Os04g0389800

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Revision as of 11:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0389800| Description = Similar to Acetohydroxyacid synthase| Version = NM_001059172.1 GI:115458073 GeneID:4335672| Length = 2185 bp| Defin...")
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Gene Name

Os04g0389800

Description

Similar to Acetohydroxyacid synthase

Version

NM_001059172.1 GI:115458073 GeneID:4335672

Length

2185 bp

Definition

Oryza sativa Japonica Group Os04g0389800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19190099..19192283

Sequence Coding Region

19190213..19192132

Expression

GEO Profiles:Os04g0389800

Genome Context

<gbrowseImage1> name=NC_008397:19190099..19192283 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:19190099..19192283 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gctgcccaaaccgggagggcaagtgcaacggcgacgcgacagggatcgtccacgcgtggatgctgccgcctgcacccgcgacagccgccgtcccacgcgcgagaggtgctcgacgacggtgtccctcgccgcgaccgcgaccgcgacaacggccacgcccgtgcgcgcgccggtccggacgcgggcgcccatggggcagcggaagggcgcggacatcgtcgtcgaggcgctggagcggtgcggcgtccgcgacgtgttcgagtacccgggcggcgcgtcaatggagatccaccaggcgctgacgcggtcgccggtgatccgcaaccacctgctccgccacgagcagggggaggccttcgcggcgtccgggtacgcgcgctcgtcggggcggccgggcgtctgcgtcgccacctccggcccgggcgccaccaacctcgtgtccgcgctcgccgacgcccacctcgactccgtcccgctcgtcgccatcacggggcaggccccgcgccgcatgatcggcaccgacgcgttccaggagacgcccatcgtcgagttcacccgctccatcaccaagcacaactacctaatcctcgacgtcgacgacatcccccgcgtcatcaacgaggccttcttcctcgcgtccacgggtcgccccggcccggtgctcgtcgacatccccaaggacatccagcagcagatggccgtgccgtcctgggacgcgccgatgcgcctcccggggtacatctcccggctgccgaagccgccggccgccaacctgctcgacgaagtcatccgcctcgtcggcgacgccgagaggcccgtcctctacgtcggcggcgggtgctccgcgtcgggctacgagctgcggcgcttcgtggagctgacgggcatcccggtgacgaccaccctcatgggcatcgggaacttccccagcgacgacccgctctcgctgcggatgctcgggatgcatggcactgtgtacgccaactacgccgtcgacaacgccgacctcctcctcgcgctcggcgtgcgcttcgacgaccgcgtcaccggcaaagtcgaggcgttcgcgagcagggccaagatcgtgcacgtcgacatcgacccgtcggagctcgggaagaacaagcagccgcacgtctccatctgcgccgacgtcaagctcgccctgcagggcatgaacgcgatgctggaagaacagagcgccgccgccgcgcgcaagaacctcgatttcagcgcgtggcgctcggagctggagaagaagaaggtcgagttcccactgggctacagaacgttcggcgaggagatcccgccgcagtacgccatccaggtgctcgacgaggtcaccaacggggaggccatcgtcgccacgggcgtcgggcagcaccagatgtgggcgacgcagcactacacctacaggaggcccaggcagtggctctcgtccgccgggctgggcgccatgggcttcggcctgcctgccgccgccggcgccgcggtggccaacccgggcgccaccgtggtcgacatcgacggcgacggcagcctcctgatgaacatccaggagctcgccatggtccgcgtcgaggacctgccggtgaaggtgatggtgctgaacaaccagcacctgggcatggtggtgcagtgggaggacaggttctacgacgccaacagggcgcacacctacctcggcaacccggcggcgaacggcggcggcgaggtgtacccggacttcgtgacgatcgccggaggcttcggcatcccggcggcccgcgtgacgaggaagggcgaggtccgcgccgccgtcgaggagatgatggcggcgccggggccgtacctgctggacgtcgtcgtgcctcaccaggagcacgtgctgccgatgatccccagcaatggcgctttcaaggacattatcgtcgacggtga</cdnaseq>

