Os04g0391900

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Revision as of 11:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0391900| Description = Amidohydrolase 2 family protein| Version = NM_001059181.2 GI:297602620 GeneID:4335683| Length = 3482 bp| Definition...")
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Gene Name

Os04g0391900

Description

Amidohydrolase 2 family protein

Version

NM_001059181.2 GI:297602620 GeneID:4335683

Length

3482 bp

Definition

Oryza sativa Japonica Group Os04g0391900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19304310..19307791

Sequence Coding Region

19304312..19304602,19304696..19304767,19305207..19305286,19305437..19305536,19305618..19305671
,19305781..19305858,19306391..19306488,19306586..19306643,19307070..19307191
,19307458..19307614

Expression

GEO Profiles:Os04g0391900

Genome Context

<gbrowseImage1> name=NC_008397:19304310..19307791 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:19304310..19307791 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gagaggagacgccatcaccaccaccactccaccttcaatggcagctcgctcgtgcaggttcctctactcctcctcctcctcccccatcgccaccacctccccgcgtgctctcccccaccccctccggctgccacgaggaggaagcttctgctctcctccacctgcggcacgatcgctccgcgccgccgcgtccgccatggaggggcagggcgccccgctgctcccggaggcaagggaagcgccatcgtcgtcgtcgactcccacctccacgtctgggcctccccgcagcaggcggcggagaggtacccgtatttccctgggcaggagccgccgatccgtggtgacgtcgacttgttgctccagtgtatggatgaagccggagtggacggagctctcattgttcaacctatcaatcatatgtttgatcactcattagttactagcgtgttgaagaaatacccatccaaattcattggttgctgtcttgctaatcctgcagatgatggaagcggcattaaacagcttgaacatctaattgtacaagaaaagtatcgtgctgtccggttcaaccccaacttatggccgtcaggtcaaaagatgacaaatgaggttgggaggtcattattcgctaaggctggagaacttggagcaccagttggaatcatggtgatgaagggaatcagtacatatattcaggagatagaggagctctgcacagattatccaaaaactactgttattttcgatcatatggctttctgcaagccaccaatgaacattgaagaagagaaggccttcacttcatttctagaactatccagattccctcagatttacgtcaaatacagtgcgctctttcgtatttcaagagaagcatatccatatgaggacacatctcagcttctttcccgtgtgatctctagctatggagcgaatcgaataatgtggggaagtgacttccccttcgttgttcctgaatgtggctacaaaggggccaaggaggcgatctctcatgtcgccggcaagatacctgtttcctcgtcagatttggaatggatcttaggcaaaacagtgacccaactgttccaaggtgcatgggtttctgcatga</cdnaseq>

Protein Sequence

<aaseq>ERRRHHHHHSTFNGSSLVQVPLLLLLLPHRHHLPACSPPPPPAA TRRKLLLSSTCGTIAPRRRVRHGGAGRPAAPGGKGSAIVVVDSHLHVWASPQQAAERY PYFPGQEPPIRGDVDLLLQCMDEAGVDGALIVQPINHMFDHSLVTSVLKKYPSKFIGC CLANPADDGSGIKQLEHLIVQEKYRAVRFNPNLWPSGQKMTNEVGRSLFAKAGELGAP VGIMVMKGISTYIQEIEELCTDYPKTTVIFDHMAFCKPPMNIEEEKAFTSFLELSRFP QIYVKYSALFRISREAYPYEDTSQLLSRVISSYGANRIMWGSDFPFVVPECGYKGAKE AISHVAGKIPVSSSDLEWILGKTVTQLFQGAWVSA</aaseq>

