Os04g0385600

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Revision as of 11:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0385600| Description = Zinc finger, MYND-type domain containing protein| Version = NM_001059153.1 GI:115458035 GeneID:4335651| Length = 136...")
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Gene Name

Os04g0385600

Description

Zinc finger, MYND-type domain containing protein

Version

NM_001059153.1 GI:115458035 GeneID:4335651

Length

1367 bp

Definition

Oryza sativa Japonica Group Os04g0385600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18926702..18928068

Sequence Coding Region

18926702..18927481,18927576..18927738,18927824..18928068

Expression

GEO Profiles:Os04g0385600

Genome Context

<gbrowseImage1> name=NC_008397:18926702..18928068 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18926702..18928068 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggacgaggcgaggcgcgtgctactcgccggcgtcgtgccaggacgggcggcggaagaggcggaggatcgccggcggcggcggggagggatcggctgcggcggccgcggcggtggccggcggcgccgaggggcctgccaatgatatgttcgaggagttgccggatgatcttgtggtgtcgatcctcgccgacgtcgcggcgtccgcccggtcgcccggtgacctcgccggcgccatgctcacgtgcaagcggttcagggagctcgggcagagcaaggtggtgctcgcgagggcgtcgccgcggtgcctcgccgtgcgggccaaggcgtggtcggacgctgcgcaccgcttcctgcagcgctgcgccgacgccggcaacctcgacgcgtgctaccttcttggcatgatccggttttattgtctcgggagccgcgggtcgggagcggcgctgatggcggcggcggcggtgggcgggcaccgggaggcgctgtactcgctggcggtgatccagttcaacggcagcggcggaagcaaggacgaccgcgacctccgcgccggggcggcgctgtgcgcgcgcgcggcgtcgctggggcacgtcgacgcgctccgggagctcgggcactgcctgcaggacggctacggcgtgcgccgctccgtgctcgacgggcgccgcctcctcatccaggccaacgcccgcgagctcgccgccgcggtcgccgcctcggcctcgctcctccgcgcggccaccggcaagccggcggcggccgcctcccgccgccactcgtgcctcctcagcgacttcggctgccacgccgcggcgcccaaggccggcggcgaggcgcacgccgccaaccgcttcctcgtcgactggttcgcgtcgcgcccgctcgccggctccaccgccgccgccgccgcggcgccaacgccagggagcgccgcggaggacgaggcggccgggctgcgcctgtgctcgcacgcgctgtgcgggcggccggagacgcggcgccacgagttccggcgctgctcggtgtgcggcgtggtgaactactgctcccgggcgtgccaggcgctgcactggaagacggcgcacaaggcggagtgcacgcccatggaccggtggctcgacaacgccgccgccggcgccgccaaccccaatgccgccgccatggccgcgcccgccccatga</cdnaseq>

Protein Sequence

<aaseq>MRTRRGACYSPASCQDGRRKRRRIAGGGGEGSAAAAAAVAGGAE GPANDMFEELPDDLVVSILADVAASARSPGDLAGAMLTCKRFRELGQSKVVLARASPR CLAVRAKAWSDAAHRFLQRCADAGNLDACYLLGMIRFYCLGSRGSGAALMAAAAVGGH REALYSLAVIQFNGSGGSKDDRDLRAGAALCARAASLGHVDALRELGHCLQDGYGVRR SVLDGRRLLIQANARELAAAVAASASLLRAATGKPAAAASRRHSCLLSDFGCHAAAPK AGGEAHAANRFLVDWFASRPLAGSTAAAAAAPTPGSAAEDEAAGLRLCSHALCGRPET RRHEFRRCSVCGVVNYCSRACQALHWKTAHKAECTPMDRWLDNAAAGAANPNAAAMAA PAP</aaseq>

Gene Sequence

<dnaseqindica>588..1367#331..493#1..245#atgaggacgaggcgaggcgcgtgctactcgccggcgtcgtgccaggacgggcggcggaagaggcggaggatcgccggcggcggcggggagggatcggctgcggcggccgcggcggtggccggcggcgccgaggggcctgccaatgatatgttcgaggagttgccggatgatcttgtggtgtcgatcctcgccgacgtcgcggcgtccgcccggtcgcccggtgacctcgccggcgccatgctcacgtacgtgtgtgttggtcgcaagaaaccaagaaaaaccaagaaatcgtggagttctgacatggtgtttgtgttgttgcatatgcaggtgcaagcggttcagggagctcgggcagagcaaggtggtgctcgcgagggcgtcgccgcggtgcctcgccgtgcgggccaaggcgtggtcggacgctgcgcaccgcttcctgcagcgctgcgccgacgccggcaacctcgacgcgtgctaccttcttggcatggtgagattgagctcggtttctgccgaatcgtcgtggtgttcgtgcttgcggcggttgtgctgatcgtgttcttcttgtgatgtcaatggcgcagatccggttttattgtctcgggagccgcgggtcgggagcggcgctgatggcggcggcggcggtgggcgggcaccgggaggcgctgtactcgctggcggtgatccagttcaacggcagcggcggaagcaaggacgaccgcgacctccgcgccggggcggcgctgtgcgcgcgcgcggcgtcgctggggcacgtcgacgcgctccgggagctcgggcactgcctgcaggacggctacggcgtgcgccgctccgtgctcgacgggcgccgcctcctcatccaggccaacgcccgcgagctcgccgccgcggtcgccgcctcggcctcgctcctccgcgcggccaccggcaagccggcggcggccgcctcccgccgccactcgtgcctcctcagcgacttcggctgccacgccgcggcgcccaaggccggcggcgaggcgcacgccgccaaccgcttcctcgtcgactggttcgcgtcgcgcccgctcgccggctccaccgccgccgccgccgcggcgccaacgccagggagcgccgcggaggacgaggcggccgggctgcgcctgtgctcgcacgcgctgtgcgggcggccggagacgcggcgccacgagttccggcgctgctcggtgtgcggcgtggtgaactactgctcccgggcgtgccaggcgctgcactggaagacggcgcacaaggcggagtgcacgcccatggaccggtggctcgacaacgccgccgccggcgccgccaaccccaatgccgccgccatggccgcgcccgccccatga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0385600, RefSeq:Os04g0385600