Os04g0379800

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Revision as of 11:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0379800| Description = Conserved hypothetical protein| Version = NM_001059128.1 GI:115457985 GeneID:4335626| Length = 4872 bp| Definition ...")
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Gene Name

Os04g0379800

Description

Conserved hypothetical protein

Version

NM_001059128.1 GI:115457985 GeneID:4335626

Length

4872 bp

Definition

Oryza sativa Japonica Group Os04g0379800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18575439..18580310

Sequence Coding Region

18575510..18575571,18575675..18575780,18575940..18576006,18576133..18576234,18576334..18576398
,18576801..18576899,18577335..18577402,18578348..18578561,18579013..18579068
,18579297..18579404,18579646..18579829,18579998..18580093

Expression

GEO Profiles:Os04g0379800

Genome Context

<gbrowseImage1> name=NC_008397:18575439..18580310 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18575439..18580310 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaaaccctagccgaggacgccgccgacgcgccgctcgacgcggcggccattcgaagccggttggagcggctcgcgctgtcgcggcgaggggaggaggaggttgcttcggcggcggcggcggcggcggacgcggtgcgccgccttccctccgtggaggacgtggaacctttgcaggggttggaattcgacgcatgggcctcgagcgccgcgccgatggagagcgactttgatgcgttcatggaatggttgagtaaggaggtaagcttggctgaggaggagaaccgcaaactatctgttgaaattagcagcgttgcagagacaactctcaaagattcgattcagttggatgctgatattgccgaattggagtcttcattgaagaaaattgattcacagggtttgaaacacttggaggcaagccacatcgctgagttatcagtttcaactgattcatgcagagaccaaattaaatttgacaaggactacaagtatgaggtactggaacttaaccaacagctggaaaaatatgagaatgacctgaagctgttagaaaaccaaaaaagtgctgaagcaatgtgggaacttgaatctatgttatcagaagcaaatgttttagactttaaagacaattgtctcagggtattcctgaaggaagctgtactcacgcctgaatgtttaatgtacgggaaagagtcagattgttctgttaattcattcgtttcagaccatgaattgctgatagaagttggagaaaacatggaaccaaagaaagtgcagatatttcctgatgatacctgtgtagatatacttcttgataagctcaaggcctccagagagaccatttctactacatcactgggatggattattcggcaatttcaacaccacattataatcaacactttgaggcgttccttggtgaaagatgctaataattccaggcattcttttgagtacattgacaaagatgggacaattctagctcacttagcgggtggcattgatgccttcatcaagatatctgcagactggccactgtcatcctgcggcctgaagttaatctccattcacagttccagggcgcagtcagcagatatttctttagctttgctttccaaaacaaaggaactggccaatggattggagcttcagactcgtcgacatctggtgaagtttgtagatgcaattgaagatattctttttcgagagatgcggtcgtag</cdnaseq>

Protein Sequence

<aaseq>MAETLAEDAADAPLDAAAIRSRLERLALSRRGEEEVASAAAAAA DAVRRLPSVEDVEPLQGLEFDAWASSAAPMESDFDAFMEWLSKEVSLAEEENRKLSVE ISSVAETTLKDSIQLDADIAELESSLKKIDSQGLKHLEASHIAELSVSTDSCRDQIKF DKDYKYEVLELNQQLEKYENDLKLLENQKSAEAMWELESMLSEANVLDFKDNCLRVFL KEAVLTPECLMYGKESDCSVNSFVSDHELLIEVGENMEPKKVQIFPDDTCVDILLDKL KASRETISTTSLGWIIRQFQHHIIINTLRRSLVKDANNSRHSFEYIDKDGTILAHLAG GIDAFIKISADWPLSSCGLKLISIHSSRAQSADISLALLSKTKELANGLELQTRRHLV KFVDAIEDILFREMRS</aaseq>

