Os04g0386600

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Revision as of 11:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0386600| Description = Isocitrate lyase and phosphorylmutase family protein| Version = NM_001059157.1 GI:115458043 GeneID:4335655| Length =...")
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Gene Name

Os04g0386600

Description

Isocitrate lyase and phosphorylmutase family protein

Version

NM_001059157.1 GI:115458043 GeneID:4335655

Length

5022 bp

Definition

Oryza sativa Japonica Group Os04g0386600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19008880..19013901

Sequence Coding Region

19009169..19009287,19009379..19009415,19009565..19009780,19010541..19010663,19011067..19011348
,19012778..19012989,19013593..19013773

Expression

GEO Profiles:Os04g0386600

Genome Context

<gbrowseImage1> name=NC_008397:19008880..19013901 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:19008880..19013901 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgcgtagcccctacttcgtccccgagagcgaggggatccgggccggggagtcgccggccgcggcgctccgcaggatcctcgcgtcgccgggggcgcaccaggccccctgctgcttcgacgcgctcggcgcccgcctcatccagcgcgcggggttcccgatctgcttcatgggcggtttctgtgtttctgccgcacgacttggattgccagatgctggtctcatctcatatggagaaatggtagatcaagggcgtctgatcactgaagctgtatcactcccagttatcggcgatggtgataatggctatggaaatgctatgagcattaagagaaccgtaaaagggtatattaatgctggttttgctggaatcatgctcgaagatcaggtggcaccaaaagcatgtggacatactgaaggaaggaaagttatctcaagggaggatgctatcatgcacataaaagctgccgtagatgctaggaaagagagtggttctgacattgttatcattgcaaggtcagactctcgtcaagctatctctattgatgaagcgctatggagggtacaggcttttgccgatgctggagcagatgttctattcattgatgctcttgcttcaatagaagagatgaaagcattttgtgcggtttcacctaaagttccaaagatggcaaacatgctagaaggtggtggtaaaactcccatattgagccctgctgaacttcaggagattggttttagcctcgtagtctacccattgtccctgattggggtatcaatgctcgcaatggaggatgctctgattgcgataaaaagtactggtgcaccccgacctggtagcttgccatcttttcaggagatcaaggatactctagggtttaaccgatattacaaagaagaaaagcaatatgcaacagtccagcaagcccagccattatccacaaatattgtacttcgattaaagatcacagaaaaaagtggaacgcagaagataaatgaagggatacctgctggaatcctagagaagatatcaaaagctattccaggcttggctggtgtcaatttgacggaaatacttcagggtgcagatcagtcccagaaaggaaaattgctgcttgatcgtgaggatgcaactggcgacaggatccaggtgtccatcgagtga</cdnaseq>

Protein Sequence

<aaseq>MAARSPYFVPESEGIRAGESPAAALRRILASPGAHQAPCCFDAL GARLIQRAGFPICFMGGFCVSAARLGLPDAGLISYGEMVDQGRLITEAVSLPVIGDGD NGYGNAMSIKRTVKGYINAGFAGIMLEDQVAPKACGHTEGRKVISREDAIMHIKAAVD ARKESGSDIVIIARSDSRQAISIDEALWRVQAFADAGADVLFIDALASIEEMKAFCAV SPKVPKMANMLEGGGKTPILSPAELQEIGFSLVVYPLSLIGVSMLAMEDALIAIKSTG APRPGSLPSFQEIKDTLGFNRYYKEEKQYATVQQAQPLSTNIVLRLKITEKSGTQKIN EGIPAGILEKISKAIPGLAGVNLTEILQGADQSQKGKLLLDREDATGDRIQVSIE</aaseq>

