Os04g0381100

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Revision as of 11:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0381100| Description = Bile acid:sodium symporter family protein| Version = NM_001059136.1 GI:115458001 GeneID:4335634| Length = 5105 bp| ...")
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Gene Name

Os04g0381100

Description

Bile acid:sodium symporter family protein

Version

NM_001059136.1 GI:115458001 GeneID:4335634

Length

5105 bp

Definition

Oryza sativa Japonica Group Os04g0381100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18696951..18702055

Sequence Coding Region

18697604..18698027,18698721..18698809,18699186..18699279,18699355..18699388,18700244..18700298
,18700384..18700467,18700542..18700829,18701558..18701710

Expression

GEO Profiles:Os04g0381100

Genome Context

<gbrowseImage1> name=NC_008397:18696951..18702055 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18696951..18702055 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctctcctccgccggccgccggctgctccccaccgcaccccgatccaccatgacaagcgccttcacctcttcagtacacacaacacccgtcatagagctaccgtctcatctctccctgtcacctgccttcgcatccgatacagcagcagcaacccggttcgacacctttgtggcattccgtcgagcaggtgccatgcggctgctgatccggcgccctccaagataccaggaggtggcagcggtgcattggaggctggagttgtaggttggcgggatctgcttttgcaggttggcgaggtgctgtcgcttgggttcccagtgtgggtggcgtccgcttgcgccgttgcgctttggcggccaccggccttcctctgggtcagtcccatggcccagattgtcggcatttcctttaccatgctgggaatgggaatgacattgacattagatgacctgaaaactgcactattgatgcccaaggagttagcatctgggtttttacttcaatactcggtgatgccactgtcaggatttctcatcagcaagctattaaacttaccatcctattatgctgctggattgatattggtgtcctgttgccctggaggcacagcaagcaacattgttacatatttagcaaggggaaatgttgctctttcggtactgatgacagcagcaagcacttttgctgcagcgttcttaactcctcttctgacatccaaactggcgggacaatatgttgcagtagatccaatgggattgtttgtgtcaacatctcaggttgtcctagcacctgtgctacttggtgctctacttaatcagtactgcaacggtttagttcagttagtttctcccttgatgccattcattgctgtggcaactgtagctgttctttgtggcaatgctatcgcacagaatgcttcagccattctatcatccggtctacaagtggttatgtctgtttgttggttgcatgcatctggctttttctttggttatgttctttctagaacgattggcatcgatatctcttcatcacgaacaatctctattgaggttggcatgcagaattcggtgctgggtgtagttcttgcgagcaagcattttggaaatcctctcacagcagttccctgtgctgtttctagcgtctgccattcggtgtatggtagccttttagctggaatctggaggtctttgcccccaaatgacaagggccagtaa</cdnaseq>

Protein Sequence

<aaseq>MPLLRRPPAAPHRTPIHHDKRLHLFSTHNTRHRATVSSLPVTCL RIRYSSSNPVRHLCGIPSSRCHAAADPAPSKIPGGGSGALEAGVVGWRDLLLQVGEVL SLGFPVWVASACAVALWRPPAFLWVSPMAQIVGISFTMLGMGMTLTLDDLKTALLMPK ELASGFLLQYSVMPLSGFLISKLLNLPSYYAAGLILVSCCPGGTASNIVTYLARGNVA LSVLMTAASTFAAAFLTPLLTSKLAGQYVAVDPMGLFVSTSQVVLAPVLLGALLNQYC NGLVQLVSPLMPFIAVATVAVLCGNAIAQNASAILSSGLQVVMSVCWLHASGFFFGYV LSRTIGIDISSSRTISIEVGMQNSVLGVVLASKHFGNPLTAVPCAVSSVCHSVYGSLL AGIWRSLPPNDKGQ</aaseq>