Gene Sequence

<dnaseqindica>3..293#387..458#898..977#1128..1227#1309..1362#1472..1549#2082..2179#2277..2334#2761..2882#3149..3305#gggagaggagacgccatcaccaccaccactccaccttcaatggcagctcgctcgtgcaggttcctctactcctcctcctcctcccccatcgccaccacctccccgcgtgctctcccccaccccctccggctgccacgaggaggaagcttctgctctcctccacctgcggcacgatcgctccgcgccgccgcgtccgccatggaggggcagggcgccccgctgctcccggaggcaagggaagcgccatcgtcgtcgtcgactcccacctccacgtctgggcctccccgcagcaggtgcgcgcgcgccctagccgttgttacttacattccccaatttttttgaaggtttgctttgctttacgggtggcgtgtaattcgcgcgtgcaggcggcggagaggtacccgtatttccctgggcaggagccgccgatccgtggtgacgtcgacttgttgctccaggttctcctccattcatcggtccctcgcaaaataataatcatctgcattcaatcttgtttcgtcttttgctagaaatgtctgtacatttggatgggtgatagccttgttggttggagaatttttcatgtttctgtcaaaaattttggggataacacttgagctgctcgatggacagtttttaacttgggaattgggactttatcgattgaggaagacatggctattcaattcctgtgatggacagaacctgaatatcacttagctgctaaaatagtgttgctaatttcagttgaaatatccatcctgttgattttttatccccaaatggtttggactaacatcatgggagtgatgaactgatgatagtcagtcttttgtggttataatagttaattggagatattgttttgaactctgttccctccctttttttttctagtgtatggatgaagccggagtggacggagctctcattgttcaacctatcaatcatatgtttgatcactcattagttactaggtaaatgtttcttgaatccatctgatctgaaactcatatggttttatcgataaaaagaagttcaattataggattctttctctgatatgttaatgcacataccaacacaataaactaggttataatttgttgattttgtttttgttgtagcgtgttgaagaaatacccatccaaattcattggttgctgtcttgctaatcctgcagatgatggaagcggcattaaacagcttgaacatctaattgtacaagtacataccttggaactttcccaaacctaaaaactggttcaaacctacagtctgatatatgattcatttgcttctcactaggaaaagtatcgtgctgtccggttcaaccccaacttatggccgtcaggtcaaaaggtttgtaggggcaactgtgctgtataaattttcatgttctcttgaatgttgattatcgtaaatgatttggacttcacaagtcagaacacaaaatgccttaaaattatagatgacaaatgaggttgggaggtcattattcgctaaggctggagaacttggagcaccagttggaatcatggtgatgaaggtaaaatgcattcctctgccacgatgcattgcaatgtgcatagacttgtcttcttagggtactcacaatgtgcaagtgttacatagtagtttaagattttgtatgaagttatctaattctaaaatgccaatgggagcaaaaagattagcagacaaggtgcaggctgggtttcgaagtaactgctgaaaataataacttctattgttacttgccaagtttttgccagctgattctaacatttgcatcagtcaggctctgaatggcacaactatgatcacaaatgtgaaattcttttgtatggaggtgatcattgctgaaagtctgactattcttctcctttcagaatactgttggtgccaccattgccattttacaataaagcctacattgtaacacttgcacgttttgagtaaagtaaaaggcatgttcttttggtctactaaggcctaggtactctagaacataaaaggaaatttcatatgttttcttttgtcattgttaatctattcgttcatgctctttgcacatgcagggaatcagtacatatattcaggagatagaggagctctgcacagattatccaaaaactactgttattttcgatcatatggctttctgcaagccaccaatgtaaactttttttatttgcttctcctgaactgtagtatttgtaatccttagccaagtgcttcttgtctgtgttaatgccatttccattgacatccaggaacattgaagaagagaaggccttcacttcatttctagaactatccagattccctcaggtacttcatgaaaccattccaaattaatggcttgtctaattctactttaaccatttacatgcaattctttcatagttaccaataacttctgaaaaaaatatttattgtaaatttaagctacctttggtacttgttgaagcctacattcttccgtttctcttatcagagatcatgggtcagtagctttgtttcctgaaccgtgaggtttagtactcgaggattaatagtatttatgcagtgatgaaattataggaacctaaatgaaatgaaagagattgatatgatctttagttcctattcaagtttgttggttgaagacggtattgtacaataagtttctcagctatgaaatggaatcagttccttctgtttgacaccgttacacttacactgaatcactgatgctataatgcttgacttgaacagatttacgtcaaatacagtgcgctctttcgtatttcaagagaagcatatccatatgaggacacatctcagcttctttcccgtgtgatctctagctatggagcgaatcgaataatgtggggaaggtaattcacaccttaagtgggaccttcattttaacatatgctctgcaactagtagtaccccaataagaagtcttctaaggaattatgctaataacactactattgatcaatcgattagtgttgaagtcttacaaaaccctccagtaagaataacataatccgcactcctattagaaatctgtaatggacacgaatagatgatctcttgcatgcttgcaaaccccagtacctgtataaacttcttatgctctgcacttattctgcagtgacttccccttcgttgttcctgaatgtggctacaaaggggccaaggaggcgatctctcatgtcgccggcaagatacctgtttcctcgtcagatttggaatggatcttaggcaaaacagtgacccaactgttccaaggtgcatgggtttctgcatgataggggtgtcattggttagtgtagcttttattggtcagtaaatatccttgcaatgagagggtgaaaaagattcttgtatgagaggaaaacggcgttatccagttaaagcattattctttctattcgctaattgataacctgtttaggttatccttttttgcaaggtattaaatgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0391900, RefSeq:Os04g0391900