Gene Sequence

<dnaseqindica>4615..4733#4487..4523#4122..4337#3239..3361#2554..2835#913..1124#129..309#agtcatccactccacaccaccacacactccccttcccttccttctccggtctcctccctctctcgtcgtcgtcgtcgtcgccgtcgccggctcgccgcgttctcctccgccgccgctgctgagccgggatggccgcgcgtagcccctacttcgtccccgagagcgaggggatccgggccggggagtcgccggccgcggcgctccgcaggatcctcgcgtcgccgggggcgcaccaggccccctgctgcttcgacgcgctcggcgcccgcctcatccagcgcgcggggttcccgatctgcttcatgggcggtgcgcatcgcctcgttcgctctccctcacgctcgcgcgcgctcgtttctgttcgtggttaaaaccttcgtgctgggggttttagtttggtggatgcgcacttgctccctggtcagcacgcaattattggatccaatcacatttagagcagattagctagtattagctaacagccgagtaggtgttatgcaaaattccactcatgaatcttgcaatttgcgaaacaataatcataagcgaactacagtcctgttgcatctttagaagtagatgtgaagtccacccatggaataagttaataactatgtggaaagcactccagatgttcggtattgatccaacgaaggagtacacaatggcgttttaatgcatgagaatggaagtgtcttaactttacaagacaatacgagcactggttgtttgttctatgaacacattgatttactcagtgaaaatggaaccagtatggagtctactcagtagttagtcttactgtaatatattttgcatatcgagccagtactagtttctctaaaggaaggttttggtatattctcaagacaattaatgcgttggagacttaatacttgtcatttgtttcaggtttctgtgtttctgccgcacgacttggattgccagatgctggtctcatctcatatggagaaatggtagatcaagggcgtctgatcactgaagctgtatcactcccagttatcggcgatggtgataatggctatggaaatgctatgagcattaagagaaccgtaaaagggtatattaatgctggttttgctggaatcatgctcgaagatcaggtatgcttcctaactcctaagtatcaccaaatgatcttctcatggattggctctctccgttgtcttaacaatctatggtcatatttgtaacattttttttatacattagaccttttggtgaacatcccttcatcctaaacttatgaatctcaattaatttgttatataaggctacaatttcctgtactgacatttgagatcacttttaatgttgagagctctactttctcagttccttgcttaatttttatgtatgaatatgttattcaatgttgggctgtatagtgtacaattctataggaattttactgtcgtatagctatggaagataccgtttggtggctaagattgggacatcagttccaaggcactgaattatgagaatttgtttagtaggagcctccctttagataggaaatcaagagcttcaataagtacatagtggagaggttgacaccagatgcctgatgtagggcgtgttgtggttgagcattgcttgtgggatgtattcttgggttgtattggggttgtttcattgagcccttcttagtactaatattttctttcttcttaatgagatgaaacacaactcatgtgtttttgagaaaaaaaaaagagagccacataataattaatatgcatcattgcacgtcacaatgggtgtttttttttgacgcaaacgtcacaatgggtgttgcaagggcaagaaagtaaagttaaagtattcactgtttcttttgaaaatccggccatagcagtgctccaacctaactatattgatctctccagtgagtgacacttactcctatttttttttttaaaaaaaagaactagaccggcaggggaatgactgtccccacggcttttcattaagaagaagccacaataaaactgactgagaaagccacgaaccctgctctgctccccacatgtggagtcacccactatggattggttcttgacacctgttttgatgaggggccagcgagtgactttttttaagtaggcctgcaattcgctcccttggggagtcgaacttagggcctagaggtgctacttgagcactgtaactgctaggctagaggtgctatttaaatattttaacttttatatatattcgtattgatctgtcctgtgatacttagtccaaattaagctatcatgttaacatcacagcctgagcacaaattcactaagctcaaatgttcaatctgttgagcacgactattgcattatgataaaaatgtttcacctacagtaattaaattatacttagttctttcacatatctgtgctattcaaactactgtagctactttattcattctagcttaatccattattgatatatgtgcagaagacttccaagattgatatttctttacctttttagtttccatgttaatgatatgacacatgatttttgaaggtggcaccaaaagcatgtggacatactgaaggaaggaaagttatctcaagggaggatgctatcatgcacataaaagctgccgtagatgctaggaaagagagtggttctgacattgttatcattgcaaggtcagactctcgtcaagctatctctattgatgaagcgctatggagggtacaggcttttgccgatgctggagcagatgttctattcattgatgctcttgcttcaatagaagagatgaaagcattttgtgcggtttcacctaaagttccaaagatggttagatgcactctgttcttttgccttttctagatacttgaaaatttgagataaccatgtaagagtttatagctattccaaggttctttgaatttcattaacaaaatagtggaatactctttcttggattgcactctatattttttctattgagctgaagttctgaacatgaacagcacaaccatgggtgtaaacccacttctaattggcaagttccatagattttcgcaaatttttcagtgtgcatagttgaagatgtaaccctaagctttgttatatcataatcatttataattactgctttcaaatgtcctcttctctatttgtctctgagctattagcctgttacttttctctagcattgaagtgaggagagtttatagccctgtattttgttctccaggcaaacatgctagaaggtggtggtaaaactcccatattgagccctgctgaacttcaggagattggttttagcctcgtagtctacccattgtccctgattggggtatcaatgctcgcaatggaggtttgttcattatgtttacagctcttatcctggacacttctgaatgtcctgcaaaattacttgcatgtctatattcgtttgagcaagggcgcatggtttttttttttaaaattcctgtttgttatttattctgcctgattgataattatttagttgtttcaatcttatttcactgcatttttttaatcctatggtacctctgtgtacatgtgatcttcctcaattaaggcccggtttagttcccaaaattttttgttttggggtgtcacatctgatatacggacacacatttgaagtattaaacgttgtctaataacaaaacaaattacagattccgccaggaaactgcgaaacaaatttattaagcctaattaatccgtcattagcaaatgtttactgtagcaccacattgtcaaatcattgcgtaattaggcttaaaagattcgtctcacaatttacacgccaattgtgtaattggtttttttttgtccacatttaatactccatgcatgtgcccaaacattcgatgtgatgggtgaaaagttgttttgggaactaaacagggcctaagttttgtttgatgccaatgtctgctactgtatgggggaaaaacatcagggaggagcctaacatctctcaatgcatgcacatattcacgtgccattgtgcatgagtacaagactagttacactcgttagctattcaatttggtgtggaatcactatttgtatttcataatacatgaatctttgatctgcaggatgctctgattgcgataaaaagtactggtgcaccccgacctggtagcttgccatcttttcaggagatcaaggatactctagggtttaaccgatattacaaagaagaaaagcaatatgcaacagtccagcaagcccagccattatccacaaatattgtacttcgattaaagatcacagaaaaaagtggaacgcagaagataaatgaagggatacctgtaagaaccaatcctgccttctctcactctcactcactctctctctctcatcattcagtgattcatcacatcttcaattttcttccaactgatgtagactccattttacaacttcttgtttgctttcttcccctttttttctgcaacaggctggaatcctagagaagatatcaaaagctattccaggtttgtagttctattcgcaaaccacatttaaacgagcaagtgtgcaacccatgtttgataatggccatatcttactatcgtcgtttcacaggcttggctggtgtcaatttgacggaaatacttcagggtgcagatcagtcccagaaaggaaaattgctgcttgatcgtgaggatgcaactggcgacaggatccaggtgtccatcgagtgatcaatgcctacatacattgcctagaagcatggatggccagtaatgtagggcaaatcgccttcaatattgaagcaaacgattttccaagttgtaatggtagccgtttagcgtagtaccttgaagtgttacttctgcgagttgggttttcctctttgcgttgccttgtggtgttaataatcctggattcctgtgttgattcaaataaaagaaacctatcatcaggggctttagaatgttcttttctgcagacctacggcaacaaatgccagggatcatgacagcaatcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0386600, RefSeq:Os04g0386600