Gene Sequence

<dnaseqindica>654..1077#1771..1859#2236..2329#2405..2438#3294..3348#3434..3517#3592..3879#4608..4760#gctcactcgctctccagtctccacctcctctcgacgctcgacaggaagacgcgccgccgccgccgcccatccgacgccgcgacgccgacgtgccgtgcgtccgtgacgccgccgccgccaatccctcccgccttcgcgtcgtgccgccgcgccgtcggtggtcgcccgtcacccgtcgccggctcgccgcgtcttttgggtggcgccgtcgcgcctcgtatccaatccaccccgcgccgcgccgcgccgtgccgccgcccccaagaggccgagacgcccaagtcccaactcccaacggccaaaggtaactagtactaactattgtcttgctagactgctactgacctactgtatgtagtgctgtgattttggattaggagcatttttttttaccatttgaatccagggattgagggatggttggttgattgcatatgtttgaacattggatttgaaccatgctatatgtgacgggacgagcaaatgagcatgtagactacttatgcattgcatttgtggctatgagaatgcttaacctgaacatggactattttctctaagatgttcactatttatatcatatactttgctgaatcttggactcacatctgtttccagtaatcgttgaaggtgacaggtcaacatcccacgtcatgcctctcctccgccggccgccggctgctccccaccgcaccccgatccaccatgacaagcgccttcacctcttcagtacacacaacacccgtcatagagctaccgtctcatctctccctgtcacctgccttcgcatccgatacagcagcagcaacccggttcgacacctttgtggcattccgtcgagcaggtgccatgcggctgctgatccggcgccctccaagataccaggaggtggcagcggtgcattggaggctggagttgtaggttggcgggatctgcttttgcaggttggcgaggtgctgtcgcttgggttcccagtgtgggtggcgtccgcttgcgccgttgcgctttggcggccaccggccttcctctgggtcagtcccatggcccagattgtcggcatttcctttaccatgctgggtctgtactattcatcccctctactacttagtagtttctactttccttctgtgttgttgtatcaccatgcctgcactcaaaaaatcaattttgtttgtgatggttctaacattgaagatggaagtgttagctttactacatatgcataaaaggtttcttcaatatactccctccgttccaaattgatctacatatttcataggtacaccaagatcaagaaaagctaataactctctcatactatatttattttagcaacaaactcgatgcatgcaccatccccaatatttcctagccaatagcaaatcaagatattgcatgtgggttataagtacttgtgtgcatggatgcatgcatcaatgtccatttactccaatgcacaaataacgaatagacttaataaatgaacacaaatatgtagatcatttaggaataacctcaaaaaaactatatgtagatcaatttggaatggaggggagtaatttttagcacatgtcacctgaaacatcaaatatcagagatggctggttatacatagattggtcattgacagacatgaaattcttttccttatattgttgtcaattttattcttgaagagagaagggtgctgtgaactgaattttcttgtgcatggcggtttaagttagttgaattttgtgactgatatatagttgaatttattttgttcaggaatgggaatgacattgacattagatgacctgaaaactgcactattgatgcccaaggagttagcatctgggtttttacttcaatactcggtcagttcccaaacttgctggccacttcatttcataaccttacaggccatgagatcatcatttcaattaaaaaacaaaatagctgcagttttggacttgcctattactagaggtgtaggaacctttgttgaatcattttcgtcaaaaaaaagatcctttgttgaatcaatggacagatgttctatacattcatcaagattatcatgtgcagctgacatgctatgcatttagaaaaaaccatatcgaattcttatttgtttgtacactaccagtgcagaggatcgtacatttaaacttcattgtgattatgcatgtttttgtggtttgctgtttccatgttatatccaaaagtctagagctaatgatttatgtacaggtgatgccactgtcaggatttctcatcagcaagctattaaacttaccatcctattatgctgctggattgatattggtgtcctgttgccctggaggtgtgcacacactttagtctttttgtttatattggtgccagattttaaactgagaaaggcaaatactctttgcaggcacagcaagcaacattgttacatatttagcaaggtaatgagaaaaaatattaatgtactctctccatcccacaataagggcacttctagtatttgaattttgtcccaaaaagagtgtacttctagagtactacttttccttccaatcatccatcattcaaatttctccccatcttacccccaagcacccttggctcccaatcacctcatttaatgaggggcatctaggtcatttcccacccctgataatgttttttgaatcctagaagtgcacttattgtgggacagagggagtagcaatcttcatttagtcatggccttgttacaaaatgttggaaaatgtgtcaatctgttgataatttttcacgctgactatgacacaagcctatgaaatagggaaaattgccagaattcgacaaagttgaggtgctttgcagatttgccacatggttgagggtaactagggggatatcctctcatttgccacattatcacttgaattacccaaagtatccctgtcttcttcctctcttactgtcaagtggaccccagcagccagtatcctaactatatggttgaattagtggatccccgtgatgcataaaacagaaatgtaaacaaaataacctgttctctagctgagtaataaatttcaggtgtatcttgaattagactggagttcattctctcctttgacttttgacacaaatgtattttctatgaaattgagcatttgcatcaaatttctatagcaaaaatattagaagatgcattattaactgcacaatatgtggacaaatttgtggcactatgagaggacatctttctgttctttttagtatcatgaaaatgcacacaattaacacaaattagcatcactgtgtggcaggggaaatgttgctctttcggtactgatgacagcagcaagcacttttgctgcagcggtaatgaaccactctcagatctgtttttatctttaaactgaactccaaaagctcttttttatgcttttgtaacttcctgatgcagttcttaactcctcttctgacatccaaactggcgggacaatatgttgcagtagatccaatgggattgtttgtgtcaacatctcaggtgctggaaatcaatctgatgttatactgctgaatttccttactcctagctaagttggatatacatgaacgcaggttgtcctagcacctgtgctacttggtgctctacttaatcagtactgcaacggtttagttcagttagtttctcccttgatgccattcattgctgtggcaactgtagctgttctttgtggcaatgctatcgcacagaatgcttcagccattctatcatccggtctacaagtggttatgtctgtttgttggttgcatgcatctggctttttctttggttatgttctttctagaacgattggcatcgatatctcttcatcacgaacaatctctattgaggttggcatgcaggtaatttcttccttttgtttgcaacttacaagcaaatttacagttccttctcttcctaattaaaaaaagtggcttgttgctaaaccatgccatggttttctaacttagatattaattttgtcctgttgtcatgccatgcctttggaataaacatgtccagattgttttaacattgcaactaatccatgtccatattcgtactaggatgtgtcacgtccctccaaaatcccttatgttatgggacggatggagtatttctataacggaagtctcattatttgtactcctttaaaaggactccaatggtggtggcagtgaatctgccacttcatctactcctgctgcaatttttacatgttaccccttgaacttcttaatattacataacaactaaatctaaatagatggccacatataaaattaatgtggatagggagaatgtgggtaacatatttcatggaaaatatgatttatttattttagaaaatattgtgatatttttccttttatccgcagcaaagcacagacatttagcttaccatgttacaattgagattgcaactcatgcttgtattaggatattattaaaatgaactattgctagaaagccatacgcgcatacatatacgtcctatcattttcccattgcaacctatggaacaaatgtcatactcttaccatcattcatgtatcagttcattttctttgcatgattttcctgcctgcagaattcggtgctgggtgtagttcttgcgagcaagcattttggaaatcctctcacagcagttccctgtgctgtttctagcgtctgccattcggtgtatggtagccttttagctggaatctggaggtctttgcccccaaatgacaagggccagtaatgcgtccttgaccatgagatgtcaagctgttatgccaccagcagaagccctcttagtctgccatctgctgcaataaacaccatgctttcatgattagcgtccagcttgaaccagataggtgttgtatttatttttcaatctgcttcagtaagcaccatgtcttcatgtttagcgtccagcttgaaccagataggtcttcatttatctcgatcattttgcattcaaatcttgaacttgggcatattcctgcgcatggttgccttaaacagaactagcaataaacgcgcgctatactgtgcgcagaccatgaatgcatgaaatgaaaagaaaaagaagagatttccg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0381100, RefSeq:Os04g0381100