Os04g0382200

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Revision as of 11:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0382200| Description = Exo70 exocyst complex subunit family protein| Version = NM_001059141.1 GI:115458011 GeneID:4335639| Length = 2578 bp...")
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Gene Name

Os04g0382200

Description

Exo70 exocyst complex subunit family protein

Version

NM_001059141.1 GI:115458011 GeneID:4335639

Length

2578 bp

Definition

Oryza sativa Japonica Group Os04g0382200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18761601..18764178

Sequence Coding Region

18761710..18763776

Expression

GEO Profiles:Os04g0382200

Genome Context

<gbrowseImage1> name=NC_008397:18761601..18764178 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18761601..18764178 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcgccgcccgcgccgccccatccccagccggaggagctggaggtggcggaggaaccccccgccgcggcgggaggagtggggaacgacaaggtgctcgcggcggcgcagcacatcgtgaagtcgctggccacgtcgaagaacgccgcggacgacatgatccgcatcctctccggcttcgaccaccgcttctcctccatcaccgccgacctcttcccctcgcccttgccgtcgtcgggcgccgggcccaccccgcctccgcctccgccgccgcggggggcgttcgaggccgcggagaggctcatccggcagtgggacgcgacctcggagctgctggtgttcgagggccccgagggggacgtcgccgactacctcgaggcggtcgacgtcgccgtcgaccagctgctctccggggtgggggccgccgccgccgacgccgaggccgaggcggcgggcgtcgtggtgcagctcgcgatggcgcggatggaggaggagctccgccacctcatggtccgccacgcggtgccgctggacgcgagcgggctcttctgctcgctgcgccgcctctccctcgagtccatggacgacctcgacacctcctccgagttcgatcccatcaccccgcacagcctggagggcggcccggacaccgctcgcagcgccagcctcgtggggaaccccttcgacgaccaggtgttcgacctggtgcgccctgaggccattgacgatctgcgctccatcgctcaaaggatggaccgcgcggggtatgccagtgagctcgagcaggtctactgtggcgtccgacgtgacctgctcgacgagtgcctcgcggtgctcggggtcgaacgcctcagcatcgatgaagtgcagcgcatggagtggaagcttctgaatgacaagatgaagaaatgggtgcatggggtcaagacggtcgtgcgttccctgctgaccggtgagcgccggatctgtgatcaggtgctcgccgtgtctgatgagctgcgtgatgagtgttttgttgaatctaccaagggttgcataatgcagattcttaactttggtgatgctgtggcggtgtgctctcgctcgccggagaagctctcccggattcttgacatgtatgaggcacttgctgaggtgatccctgaactgaaggagctgttctttgggaattctgggaatgatgtaatctgtgatttggagggggttcttgaaaggcttggggacgcagtgaagggcacacttctcgagtttgggaaagttcttcagcaggagtcatcacggcggcctatgatggctggtgagatccacccaatgacacgttacgtgatgaactatcttcggttgttggttgtttacagtgatacgcttgacaaactcttgggtgacgattctgctggagatgttgatcatagtgatacgcatagaggtggtgatgatgaggaggagtatttggagagcttgtccccacttggacgacatttagtgaagctgatatcttatctggaggcaaatttggaggaaaaatcaaaactgtacgaggatggtgcactgcaatgcatattttccatgaataatatactctatattgtccaaaaggtgaaggactctgaacttgggaggattttaggtgatcactggatacggaggcgccgtgggaagattcggcaaaattcaaagaactaccttaggatatcatggactaaggttttgtcttttctcaaggatgatgcacacggcggcagaagcggaagtggaagtggtagtgggaatagctctaggatcaaggagaaattcaagaacttcaacttggcctttgatgagatatacaggagtcaaacgctctggaaggtaccagatcctcagcttcgtgaagagctcaagatatctatctctgaaaatgtgataccagcataccgtgcttttctgggaagatatggtagtctagtggatagcggaaggaattcaggtagatacatcaaatacaccccagaggacttggagaatcagctgtctgatctatttgaaggttcactagggcctgccaaccattctaggagaagatag</cdnaseq>

Protein Sequence

<aaseq>MSAPPAPPHPQPEELEVAEEPPAAAGGVGNDKVLAAAQHIVKSL ATSKNAADDMIRILSGFDHRFSSITADLFPSPLPSSGAGPTPPPPPPPRGAFEAAERL IRQWDATSELLVFEGPEGDVADYLEAVDVAVDQLLSGVGAAAADAEAEAAGVVVQLAM ARMEEELRHLMVRHAVPLDASGLFCSLRRLSLESMDDLDTSSEFDPITPHSLEGGPDT ARSASLVGNPFDDQVFDLVRPEAIDDLRSIAQRMDRAGYASELEQVYCGVRRDLLDEC LAVLGVERLSIDEVQRMEWKLLNDKMKKWVHGVKTVVRSLLTGERRICDQVLAVSDEL RDECFVESTKGCIMQILNFGDAVAVCSRSPEKLSRILDMYEALAEVIPELKELFFGNS GNDVICDLEGVLERLGDAVKGTLLEFGKVLQQESSRRPMMAGEIHPMTRYVMNYLRLL VVYSDTLDKLLGDDSAGDVDHSDTHRGGDDEEEYLESLSPLGRHLVKLISYLEANLEE KSKLYEDGALQCIFSMNNILYIVQKVKDSELGRILGDHWIRRRRGKIRQNSKNYLRIS WTKVLSFLKDDAHGGRSGSGSGSGNSSRIKEKFKNFNLAFDEIYRSQTLWKVPDPQLR EELKISISENVIPAYRAFLGRYGSLVDSGRNSGRYIKYTPEDLENQLSDLFEGSLGPA NHSRRR</aaseq>

