS EIVQGRIEDCPKLMEITQPFKVMTESQKKVQPDQTMGRLGDENLKN</aaseq>

Gene Sequence

<dnaseqindica>1..3163#3754..3821#atggacgacatcgttggaatattgaagggagcagctggtcttgctgccgatgccaatgccttccgtgagttcttcaactgggccgcaccacgtgtcttggctgccgtacgttctcagcagcagcagcatctgctgcaagtggatccaggaggggtaggatcagcatcagctagagacaacagaacagctccactgcaccagattgaggatgatcttcagaatctcgagaacgacctatggctgatccaatcaactacatccacaatgtatgacctcatcgatcgtcttgaatggcatagccacaaggatacagaagactggcatcttcgccagatcaaggatgtagcgtacgatgccgaggacctccttgatgagtacaattactatgctctcaaggtgaaggtggacacgagcaagaacttggggcaagatcactcgcatgaaccctttttggagttcctgaacagtgtcaacttcagtaaagtaatgaaaatcaaaaatagactaaagcaggtttttgaccaatccaagggtttaggctttcacaaaacaccaaagaagtttgatcgattagtcagaccagagacatgccgtgtcctagacgagccagatgagatatttggtcgtgaaaaagaactgaaggagttgaagcaaaacctaggagtacgtggacgcaagagaggcagacctgtggcatgcagcactacagctgaagcaaggaggacagagttgcctgtgctgccaatagttggtatgggcggcatcgggaagaccaccatggcacaacaaatctgtgaggatagagtggtgcggaatcacttcgactgcatactctggatatgtgtctcggatgaattcgaggtaaacaggttaacaagagatgttctgaagtctcttggagtaaagtcacaagattctgatacaagggatactcttatggttaatttacgtgatagtgtcaagtcaaagaagtttttactcgtccttgatgacatgtgggatgatgtcttaaaagatgagagaggatggagaacatttcatagaactttaagcaatggtcttcagggcagtatgattttggtcaccactagatcttccaaagttgctaacctagtcagcaacagtgatccctatgagctcaacggactgcaaaatgatgttttctgggatttcttcaaactatgcgcattcggatccaacagctctcgcaatagcccagagctggagcacattcgtccagagttggagcgcattggtagagctatacttcccaagttgaagggttcacctttggctgccaaaactcttggacgcttgttgaaaagtaacttaagtgtagagcactgggaggacatattgagaagtgaattgtggaaattggaacaagaggagactgacattttgccagcccttcgactgagttacgtttacctaccacgacacatgaaaagatgcttctcaatatgtgccctgtatccaaaggatcataaatttgacaaggagtttttagcagacatttgggtagcacaagggtatgtggaggctgaagatgcatcatcttgctttaatgaccttgtaaatcggtcattctttcagaaagcagctggctatagtgatatgtacgtaattcatgacttgatacatgatactgcacagctagtctccaaggatgagtgcttcatcatacaacatgtgagtgacctagctaaaatcccatcaaaggttcgccatctgtcaatattcaccaagggaaatatcagctgtacagaaatagtgactatttgcacacaaaataaaaaactgcggtccctaatatgcaatgaatcttaccgaagtattaaacaattcgctcccgtgattgattgttggttcaaggaactcccgagtatccgtgtattgatttttaaattttcaacggtgagaaagttacctgagagcataggcaactcaaaacatttgcgttaccttggtttattgggaagttctactttcgagacccttccttcatctgttagttgcctgtatcatgtccagactataaatgccaagggttgtgttttcaaaagataccctcaaggtttcagtgatctgatttccttaaacaaaattgaatcaaagggcttccaatttaacaaggttaaagataagcaattcctagaatggtccacaacggaaatagctgatgaacaattacagatgacagaggagcagattgaattgttacctcattggaatcttgagcatttgataataaagaattacctaggtcaatcttgccccagctggctccagccagactgcctgaaagtgctgacttcacttgaactttatgggtgcaggaacattcagagcctatcattctttgacccactcttttctgatttagaagagtcaaacagcatttatcaccttgaggtgttggatgtccaccagtgtcctaacattgattggcaaggtttggtggctttaccctcttctcttagaagggttacccttggcaactttggccattcgacagatcactttgtgagttgctttcgtggcctctccctcctgacacatctggaaatacattgctggttcttaacatctattcccctgcaagtttggatgagtaatcttccatccttggagaatttgcgtattgataattgtggctccctcacatccatctgtgtctctgaggcaagcaacatacacactgttggagtattttcatccctttcaacagtcaccatttcgttttgcaatgcactgttgagtcttgatgagttctttatgcccgcttatatgcctttcgtgaagaccattgatgtgttattttgcaaggaattagcattactgccagttcatgagctccaccttttttctcgcttggagaagctatgtattagaaactgtcccaagttgaatatgcagaggagaatgacattaccatcctctcttcggatgctcagcttattactttgtccaagcatagagtacatcgacaacagccatctggcgagtgcaatgaaactcaagggacttagccttcaacttatgaggtgtccagacctcatctctattgttggtgctatatctgtctctgaaatagtgcagggtcgtatagaagattgccccaagctgatggagataacacaaccttttaaggtcatgactggtacgtcctacggaataactcttttttttttttgttaaaacttaaaactggtaattccccgcttagagtaatctcattaaattttttgattttttttgtgttcttattaagttcacagaaaattgtcatgatagaattgctctgcttccatgtcataaattatgttatacttatttgtaatatttagtttcgtgtgaatttcatgattggtaatacaattaaccgtattttcatcaactatggcaaacggactgatttccattggctgtcaagtacacaataagccgatactagcttttccaagactcaacttttataatactatgccatagaatacttatttgtttagatttagttatgttgtaggaaaagaaagatgaaacgaagtacgaaatgtattgtttatattcattggatttgatagttcattggcatcgacgtgcaggccataaataatgatgagcgttcaagatgatttcagatgcaaacagcacagaacatgccaacgtaagttatgttggggatcagggagaatcatctctcagaatatatatctggtaatatactgtgttattgtgtattggatcgagagagccaaaagaaagtgcagcctgatcagaccatgggtaggctaggagatgagaatctcaagaactga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0375300, RefSeq:Os04g0375300