Protein Sequence

<aaseq>AAQTGRASATATRQGSSTRGCCRLHPRQPPSHAREVLDDGVPRR DRDRDNGHARARAGPDAGAHGAAEGRGHRRRGAGAVRRPRRVRVPGRRVNGDPPGADA VAGDPQPPAPPRAGGGLRGVRVRALVGAAGRLRRHLRPGRHQPRVRARRRPPRLRPAR RHHGAGPAPHDRHRRVPGDAHRRVHPLHHQAQLPNPRRRRHPPRHQRGLLPRVHGSPR PGARRHPQGHPAADGRAVLGRADAPPGVHLPAAEAAGRQPARRSHPPRRRRREARPLR RRRVLRVGLRAAALRGADGHPGDDHPHGHRELPQRRPALAADARDAWHCVRQLRRRQR RPPPRARRALRRPRHRQSRGVREQGQDRARRHRPVGAREEQAAARLHLRRRQARPAGH ERDAGRTERRRRAQEPRFQRVALGAGEEEGRVPTGLQNVRRGDPAAVRHPGARRGHQR GGHRRHGRRAAPDVGDAALHLQEAQAVALVRRAGRHGLRPACRRRRRGGQPGRHRGRH RRRRQPPDEHPGARHGPRRGPAGEGDGAEQPAPGHGGAVGGQVLRRQQGAHLPRQPGG ERRRRGVPGLRDDRRRLRHPGGPRDEEGRGPRRRRGDDGGAGAVPAGRRRASPGARAA DDPQQWRFQGHYRRR</aaseq>

Gene Sequence

<dnaseqindica>115..2034#gtgcctccaacctcgcggcacacgtgacacagacgctcgccgccgacacggtgacgtcgccatggctgccgccgccgccgccgcctcactctccgtctccgacgccgccgctaagctgcccaaaccgggagggcaagtgcaacggcgacgcgacagggatcgtccacgcgtggatgctgccgcctgcacccgcgacagccgccgtcccacgcgcgagaggtgctcgacgacggtgtccctcgccgcgaccgcgaccgcgacaacggccacgcccgtgcgcgcgccggtccggacgcgggcgcccatggggcagcggaagggcgcggacatcgtcgtcgaggcgctggagcggtgcggcgtccgcgacgtgttcgagtacccgggcggcgcgtcaatggagatccaccaggcgctgacgcggtcgccggtgatccgcaaccacctgctccgccacgagcagggggaggccttcgcggcgtccgggtacgcgcgctcgtcggggcggccgggcgtctgcgtcgccacctccggcccgggcgccaccaacctcgtgtccgcgctcgccgacgcccacctcgactccgtcccgctcgtcgccatcacggggcaggccccgcgccgcatgatcggcaccgacgcgttccaggagacgcccatcgtcgagttcacccgctccatcaccaagcacaactacctaatcctcgacgtcgacgacatcccccgcgtcatcaacgaggccttcttcctcgcgtccacgggtcgccccggcccggtgctcgtcgacatccccaaggacatccagcagcagatggccgtgccgtcctgggacgcgccgatgcgcctcccggggtacatctcccggctgccgaagccgccggccgccaacctgctcgacgaagtcatccgcctcgtcggcgacgccgagaggcccgtcctctacgtcggcggcgggtgctccgcgtcgggctacgagctgcggcgcttcgtggagctgacgggcatcccggtgacgaccaccctcatgggcatcgggaacttccccagcgacgacccgctctcgctgcggatgctcgggatgcatggcactgtgtacgccaactacgccgtcgacaacgccgacctcctcctcgcgctcggcgtgcgcttcgacgaccgcgtcaccggcaaagtcgaggcgttcgcgagcagggccaagatcgtgcacgtcgacatcgacccgtcggagctcgggaagaacaagcagccgcacgtctccatctgcgccgacgtcaagctcgccctgcagggcatgaacgcgatgctggaagaacagagcgccgccgccgcgcgcaagaacctcgatttcagcgcgtggcgctcggagctggagaagaagaaggtcgagttcccactgggctacagaacgttcggcgaggagatcccgccgcagtacgccatccaggtgctcgacgaggtcaccaacggggaggccatcgtcgccacgggcgtcgggcagcaccagatgtgggcgacgcagcactacacctacaggaggcccaggcagtggctctcgtccgccgggctgggcgccatgggcttcggcctgcctgccgccgccggcgccgcggtggccaacccgggcgccaccgtggtcgacatcgacggcgacggcagcctcctgatgaacatccaggagctcgccatggtccgcgtcgaggacctgccggtgaaggtgatggtgctgaacaaccagcacctgggcatggtggtgcagtgggaggacaggttctacgacgccaacagggcgcacacctacctcggcaacccggcggcgaacggcggcggcgaggtgtacccggacttcgtgacgatcgccggaggcttcggcatcccggcggcccgcgtgacgaggaagggcgaggtccgcgccgccgtcgaggagatgatggcggcgccggggccgtacctgctggacgtcgtcgtgcctcaccaggagcacgtgctgccgatgatccccagcaatggcgctttcaaggacattatcgtcgacggtgatggccggagttcgtattagttctgaacttctaatatatgggactatccgtacatttatcgtctaaaaatgtgttatctataaatatagtaccatagtaatgtaattacattgtaactatatataattgttctataactttcgttagttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0389800, RefSeq:Os04g0389800