Os04g0376400

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Revision as of 11:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0376400| Description = Glycoside hydrolase, family 18 protein| Version = NM_001059116.1 GI:115457961 GeneID:4335610| Length = 1524 bp| Def...")
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Gene Name

Os04g0376400

Description

Glycoside hydrolase, family 18 protein

Version

NM_001059116.1 GI:115457961 GeneID:4335610

Length

1524 bp

Definition

Oryza sativa Japonica Group Os04g0376400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18413788..18415311

Sequence Coding Region

18413788..18414032,18414117..18415311

Expression

GEO Profiles:Os04g0376400

Genome Context

<gbrowseImage1> name=NC_008397:18413788..18415311 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18413788..18415311 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacaagaacggcctcctcctcctttccaccattgctgccgtcactctctcctccctctcgctcgcggcggtagcctcgccggcgacccgtaggagccaagaatcgcgggaggcggtgcgggccgggtactacctcgccgccgacgcccacctccggccgctcgccgcgctcgacgcgtcgatgtacacgcacctctactactacgccgtggcggtccaccccgcgcgccgcacgctgctgctgccgccggacccggcggcggcgagcctactgggggatttctccagggcggtcaaggccaagaacgccgccgtcaagaccgtcctctccatcggccgcggcggcggcgcgggtggtgcggctgcggtggcggggtcggggtcggaccccgcgttcgccgccatggccgccgacccggcgtcgcgcgcggcgttcatcggggcggcggtcaaggtcgcgagggagaatgggttcgatgggctcgacgtggcgtggcggttcccggcgtcggcggtggagatggcggagttcgggttcctcgtcgccgagtggcgcgccgcggtgccccgcgggttcctgctcacggccacggtgtacttttccaaccacgtgttcgacgcgccgttcgccggcgtggactacccgtcggagaccgtcgcgaggagcctcgactgggtgaacgtgatggcgttcgggctccgcccgcccggcgccgccaacgccaacgccacggcgttcgacgcgccgctctacgacagggcgtcgcactactcggcgagctacggcgtcgtgtcgtggctcgacgcgggcgtcccggcgagcaaggtggtgatggggatcccgctctacggccgctcctggttcctccgcaacaaggcgaacagcggcgtcggcgcgccggtggtcgccgcggggccgaagcagcggggcagcaacgccacgggcgccatgtcctacgccgaggtccagtggctcgccgcgacggcgacgcgcggctcccgcgcggtgatcaccgcctacgacaacgcctccgtcgcgtcgtacgtgtccgtcggcgacgtctgggtcgcgttcgacggcgtggccgtcgtcgccgagaagctcgccttcgccgcgcggtgcggcctcctcggctacttcctctggccggtcaactacgacgatgccaacctcaccgtgtcgcggcgagcatcacaagtctggacacagaccaaaatctcgccggagttcaagaacgtcaccggtggcgcccggcagacgcaggcgccggtgcagcggccgccggcgctccagtcgcctgcgccgaccaccgcgccgatgtcgtcgtcgtcgacgacgtcgtcgttctcacggttatcttggagaatgctggatgtgcgtctccatctgggtgctcttcttcttctcctccttctcgtgtgctaccaaatctag</cdnaseq>

Protein Sequence

<aaseq>MADKNGLLLLSTIAAVTLSSLSLAAVASPATRRSQESREAVRAG YYLAADAHLRPLAALDASMYTHLYYYAVAVHPARRTLLLPPDPAAASLLGDFSRAVKA KNAAVKTVLSIGRGGGAGGAAAVAGSGSDPAFAAMAADPASRAAFIGAAVKVARENGF DGLDVAWRFPASAVEMAEFGFLVAEWRAAVPRGFLLTATVYFSNHVFDAPFAGVDYPS ETVARSLDWVNVMAFGLRPPGAANANATAFDAPLYDRASHYSASYGVVSWLDAGVPAS KVVMGIPLYGRSWFLRNKANSGVGAPVVAAGPKQRGSNATGAMSYAEVQWLAATATRG SRAVITAYDNASVASYVSVGDVWVAFDGVAVVAEKLAFAARCGLLGYFLWPVNYDDAN LTVSRRASQVWTQTKISPEFKNVTGGARQTQAPVQRPPALQSPAPTTAPMSSSSTTSS FSRLSWRMLDVRLHLGALLLLLLLVCYQI</aaseq>

Gene Sequence

<dnaseqindica>1280..1524#1..1195#atggcggacaagaacggcctcctcctcctttccaccattgctgccgtcactctctcctccctctcgctcgcggcggtagcctcgccggcgacccgtaggagccaagaatcgcgggaggcggtgcgggccgggtactacctcgccgccgacgcccacctccggccgctcgccgcgctcgacgcgtcgatgtacacgcacctctactactacgccgtggcggtccaccccgcgcgccgcacgctgctgctgccgccggacccggcggcggcgagcctactgggggatttctccagggcggtcaaggccaagaacgccgccgtcaagaccgtcctctccatcggccgcggcggcggcgcgggtggtgcggctgcggtggcggggtcggggtcggaccccgcgttcgccgccatggccgccgacccggcgtcgcgcgcggcgttcatcggggcggcggtcaaggtcgcgagggagaatgggttcgatgggctcgacgtggcgtggcggttcccggcgtcggcggtggagatggcggagttcgggttcctcgtcgccgagtggcgcgccgcggtgccccgcgggttcctgctcacggccacggtgtacttttccaaccacgtgttcgacgcgccgttcgccggcgtggactacccgtcggagaccgtcgcgaggagcctcgactgggtgaacgtgatggcgttcgggctccgcccgcccggcgccgccaacgccaacgccacggcgttcgacgcgccgctctacgacagggcgtcgcactactcggcgagctacggcgtcgtgtcgtggctcgacgcgggcgtcccggcgagcaaggtggtgatggggatcccgctctacggccgctcctggttcctccgcaacaaggcgaacagcggcgtcggcgcgccggtggtcgccgcggggccgaagcagcggggcagcaacgccacgggcgccatgtcctacgccgaggtccagtggctcgccgcgacggcgacgcgcggctcccgcgcggtgatcaccgcctacgacaacgcctccgtcgcgtcgtacgtgtccgtcggcgacgtctgggtcgcgttcgacggcgtggccgtcgtcgccgagaagctcgccttcgccgcgcggtgcggcctcctcggctacttcctctggccggtcaactacgacgatgccaacctcaccgtgtcgcggcgaggtcagccatgctccaagctttttcactgacactgttccattgcccgctgccgttgctgacactgacctcctcatcttcttgcagcatcacaagtctggacacagaccaaaatctcgccggagttcaagaacgtcaccggtggcgcccggcagacgcaggcgccggtgcagcggccgccggcgctccagtcgcctgcgccgaccaccgcgccgatgtcgtcgtcgtcgacgacgtcgtcgttctcacggttatcttggagaatgctggatgtgcgtctccatctgggtgctcttcttcttctcctccttctcgtgtgctaccaaatctag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0376400, RefSeq:Os04g0376400