Os04g0380300

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Revision as of 11:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0380300| Description = Cyclin-like F-box domain containing protein| Version = NM_001059132.1 GI:115457993 GeneID:4335630| Length = 6415 bp|...")
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Gene Name

Os04g0380300

Description

Cyclin-like F-box domain containing protein

Version

NM_001059132.1 GI:115457993 GeneID:4335630

Length

6415 bp

Definition

Oryza sativa Japonica Group Os04g0380300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18623660..18630074

Sequence Coding Region

18623985..18624612,18624850..18625349

Expression

GEO Profiles:Os04g0380300

Genome Context

<gbrowseImage1> name=NC_008397:18623660..18630074 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18623660..18630074 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctaacacttgttggagcaagagagccatttgttaaagcacagaccaacctccctgctacaatgcagctgaagtttcctactagaacccaaggtgattcatacggagcactgatacctggtttgccagaagacttagcgaaagtatgccttgcccttgtccctcggagctacttccctgtcatgggtgcagtgtccaagagttggatgtcattcattgggagcaaggagttcattgctgttaggaaggaggtcgggaggcttgaagagcggatttatgccctgatcactggagatggaggaaagggaccctattgggaggtgctggggagcctggagcagcagaataggatgcttcctcctatgcctggactgactaaagctggatttagtgtggttgttcttgatggaaagctgcttgtcatggctggctatggtgttgattatggaaaagaatgtgtttctgatgaagtttatcagtatgatgctcgtctgaacaggtgggctgcactggccaagatgaacgtggcccgtcgtgacttcgcatgtgcagaggtcaatggtgcagtatatgttgctggtggatttggttctgatggcgatggcttgtcaagtgttgaagtatatgatccacaaagaaacaaatggacaataatagagagccttcgcagaccaaggtggggctcctttgcctgcagcttcaacggcaagctctacatcatgggtggccggtcaagcttcaccattggcaattcccgtttcattgacgtgtatgatcccattctccattcctggaccgagatcaagaagggttgtgtcatggtcacctctcatgctgtcatcaacaaaaggctgttctgcatcgagtggaagaaccagcggtcactcgcgatcttcaacccttcagacagttcatggcagaagatcccggtgccgcttaccggtagctcagccactctgttcagccttggggtgcttgatgggaagctgctgctgttttcccaggaggaagagcctgggtatcagactctgatgtatgatccgaccgcgcctgcgggatctgaatggcacacgtcgacgctcaagccatcagggctgtgcttatgcagtgtgaccattgaaagttga</cdnaseq>

Protein Sequence

<aaseq>MLTLVGAREPFVKAQTNLPATMQLKFPTRTQGDSYGALIPGLPE DLAKVCLALVPRSYFPVMGAVSKSWMSFIGSKEFIAVRKEVGRLEERIYALITGDGGK GPYWEVLGSLEQQNRMLPPMPGLTKAGFSVVVLDGKLLVMAGYGVDYGKECVSDEVYQ YDARLNRWAALAKMNVARRDFACAEVNGAVYVAGGFGSDGDGLSSVEVYDPQRNKWTI IESLRRPRWGSFACSFNGKLYIMGGRSSFTIGNSRFIDVYDPILHSWTEIKKGCVMVT SHAVINKRLFCIEWKNQRSLAIFNPSDSSWQKIPVPLTGSSATLFSLGVLDGKLLLFS QEEEPGYQTLMYDPTAPAGSEWHTSTLKPSGLCLCSVTIES</aaseq>

