Os04g0376200

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Revision as of 11:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0376200| Description = Conserved hypothetical protein| Version = NM_001186971.1 GI:297723072 GeneID:9272498| Length = 2384 bp| Definition ...")
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Gene Name

Os04g0376200

Description

Conserved hypothetical protein

Version

NM_001186971.1 GI:297723072 GeneID:9272498

Length

2384 bp

Definition

Oryza sativa Japonica Group Os04g0376200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18398894..18401277

Sequence Coding Region

18398894..18399062,18399303..18399337,18399799..18401277

Expression

GEO Profiles:Os04g0376200

Genome Context

<gbrowseImage1> name=NC_008397:18398894..18401277 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18398894..18401277 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcgcgttcctcgatggcatcgctgggatcttagatgcgcccagtactagcggtgctcatcatcggcacaccaaggcactctaccttgagttcttccgcatctacaacaacgctgatatcattgaccagatgattgagatcaccgttggagagtggggtgtcgaagatgatgtgttagtattgttttgccatgtttggcagctgcttcccaccgtcatccaaactaaaaatctttctgccacgcctaggattaaggcgccccgccgccgggcgcgcctcccgcgccgcctcccggcgctcaggttctccgtcgccgacgtgctctcgccgcgctacttccactccaccgaccgcctccgccgagccagggcgcgcggcgccgccgacgccgaggacgtcgagggcaggctgctgccgtacatcaaacgcctggaccggcgcgccacgcgcgcgttcctcgacggcctcgccggggtcctggacgcgcccggcgctcgccgccggcgcgccaggtcgctctacctcgagttcttccgcacctacgacggcgccggcaccatcgaccggatgatcgacaccgccgtcggggagtggggcgtcgagcacctcgacgtcgtcgtcctcaggtccgcgccgcgcgaccccccgctgccggtgtacgccttcccggaccacctcctcgacgacgagcgccaccgctcgcgcctccgcagcctgacgctgggccactgcgcgctgccgccactgcaccggtacgccgcgctggagcggctcgtcctgcaggacacggcggcgtccaccccgatgtccgcgtacgacgccgtgttcggtgggtgccgccgcctgcgggtggtgcacctcctgtgctgccgcggcgcgggcgacgccctggtaatcgacgcgccgcgctccggcgtggaggagctcgtcgtggacagctgctcgttccgggctgtcgagctgcgcggcctccccgagctccgccgcctcgcgtgcctcggcgacggcaccgtgccggtggtggagctcagcttcggcgccgtcccgcgcctcacgcacgtcaacctcacgttcgccgcccccacgtccccggcgacgccgccccaccaccgcgtcctcgactccctcctcgggggcgcgccgccggcgtcgatgtcgaggctcgccgtccgcttcaccgggccgaagcggtggatcctcccgcgcccgctcggcgccgcgctgctcggcctgagggagctcctcgtcgccgacgtgccgcccacctgggacgtctcgtggccgcgcctcctcctcgaggcggcgccggcgctcgagtcgctgcacatccacgtctccgcgcccgccccctcgccggacgaacacctggggcggccgatctactggcagccgcggcgcaagttccggcaccggcggctgagggaggtgcgcatggtggggttcgcggcgagcgcgccgcggcatacgcggttcctgaggtacctggtgcgggtgtgcgcgacattggagcgcgtggtgctcgtccgggacgggcgcgtcgaggaagacgggctctgggggtggaacacggtgagcaatggcgatcggccgtggaggctggacgattggatctcggtcagtgcgcagattaagcatggtagaacttggtcgaagcctcatgttgaggtgattttgaaatag</cdnaseq>

Protein Sequence

<aaseq>MCAFLDGIAGILDAPSTSGAHHRHTKALYLEFFRIYNNADIIDQ MIEITVGEWGVEDDVLVLFCHVWQLLPTVIQTKNLSATPRIKAPRRRARLPRRLPALR FSVADVLSPRYFHSTDRLRRARARGAADAEDVEGRLLPYIKRLDRRATRAFLDGLAGV LDAPGARRRRARSLYLEFFRTYDGAGTIDRMIDTAVGEWGVEHLDVVVLRSAPRDPPL PVYAFPDHLLDDERHRSRLRSLTLGHCALPPLHRYAALERLVLQDTAASTPMSAYDAV FGGCRRLRVVHLLCCRGAGDALVIDAPRSGVEELVVDSCSFRAVELRGLPELRRLACL GDGTVPVVELSFGAVPRLTHVNLTFAAPTSPATPPHHRVLDSLLGGAPPASMSRLAVR FTGPKRWILPRPLGAALLGLRELLVADVPPTWDVSWPRLLLEAAPALESLHIHVSAPA PSPDEHLGRPIYWQPRRKFRHRRLREVRMVGFAASAPRHTRFLRYLVRVCATLERVVL VRDGRVEEDGLWGWNTVSNGDRPWRLDDWISVSAQIKHGRTWSKPHVEVILK</aaseq>