Gene Sequence

<dnaseqindica>110..2176#atttttctactgcttttactgcgccccaaatcaacccaccctccgcggcggcggcgcgattactcccgtgctcgctcacttaaccctagctccctcgccgccgccggcgatgtcggcgccgcccgcgccgccccatccccagccggaggagctggaggtggcggaggaaccccccgccgcggcgggaggagtggggaacgacaaggtgctcgcggcggcgcagcacatcgtgaagtcgctggccacgtcgaagaacgccgcggacgacatgatccgcatcctctccggcttcgaccaccgcttctcctccatcaccgccgacctcttcccctcgcccttgccgtcgtcgggcgccgggcccaccccgcctccgcctccgccgccgcggggggcgttcgaggccgcggagaggctcatccggcagtgggacgcgacctcggagctgctggtgttcgagggccccgagggggacgtcgccgactacctcgaggcggtcgacgtcgccgtcgaccagctgctctccggggtgggggccgccgccgccgacgccgaggccgaggcggcgggcgtcgtggtgcagctcgcgatggcgcggatggaggaggagctccgccacctcatggtccgccacgcggtgccgctggacgcgagcgggctcttctgctcgctgcgccgcctctccctcgagtccatggacgacctcgacacctcctccgagttcgatcccatcaccccgcacagcctggagggcggcccggacaccgctcgcagcgccagcctcgtggggaaccccttcgacgaccaggtgttcgacctggtgcgccctgaggccattgacgatctgcgctccatcgctcaaaggatggaccgcgcggggtatgccagtgagctcgagcaggtctactgtggcgtccgacgtgacctgctcgacgagtgcctcgcggtgctcggggtcgaacgcctcagcatcgatgaagtgcagcgcatggagtggaagcttctgaatgacaagatgaagaaatgggtgcatggggtcaagacggtcgtgcgttccctgctgaccggtgagcgccggatctgtgatcaggtgctcgccgtgtctgatgagctgcgtgatgagtgttttgttgaatctaccaagggttgcataatgcagattcttaactttggtgatgctgtggcggtgtgctctcgctcgccggagaagctctcccggattcttgacatgtatgaggcacttgctgaggtgatccctgaactgaaggagctgttctttgggaattctgggaatgatgtaatctgtgatttggagggggttcttgaaaggcttggggacgcagtgaagggcacacttctcgagtttgggaaagttcttcagcaggagtcatcacggcggcctatgatggctggtgagatccacccaatgacacgttacgtgatgaactatcttcggttgttggttgtttacagtgatacgcttgacaaactcttgggtgacgattctgctggagatgttgatcatagtgatacgcatagaggtggtgatgatgaggaggagtatttggagagcttgtccccacttggacgacatttagtgaagctgatatcttatctggaggcaaatttggaggaaaaatcaaaactgtacgaggatggtgcactgcaatgcatattttccatgaataatatactctatattgtccaaaaggtgaaggactctgaacttgggaggattttaggtgatcactggatacggaggcgccgtgggaagattcggcaaaattcaaagaactaccttaggatatcatggactaaggttttgtcttttctcaaggatgatgcacacggcggcagaagcggaagtggaagtggtagtgggaatagctctaggatcaaggagaaattcaagaacttcaacttggcctttgatgagatatacaggagtcaaacgctctggaaggtaccagatcctcagcttcgtgaagagctcaagatatctatctctgaaaatgtgataccagcataccgtgcttttctgggaagatatggtagtctagtggatagcggaaggaattcaggtagatacatcaaatacaccccagaggacttggagaatcagctgtctgatctatttgaaggttcactagggcctgccaaccattctaggagaagatagtagctcccatttgactaaatttggtgacaggtatgcttttgctacaagggatgctatgtgtccgaactgctgagtcatcacatggactgattggtgccttttgagtttagattgtccccttggttattacaatattgtaatactatacaaggatcccttcgtttttctccatcagattatatgtaccaagaagtgatgtacatacattgctttttcagtgtgttcatatccttgcacacttcatttccatgatccagtacctttgcactttgtagggtggccagttcttggaatagatcagacaagtaataggcatttgttgctggagcaatcttatctggcaagatactgatatgaattaaatacatttattgtcgattctgaaataaacgtaattttagt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0382200, RefSeq:Os04g0382200