Gene Sequence

<dnaseqindica>5463..6090#4726..5225#acttgctcttcctaaccttccaaaactctgaagagtttctccattatcgttggcttgttacgctccaaagctttcaacattccagactccagccaaaatttccatattattccaggtaaatgttaatccctgtgtttaccatacccgtgctagcttaatcttgtctaatttcggggtagaattgaccgttctctgacctaggggataaggagaaaaaaaaaacaagctttctagtgttcttcaggcttgttgctgtgagttcttgtttgatcgtttcgctcagcacaccattttgtttgattttgaagcctttgaatggatcgagttttttggtttccaaagatgcatttctttttctcttctctgcagatggttcttagccctgcaaaataattctcgtttcgtcaatcgtcgtggcgattagttgttagttttcgctgctatttggatgtggaagagggaatggttttttaccatatatgagatgcagggcataacgaactggaacttaaattttgatcattttgtttagttcaaaaaacatatgtggttttgttggttatgttttcgattttatcagcgagagaagatgccctgacgatctgattctcaaggtcttaggctacgaggcttcctttttaatttgtgattgattgtataggctttgaagtatcaaaaattatttaacatctatgtaatgtaaccaccaaactgtggtgttttctctactcctctttaagtgaatggcttgacaaatgttatccttagaagaaacgtaatatgttcattagattagcatgaactagcattctaggaaaaccattctagtagtatgttttatggtgtaaattgttaattactcctagtccctaaaggctttgacatgaatacaatcagtaaagcatcatggtgagcaaagaaatttctagcgtactccctccgtcccgtaaaaaacgaatctagaactagatatgacatattctaatactacgaatctggaacatatgtatacccagattcgtaagactagatatgtcacatccggtattaagttgattttttatgtaacagatggagtatgtgctaacgatatcctaacaatcaaaaatggtaaaaaaaaatatatttattaatttaactatccactgtcaacttcaatgtgacgctgaaaaaaattaaaagtacgaaattttgaaacaataatattattatattagttttatgaaaatgatatcggtatatcatgtctagaacttccagctcatgagctttaactgcctattgttgggtgatttctaataaaaaatcacccagattttttcaactcttagatttacatttaacggactataaaagaaaaaaacaaatacatatttacttacacaacatttttatcaaaattacaatgcgcttacatgtcacatcagctgaatttacaaatgtaattttagtttatattttattttagtttcaaatatcttaatttttcaaccgttaaagaaaataatttttatttagaaaagaaagagagagagagcgataaggaagcggagaaagcaagagcgagaaaacgtcatccgtgcttatttctccactaatctcggcgcacgattctacgcccaacaaaacgttaaatatcatagaagaaatcacgatgtttagcaaaatcgtttaaatatcatagaagaagtggcccgatagatgtttcctaaccgaacggccccccccccccacccaaaaaaaaagccctgctgcgacgtgcattgggcctgcacgaggcccgttttggcacgaagcagatgggccgtgccgtcccagcctggcacggcccaagtccaaaaggcctacggagctcggacttctctcgtacgcctcgtgaaatcgccggcgccactgccgcaaaccctacttccgatccgcccccgccgccgccgcaaaccatacttccgccgcctcgcgccgtcgccatgccgcccaccacaccggccaagcccgtccccggccggcgtccgcctcgcgacgtcggaccccctcccccaaggctgcctttcgagggcagcctgggccatacacccctaacccaccctcaccaccacacacacacggtaagtctgttaggttttcgatctagagtttgctgccaattacaaagaaactacactggatagatgttgtctactttgtctgtgccaactgcggcatactctgtgtgtcttgatgataaattgtattgtatatgtagtagtagcttattctgagtaatgtgtgttagtattattgatttgcctgcaagctgctgtggtgtggtggtacccatcccatgtaagactgttcttctgtttagagctgtgccggcactgttcgaagacttgcgcgatgtcggtagctcacgtaaactttggtgcgttgtgctttcgcgcttgcttacgtttgttgttgcttcttgagtcaacgaagctacggtttcgcttcgtatagcaagtttagtgtacttgtaaattgtaatccctaccattcatgcactgatcttgatcacagacttcggaattttggaaaggttctgttgggtttcagtctcgtgtgttgttgtgccatccggtgttgttagtccttggaactgttgctttttttctcaatcggtgttacaatctttatggctcattgcatgaaactttgtgatgtataaccctgctttttcttttttaactagtcaagtgcctgcgacaggttcaactttgaagtacaccgtacatatttgtgcacgaggaatctcactactgaaatgtggtcagatgttcaaaaaggtccatgtcaacaaaaaaagcatcactgaacatcagatagattgatggtttacatttcatatatgtaccaactagacagcatacaaatataaggagtcatcgtattgtttacctttgctttaatacatattcatagtttgatcacagactcagaattgatatactgaaagctaaacaatcggaagtgtcaggaggctatatatgaaagttaaggtaaatatgatgaaatcaatgagtattttatggccttaatgatgcacaataagaggaaaattaatgtttctccattcttgccttgatgaattgtaagcatctgtaggctcatttaaaagcacctggcatagaacatccaacacatgagctcttgtcggctctgagatctaatttagactcttataataattattgctgcccctacgtaataaacagagtgtatttataatagtccttaactcataccagatagagatatttggtcaaataagttcaatctgaaatgatggggttgctttgctcactactctcagcaagattgtgattccactagacgccaccatgatacacgttgagaagcatgttgtcctgatacaaaaaatatgacctacaagttgtatgttaaaaatgttctggggattattttgtatattattgtaaaactggtagtatagaaaaagtaagcaatattatgcttactttttctaaactacccattttataatactaaaataaatccccgacccattttttcaagtcatttgttcgtgtatggggcaattatgctttgtgtcatataacaaggtggtgtctagaagagtcacaatgttgctgcctagcagctacatttgtgagagttggcagcatggcctgtaacccatacactattttcaattgaacttctttgaatgcgatatctctattttggcaagggtaagaattattatggattcatccatgtttattaagtaggggcagtatctattttggcgaggataagggttattatggacttaccctgtttattgagtaggggaagtaaaatctagtttaagttctttgaaatgagcttttagacttagtgattcattaaagcaaatatagcatggagaaacgtcaaactttcccttattgcgcatcatcaaggcgatggacacaccttggtttcacccttttttacctttcatatataacccctgaatatttccggtattttagtttcctatatgtcaattttgattctctgatcaattttttttattttacagccgtggtaattgtatgatgactccttatatttgtatgatctccggtttatatatgatttaatcttcaatttgtctgatgttttttaatacttgtactgttattttgatttttgtaattaataattttatttgagaaaaaccgtactctaaaaaattatctctttaattttgtccatgtaggtaactggctgtgatgaaaatggaaaccacaggtggttaatggctatcaaaatcgtatagccattggttactctaattattacctaaatgacggatgctaacatcctatttctatccagcataaatggtatccattattttatttagatattgaatgccaaatgtgcaagacagggacatgttcttacttcattaataaggagatcaggagaatccattttaaggtcttccaccatcggatggcatttgacacaggaaagattaggacagagaaatctgagctgaagaacctcattttcgcatcattcagaccattttatctgatgatccccgttggtgatggatatcatgaatccccctgctaggacagccgtgatacatagcaactaagcaagtgataaaagggatcatttaagctgtttagtgttaacaaaacgaagtgctaaagcctaaaaggtgccctgctgctgcttgtggcaatgctaacacttgttggagcaagagagccatttgttaaagcacagaccaacctccctgctacaatgcagctgaagtttcctactagaacccaaggtgattcatacggagcactgatacctggtttgccagaagacttagcgaaagtatgccttgcccttgtccctcggagctacttccctgtcatgggtgcagtgtccaagagttggatgtcattcattgggagcaaggagttcattgctgttaggaaggaggtcgggaggcttgaagagcggatttatgccctgatcactggagatggaggaaagggaccctattgggaggtgctggggagcctggagcagcagaataggatgcttcctcctatgcctggactgactaaagctggatttagtgtggttgttcttgatggaaagctgcttgtcatggctggctatggtgttgattatggaaaagaatgtgtttctgatgaagtttatcagtatgatgctcgtctgaacaggtatgctcgagtcattacaagcatttattacagtgctcctttgtcttcttttcttacatcagatgaatacttcaaattctcatagtagcaatagtttcccaaaaaaccttgtacaggtaatccattagtgccatgagttttctaaatacagagtaaaaaaatttaaataggaacttgatcattgtaagttaaaatacaaaattaacaaaactaattcattctgcttaaaatactcaggtgggctgcactggccaagatgaacgtggcccgtcgtgacttcgcatgtgcagaggtcaatggtgcagtatatgttgctggtggatttggttctgatggcgatggcttgtcaagtgttgaagtatatgatccacaaagaaacaaatggacaataatagagagccttcgcagaccaaggtggggctcctttgcctgcagcttcaacggcaagctctacatcatgggtggccggtcaagcttcaccattggcaattcccgtttcattgacgtgtatgatcccattctccattcctggaccgagatcaagaagggttgtgtcatggtcacctctcatgctgtcatcaacaaaaggctgttctgcatcgagtggaagaaccagcggtcactcgcgatcttcaacccttcagacagttcatggcagaagatcccggtgccgcttaccggtagctcagccactctgttcagccttggggtgcttgatgggaagctgctgctgttttcccaggaggaagagcctgggtatcagactctgatgtatgatccgaccgcgcctgcgggatctgaatggcacacgtcgacgctcaagccatcagggctgtgcttatgcagtgtgaccattgaaagttgatgtcatcagtaggcatagattgtacttcctccgtcccataaaaaacaaatctagaattatatgtgacatattctagtacaacgaacctggacggagtcacgtccaatctaggtttgttttctgtgggacagagggagtatatatttcttgcattctagtgtctatatgttcttctggaactctgtttatatgtgattctctgttcagattattcctagccacaagcatgcactcaattcgtcagctagcttgtgtgttggaccaaacattttgtgtaaagatgcagacatttcacttcctgaataatgtcagatttctcttgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0380300, RefSeq:Os04g0380300