Os04g0390000
| Gene Name |
Os04g0390000 |
|---|---|
| Description |
Similar to 2-oxoglutarate dehydrogenase, E1 component |
| Version |
NM_001059173.2 GI:297602610 GeneID:4335673 |
| Length |
6761 bp |
| Definition |
Oryza sativa Japonica Group Os04g0390000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:19196735..19203495 |
| Sequence Coding Region |
19197491..19198981,19199377..19199603,19199691..19200023,19200995..19201241,19201869..19201997 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:19196735..19203495 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:19196735..19203495 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>gtgaggaacctggcgcgtgctccggcgaacccttttgccggtcctgcgccacggtacttccactccacccgcccccggcggttcgccgctcctgtgccccgcgccgtgccgctctcgcgcctcaccgacagcttccttgatggcaccagcagcgtgtaccttgaggagctccagagggcgtgggaggctgatcccacctctgtcgacgagtcctgggacaatttctttcggaactttgtcgggcaggctgcaacttcgcctggcatatctgggcagacaattcaggaaagcatgaggttgctgcttcttgtgcgagcgtaccaggtgagtggtcacctgaaggctaagcttgatcctctcgcgctagaggagcggcctatccctgatgttctggaccctgcgttctatgggttctctgaggctgatctggaccgggagttttttcttggtgtgtggaggatggctgggttcttgtcggagaatcgccctgtgcagacactccgttctgtgttggagcggcttgagcaagcttactgtggtaccattgggtatgagtacatgcacatacctgacagggagaaatgtaattggctgagggataggattgagacggtcaatgcaagggagtactcctacgaccgtcgccaggtcatgcttgataggctcatgtggagcactcagtttgagagcttcttggcacagaaatggacgaccgccaagcggtttggtcttgaaggtgcggagacactgatccctggcatgaaggagatgtttgacagggcagctgatcttggtgtagagagcattgtgattggtatgccacacagaggtaggctgaatgtcttgggaaatgtcgtgaggaagcccttgcgacagatcttcagtgagtttagtggtggtaccaagcctgccgaagaaggggagggcttgtatacagggactggagatgtcaaataccatctaggaacttcatacgataggcctaccagaggtggaaagcatatccatctgtctctggttgcaaacccaagtcatttggaagcagtcgatcctgttgttgctgggaagaccagagcaaaacagtactattctaatgatcttgacaggaccaagaatttaggagtcttgttgcatggtgatggaagcttctcagggcagggtgtagtgtatgaaaccctgcatctcagtgctcttccaaactacactactggtgggacaattcacattgtggtcaataatcaggttgctttcactactgatccaagggcagggaggtcttcgcagtattgcacagatgttgctaaagcattggatgctccaattttccatgtgaatggtgatgacttggaggcagtggttcatgtctgtgagcttgctgcggagtggcggcaaacatttcattctgatgttgtggtggatattgtatgctaccgccggtttgggcataacgagattgatgagccttccttcacccagcctaaaatgtacaagataattaggaaccaccagagtgctcttgagatataccaaaacagacttttagaatctgggaagatatccaaggaagatattgataagatgcagaagaaggtcagcactatcttgaatgatgaattccaaaacagcaaagaatatattcccaataagagagactggctctcagcttactggactggattcaagtcaccagaacagatttcacgaatccgaaatactggtgtcaagccagagattctaaaacgtgttggagaagccatgactactctgcctgaaaatttcaagccccacagggctgtcaaaaagatttttgagctgcgtcgtcagatgattgagacgggcgaaggcattgattgggctgttggtgaagcacttgcttttgcaactcttataattgagggaaaccatgttaggttaagtggtcaggatgttgagaggggtacattcagccaccgccatgctgttatccatgaccaggaaactggagagcaatactgtccgcttgataatcttgttatgaatcaagatgaggaactatttactgtaagcaacagttccctgtcagagtttgctgttttgggctttgaattgggctattccatggagaatccaaactcactggttttatgggaagcccagtttggtgatttttccaatggagctcaagtgatatttgatcagtttctgagtagtggagaggcaaaatggctccgccagaccggtcttgtcgtttgccttcctcacggatatgatggtcaggggcctgaacattccagtgcaaggttggagcgtttccttcagatgagtgatgacaacccttatgttattcctgagatggatccaactctgaggaagcaaatccagcagtgcaactggcaagttgtgaatgtcacaactcctgcaaactatttccatgtcctgcgtcgccagattcaccgggacttcagaaagcctttgattgttatgtctccaaagaatctccttcgacacaaggactgcaaatcgaatctttctgaatttgatgaccttgctggtcaccctggatttgacaagcaaggaacccggtttaagcgtctaattaaagatcagaacaaccataaggaccttgaggagggaatcaagcgtttagttctctgttctggaaaggtatattatgagttggacgaagaaagaagaaaaaaggagcgtgatgatgttgctatatgtagagttgaacagctctgtccattcccatatgacctcatccagcgcgagttgaagcgatatccaaatgccgagattgtttggtgccaagaggaacccatgaacatgggggcgtacagctacatcaatcctcgcctcctgaccgcgatgagggcgcttggtcggggcacgatagacgacatcaaatacgttggaagggccccatctgcagccaccgcaacaggtttctactccgtccatgtgcaggagcaaaccgagcttgtgcagaaggcactgcagcgagaccctatcaactctccattttga</cdnaseq> |
| Protein Sequence |
<aaseq>VRNLARAPANPFAGPAPRYFHSTRPRRFAAPVPRAVPLSRLTDS FLDGTSSVYLEELQRAWEADPTSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLL LVRAYQVSGHLKAKLDPLALEERPIPDVLDPAFYGFSEADLDREFFLGVWRMAGFLSE NRPVQTLRSVLERLEQAYCGTIGYEYMHIPDREKCNWLRDRIETVNAREYSYDRRQVM LDRLMWSTQFESFLAQKWTTAKRFGLEGAETLIPGMKEMFDRAADLGVESIVIGMPHR GRLNVLGNVVRKPLRQIFSEFSGGTKPAEEGEGLYTGTGDVKYHLGTSYDRPTRGGKH IHLSLVANPSHLEAVDPVVAGKTRAKQYYSNDLDRTKNLGVLLHGDGSFSGQGVVYET LHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALDAPIFHVNGDDLE AVVHVCELAAEWRQTFHSDVVVDIVCYRRFGHNEIDEPSFTQPKMYKIIRNHQSALEI YQNRLLESGKISKEDIDKMQKKVSTILNDEFQNSKEYIPNKRDWLSAYWTGFKSPEQI SRIRNTGVKPEILKRVGEAMTTLPENFKPHRAVKKIFELRRQMIETGEGIDWAVGEAL AFATLIIEGNHVRLSGQDVERGTFSHRHAVIHDQETGEQYCPLDNLVMNQDEELFTVS NSSLSEFAVLGFELGYSMENPNSLVLWEAQFGDFSNGAQVIFDQFLSSGEAKWLRQTG LVVCLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDPTLRKQIQQCNWQVVNVTT PANYFHVLRRQIHRDFRKPLIVMSPKNLLRHKDCKSNLSEFDDLAGHPGFDKQGTRFK RLIKDQNNHKDLEEGIKRLVLCSGKVYYELDEERRKKERDDVAICRVEQLCPFPYDLI QRELKRYPNAEIVWCQEEPMNMGAYSYINPRLLTAMRALGRGTIDDIKYVGRAPSAAT ATGFYSVHVQEQTELVQKALQRDPINSPF</aaseq> |
| Gene Sequence |
<dnaseqindica>757..2247#2643..2869#2957..3289#4261..4507#5135..5263#5346..5561#5635..5758#6236..6474#ctctctctctctctctctctctctctctcgccaaccaatctcctcccccctcctttcctcctcctcccgaaccaccggaatccgacgcggcgccgccgcgccaccccgttccgccggctctcttcctcacctctcctccccaggagatcgtcaatctcctcggtaagcaagcaagcactcgggtggttcgagctgtgccctgcgatcgatccccttgcggagttgcgacgcgaatatggtgtctaagtttgatgttacgttagggtttggttggttcgtttgcggcggtgttggtgcctcgtgtgtgatgtgtgtgtgtgtgtgcgggggttaatttggttcgttcgtggatgggggggctgatctggcatcgtgacggtgtcggtgttaattgttaaacctttttcatttctgttccttaacttttgccgtgatgggggtgatcttggagcgctgcgctggtgtaaatcgggctagattttggaggaacgtcacagtgaaattcgtcaataatcgtgtcgttttcctgtcgaatttttggcgcacggtttgatgctgttggggacctaacctaacctcgtgttcttgatgcgatgcaggtcaggtgtttgatcgattgcctgtgggaagcatatgggcggttagattcgtgaagttgagaggaatcagaagacgggaattgtttgaggggactgaatttgatctggaaaatggggtggtttcgggctgcgtccggattggctcgggtggcgctgagtgaggaacctggcgcgtgctccggcgaacccttttgccggtcctgcgccacggtacttccactccacccgcccccggcggttcgccgctcctgtgccccgcgccgtgccgctctcgcgcctcaccgacagcttccttgatggcaccagcagcgtgtaccttgaggagctccagagggcgtgggaggctgatcccacctctgtcgacgagtcctgggacaatttctttcggaactttgtcgggcaggctgcaacttcgcctggcatatctgggcagacaattcaggaaagcatgaggttgctgcttcttgtgcgagcgtaccaggtgagtggtcacctgaaggctaagcttgatcctctcgcgctagaggagcggcctatccctgatgttctggaccctgcgttctatgggttctctgaggctgatctggaccgggagttttttcttggtgtgtggaggatggctgggttcttgtcggagaatcgccctgtgcagacactccgttctgtgttggagcggcttgagcaagcttactgtggtaccattgggtatgagtacatgcacatacctgacagggagaaatgtaattggctgagggataggattgagacggtcaatgcaagggagtactcctacgaccgtcgccaggtcatgcttgataggctcatgtggagcactcagtttgagagcttcttggcacagaaatggacgaccgccaagcggtttggtcttgaaggtgcggagacactgatccctggcatgaaggagatgtttgacagggcagctgatcttggtgtagagagcattgtgattggtatgccacacagaggtaggctgaatgtcttgggaaatgtcgtgaggaagcccttgcgacagatcttcagtgagtttagtggtggtaccaagcctgccgaagaaggggagggcttgtatacagggactggagatgtcaaataccatctaggaacttcatacgataggcctaccagaggtggaaagcatatccatctgtctctggttgcaaacccaagtcatttggaagcagtcgatcctgttgttgctgggaagaccagagcaaaacagtactattctaatgatcttgacaggaccaagaatttaggagtcttgttgcatggtgatggaagcttctcagggcagggtgtagtgtatgaaaccctgcatctcagtgctcttccaaactacactactggtgggacaattcacattgtggtcaataatcaggttgctttcactactgatccaagggcagggaggtcttcgcagtattgcacagatgttgctaaagcattggatgctccaattttccatgtgaatggtgatgacttggaggcagtggttcatgtctgtgagcttgctgcggagtggcggcaaacatttcattctgatgttgtggtggatattgtatgctaccgccggtttgggcataacgagattgatgagccttccttcacccagcctaaaatgtacaaggtatacattttttttcttacctgattaagtccagcatgatgccatgatttatgtttctttcgtctgaatattcatttcagtcctgttctttaatcctgtatgatgtctccagaactagtttatcttgatttcatccgtaatattctctctaccatatgagtgtgaatgtgtgatatctcaataacaccatagagtttatcaactaatagacaaaaaaagagatcaacttttgacttctgagtattttaccccattaagacctggaacaatttttttaatgtgttcagaaactattgtaagttagaaatgatactgattatggataattaaatgctggtattttccatggtacatttgtttgtttacatttggataattgtttgtatttgtatcagataattaggaaccaccagagtgctcttgagatataccaaaacagacttttagaatctgggaagatatccaaggaagatattgataagatgcagaagaaggtcagcactatcttgaatgatgaattccaaaacagcaaagaatatattcccaataagagagactggctctcagcttactggactggattcaagtcaccagaacagatttcacgaatccgaaatactgggtaaacaattctttacttctgatttttggacgattcctgtgtttcccctccatgttttgagtaagtagctttattgcaatcatgcagtgtcaagccagagattctaaaacgtgttggagaagccatgactactctgcctgaaaatttcaagccccacagggctgtcaaaaagatttttgagctgcgtcgtcagatgattgagacgggcgaaggcattgattgggctgttggtgaagcacttgcttttgcaactcttataattgagggaaaccatgttaggttaagtggtcaggatgttgagaggggtacattcagccaccgccatgctgttatccatgaccaggaaactggagagcaatactgtccgcttgataatcttgttatgaatcaagatgaggaactatttactgtaagcaacaggtatgaattatgatccaccgacacattatagtttggatgtttttttatatcgtgcaagtttagcttatgaattgtgcaagtataggtgaccaacaaataagaaaaaagaaatcaggtgattggcaaatagcaaagctgttgttggttatgtaagtggctgtcccacttgtacatgtacacacacaacacaagtacatatgttatcactgctcatcaaatatgccttgagctagttgcaaactttcaaatttcagatcaccatccttagcctttgcacgcatatcagggcgctttggacggctaagatagcacatgccctaatcccacatgtgacatggtagtacaagtaggtttttgtgctactccatttttactaaaacttctatctgaaatgcttaaggttcgacttgttagccttgggagttctactgccaatttatctgctgatcatgacactagtaatttgagcagcccacatattgctgctaggtatgaggtgctgtaggcacatgtaacatgtatgagatcattgctgggatattaaataagctttattttcgtgcattgtaagtactgagatgatggagataattctcggcaataaatattttgatttttttttatttaaaaggttggtttttacatctcacaattttctcaaactgtgcaaaaaataatttgaagcgaaatagaaaatttaaccaaggtctacatcatgttaacttacaaatttagtaagtaataattaagttaaatcagccttttgatgttctctatggagtctacttcgataggtgatactgcctccacttcattcatgattattatggtttaatccagatttattgttacatgatctggtactatttgaacttatgggatgcctccacttcattcatgattatttctttcctttatggttgatctggttttgttgttacataatctgatgtattcaagaatcttaacagttccctgtcagagtttgctgttttgggctttgaattgggctattccatggagaatccaaactcactggttttatgggaagcccagtttggtgatttttccaatggagctcaagtgatatttgatcagtttctgagtagtggagaggcaaaatggctccgccagaccggtcttgtcgtttgccttcctcacggatatgatggtcaggggcctgaacattccagtgcaaggttggagcgtttccttcaggtaccatttttctgtttctgactgcagaaatgtcgtcactagtatcttgtgttagtattagttgcattatcttatcatctgttgacataaaaggaacacaacataacagcactgcttttcacagtgttgctttctcataaactgtgttggcattgccatagttctacagttcatatattttgtataatatatgctgatgccatgtggtgatacaaagttgcggacttttaacacttcactgaaaattcagcattttttttgtttttgtttgtttattagttttccttttgtcataacttgatgactgcgcatagaaatattccgcactgtgactaaccatattatattgtactaactctacttttgacttggaaactgcaccacatcatccatttgtacatcatttattctgcaaggtaatggttgtacacatatgagaaatccatgtcatggatgattgtagttcccctacacttcagaaattgtctgtctggcaaaactagaaagaaatatatgactagaagaactttttttggctgtactatgaacttatttcccaatctgatgcgtgtgctgattttttaaattatctacatcttttttttaacttcaataattgcattgtagatgagtgatgacaacccttatgttattcctgagatggatccaactctgaggaagcaaatccagcagtgcaactggcaagttgtgaatgtcacaactcctgcaaactatttccatgtcctgcgtcgccaggtgaagtatcgtcatagtttttttctacttccctcctgcatgaccatcttcaagtgcatgaaagtatgtcttctatttctagattcaccgggacttcagaaagcctttgattgttatgtctccaaagaatctccttcgacacaaggactgcaaatcgaatctttctgaatttgatgaccttgctggtcaccctggatttgacaagcaaggaacccggtttaagcgtctaattaaagatcagaacaaccataaggaccttgaggagggaatcaagcgtttagttctctgttctggaaaggtaggcattttttcaacctgtacaatcgccgcttcaaaaagtcattatattacttatatttctattattacaggtatattatgagttggacgaagaaagaagaaaaaaggagcgtgatgatgttgctatatgtagagttgaacagctctgtccattcccatatgacctcatccagcgcgagttgaagcgatatccaagtatgttaaaacatgaaatagatcttgttcaaatatctacttcaagttgctatatagagtactcttctttataaaacatgcaaaagcatcagttcatcattgcaccgaggagagaaatatagggtactcttatcatcgcattcagtggtgatgatctagatggcatgagagcatggaatatagaggattgcagcatgcaagacaaaaggatcttatggaacaggagaggaaatatggaaatgataagagaacgatagataccagatgaagctacctgcaatcctatagcatggtccattaaccctaaaaggctgtagagaactaacttgttagctagaacatgttttccaggcattagcattttctaacccaagaagacaggaatcagaacagtaatttcatttgttctcctgatggatcctggtaaacaacaaatgagctaacaatatacaatctttgctgttttgtgccgtgtagatgccgagattgtttggtgccaagaggaacccatgaacatgggggcgtacagctacatcaatcctcgcctcctgaccgcgatgagggcgcttggtcggggcacgatagacgacatcaaatacgttggaagggccccatctgcagccaccgcaacaggtttctactccgtccatgtgcaggagcaaaccgagcttgtgcagaaggcactgcagcgagaccctatcaactctccattttgaacctgtagattttatttggatagccgtgggtaatcaaacctttgatccaacagcaaaattattgcctgtgcagccatttggtgaataatccgcttcggatgtttggtaccgcatgagagaaaccatttgaaacccatgttgggatgcatcattttgtgtttcttaacatcaaattaaaccaagttgcatccaatgcttacttgaggagtagaaataagtcgatgctgaatactgatcttccatgtttttgtgatactacattcttattactgcgcctttcaccatcc</dnaseqindica> 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| External Link(s) |