Gene Sequence

<dnaseqindica>1..169#410..444#906..2384#atgtgcgcgttcctcgatggcatcgctgggatcttagatgcgcccagtactagcggtgctcatcatcggcacaccaaggcactctaccttgagttcttccgcatctacaacaacgctgatatcattgaccagatgattgagatcaccgttggagagtggggtgtcgaaggtacagccttctagtcgatgcattgcgctgtttttagaaaccgaattatctcctccaaatccgcatcgaatccattgttttcttcgtacatcttatcaaattttgttgttaacaaccaacaagtttgcgattttttgatttttctaaaacatttttaaatttttaattgtaaaaataaatctttcttggccacgtcggttttgctgttgtggcataataaaactatcacgcccactacagatgatgtgttagtattgttttgccatgtttggcaggtcaaaagatctaggttttaaaaataagttttagaagagtttatttttaaaattaaaaattgaaagtttcaaaaaaaaaaaaccagttcatagacattatctattcatcaactatcatatcagcggaatcaagcagctctgctcaacagtaaccatcgtttgggctgtgtttttttctcccttttctcaacttctatttttttatattttgcgcgtatgtttcttaaactatattttacacaacttttttaataaaaaagttcatataaaaatcatattaatctatttttaaagtttatttagctaatgatacgctaaactatcgctctgttttcggtacctcaccttacagcacgtcaacaagagcagcaagcgtgttaggatagggatcggagtcggaatcggaatgcgatggtgactcgccgagccgcctatattatctctgcgacctgtgtacgtagctgcttcccaccgtcatccaaactaaaaatctttctgccacgcctaggattaaggcgccccgccgccgggcgcgcctcccgcgccgcctcccggcgctcaggttctccgtcgccgacgtgctctcgccgcgctacttccactccaccgaccgcctccgccgagccagggcgcgcggcgccgccgacgccgaggacgtcgagggcaggctgctgccgtacatcaaacgcctggaccggcgcgccacgcgcgcgttcctcgacggcctcgccggggtcctggacgcgcccggcgctcgccgccggcgcgccaggtcgctctacctcgagttcttccgcacctacgacggcgccggcaccatcgaccggatgatcgacaccgccgtcggggagtggggcgtcgagcacctcgacgtcgtcgtcctcaggtccgcgccgcgcgaccccccgctgccggtgtacgccttcccggaccacctcctcgacgacgagcgccaccgctcgcgcctccgcagcctgacgctgggccactgcgcgctgccgccactgcaccggtacgccgcgctggagcggctcgtcctgcaggacacggcggcgtccaccccgatgtccgcgtacgacgccgtgttcggtgggtgccgccgcctgcgggtggtgcacctcctgtgctgccgcggcgcgggcgacgccctggtaatcgacgcgccgcgctccggcgtggaggagctcgtcgtggacagctgctcgttccgggctgtcgagctgcgcggcctccccgagctccgccgcctcgcgtgcctcggcgacggcaccgtgccggtggtggagctcagcttcggcgccgtcccgcgcctcacgcacgtcaacctcacgttcgccgcccccacgtccccggcgacgccgccccaccaccgcgtcctcgactccctcctcgggggcgcgccgccggcgtcgatgtcgaggctcgccgtccgcttcaccgggccgaagcggtggatcctcccgcgcccgctcggcgccgcgctgctcggcctgagggagctcctcgtcgccgacgtgccgcccacctgggacgtctcgtggccgcgcctcctcctcgaggcggcgccggcgctcgagtcgctgcacatccacgtctccgcgcccgccccctcgccggacgaacacctggggcggccgatctactggcagccgcggcgcaagttccggcaccggcggctgagggaggtgcgcatggtggggttcgcggcgagcgcgccgcggcatacgcggttcctgaggtacctggtgcgggtgtgcgcgacattggagcgcgtggtgctcgtccgggacgggcgcgtcgaggaagacgggctctgggggtggaacacggtgagcaatggcgatcggccgtggaggctggacgattggatctcggtcagtgcgcagattaagcatggtagaacttggtcgaagcctcatgttgaggtgattttgaaatag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0376200, RefSeq:Os04g0376200