Gene Sequence

<dnaseqindica>72..133#237..342#502..568#695..796#896..960#1363..1461#1897..1964#2910..3123#3575..3630#3859..3966#4208..4391#4560..4655#tttttttcgaagtcgggggaaatttttcttgggcgggagaggggaggggattgccattgctgctgctgctaatggcggaaaccctagccgaggacgccgccgacgcgccgctcgacgcggcggccattcgaaggtaggtggctaaaccctccgccgtcctcctccgattcgcccgcgcggatcaggtgttcgttcatctcagtttttttttcgttttgttttcgtttttgggtcagccggttggagcggctcgcgctgtcgcggcgaggggaggaggaggttgcttcggcggcggcggcggcggcggacgcggtgcgccgccttccctccgtggaggacgtggtaagtggactggctgtgaacgtcgagggtttggttaatttgaattttattactatgaggggagagaaaaatgggtgcgcttttaattttaattttgttttccttgagaaaatcgaggcatgctaaatcattttgtgtttctgggttctgtgtttgtaggaacctttgcaggggttggaattcgacgcatgggcctcgagcgccgcgccgatggagagcgactttggttagctgtctgattccattttaattgttgtggtgttggttatcagtggcataatcataccagcttgagcttagtccacatatcctgtgcaaatctactcgtaaaattggattttcatactgctagatgcgttcatggaatggttgagtaaggaggtaagcttggctgaggaggagaaccgcaaactatctgttgaaattagcagcgttgcagagacaactctcaaaggtttgcttctcttgagtctctgttatttaaggtcctgttaattgacaacagcatgctcctcgcagttctcccttcaacacctaacactttgttatctagattcgattcagttggatgctgatattgccgaattggagtcttcattgaagaaaattgattcacaggttgttcttgaatgcttaaccctgtaatcctcattattttcttatctctatcacttctgagcttgctaaatattttttaagttgcttcacccaaatgaatgggaagtacaggattgttccctagatggaatgtacacgtcaactgtttgactcctgtcatataattgtgttactttcttgcttcactcacttccattgaatctcatttgtagctggttagctgcacaatttaataacaagtagtacagggctttgattgccataatgacattctagtgttagtgtttacctatcacttgggttggttggatgtaattttgtagtattgccaaatattttactcttttgaaacctacattagttcttttttctcaagcaatgctgtgccctttctttatgcagggtttgaaacacttggaggcaagccacatcgctgagttatcagtttcaactgattcatgcagagaccaaattaaatttgacaaggactacaagtatgaggtgtggttatatggtctaatagttgacagattccatgtatcatgctgtctatgctaaagtgctgattatattagacaactttaatgagctaaatatgagatgaatcaatgcaatgtcttcacaatataatttctcgaatgcagattttgttctctgttgaacattgtgtcatacaatctggtagtcactgtacatttctcaatgcagttctcctacatagtaacatagacagcatttcccacctctttatataaaaactgtattcctcaaacaaaaacacatgcagtcatacatatgctttcacacagagtagtatcgaatatcgatgacaatcaagcatatggatataatgcatatgcggtaatagcctttttgtattgagattttccatttttgcaatttgccttttaatatacctgttttatgatttcctaggtactggaacttaaccaacagctggaaaaatatgagaatgacctgaagctgttagaaaaccaaaaaaggtagtactgcttgtttatgttcagaatgatatgacatcttaatcttgtaatggaattagtttacagcatcttagcattgccaattctagttctactcatttatcatattttgaacaatatgacattatgatttatcataataataatctagcttgtcatattctgtatgattttcaaaacttaataccatttgttttcaataatgagtaatttaatttatcttacagatgaagtttctcagattccacatggactttatctgattgtcagtttgagtaaaacatttattgtgatgttttcatgaatttgaactctgccatgtttcttttttgaaattccctggaaataataaatctgttgcttcacattttatttgtaattctttaagaacagaatggacctaagcttggtttactgttatctaatgatgcgtggagattaagccatgtgatgtgcactacttgactatattgtagcacccatttatccattttttatcttcctcagtttcagcatttcaatcttctagaagaccttctcatcccaaatcccagcactattcttatttgcctatattgttaacttgaggacataaatgttttagctatccatttcttggtctggttttgagctggtgattctgctgctgtacatatcttcattattttcagccatgaactctttggtcggtctcctgcttggctttatacttaaagatttaaagtttataactgcagaatacatattcttacccttgcatcattaagtttgttaacttctaaatgttgaaccatgattacctgtaggtttcatgcatcattccatcctgttaagatgtgttattatagtcatttgaggtttaattgcatctgacctacatttagtgtttatgtttcctctggtttgaagatttgaattttctactgacatatgtaccatatccagtgctgaagcaatgtgggaacttgaatctatgttatcagaagcaaatgttttagactttaaagacaattgtctcagggtattcctgaaggaagctgtactcacgcctgaatgtttaatgtacgggaaagagtcagattgttctgttaattcattcgtttcagaccatgaattgctgatagaagttggagaaaacatggaaccaaagaaagtgcaggtaatctcataactgaatttgtcttcacattttaaaataaattatctctgggatctaatcattttgcattatgcatctaccattgattttgcatgcaatgccttatgcttgtatatatttttctgtcctaaatgcaatgatgcgcagtcctcctgcatatttgagaaagcaaaatgtaatgccttatgcattgcctgcggattactggttgtcacaattgaaatcacagaacaagatgtgaataataacgtgagtccatgtgaccattgcttaggagataatgatgattttttgtttcactcttgcataaccgtgggcaagaaaagcaagcttagttcagtttcactgtccaaaccatgccatgtttattaataatgacacaacaggaatttgcctttttaggaatttgtactggttatgtatattctgagtttgttttatgttttttcagatatttcctgatgatacctgtgtagatatacttcttgataagctcaaggcctccaggtattctgcatttgttaccttctctttcacaaagcttgcttgatattcttccaaataaaaagctagcttgttgaaacaatgtgatcaattaatgtttaaggtgatgatgtagattcaacacggtttcgtttctcatgttagcaataatgtcaatttctctgttattctactgaccaatgtttctttcttctttatgcattcttacactcaaatgaactctttttgtagagagaccatttctactacatcactgggatggattattcggcaatttcaacaccacattataatcaacactttgaggcgttccttggtgaaagatgctaataattccaggtaacatgattcaccattcctttgcattttgctagtaatttttttatttgttgatgaaacttgaaagttgaaattagtagttgcaaggattccgtgttctctacacctgtacgttgagtataccaagtttacaagatttaggaaagaactaaaccataggtgtccaacattgtaacgtatgcacataatttgttgcttcccgttcaatttttcttattttggtgagaccacattcttacaggcattcttttgagtacattgacaaagatgggacaattctagctcacttagcgggtggcattgatgccttcatcaagatatctgcagactggccactgtcatcctgcggcctgaagttaatctccattcacagttccagggcgcagtcagcagatatttctttagctttgctttccaaaacaaaggtacagatggtcatctcagccccaatgcttgtattttcagcagtaaaattatgcgtacaaattctgaaaccgtagaaagaatcatttccagcattcacaatttttattatatctcgttgaaacaaaccaccaacctaatcaaatttttgtgttctgcaaaacattcaggaactggccaatggattggagcttcagactcgtcgacatctggtgaagtttgtagatgcaattgaagatattctttttcgagagatgcggtcgtagcagctccattccagcaaagcatgtcttagaagactagacttgacccaaccagcctccccatcatcttgatgacaaggagaacgtagcatatcaatctccgggtgaccaccttgtaagcttgcacgttgtaaaggtctgatcacatttattaatgtgcgcatgagatgtttaagaaatgaccagtaaaagcatgggaaaacataaactgattaagccc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0379800, RefSeq:Os04g0379800