Os04g0394700

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Revision as of 11:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0394700| Description = Conserved hypothetical protein| Version = NM_001059190.1 GI:115458109 GeneID:4335692| Length = 7214 bp| Definition ...")
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Gene Name

Os04g0394700

Description

Conserved hypothetical protein

Version

NM_001059190.1 GI:115458109 GeneID:4335692

Length

7214 bp

Definition

Oryza sativa Japonica Group Os04g0394700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19432462..19439675

Sequence Coding Region

19432676..19432786,19434118..19434190,19434314..19434391,19434650..19434711,19434831..19434899
,19435099..19435127,19435211..19435418,19435498..19435728,19436506..19436559
,19437771..19438719,19439280..19439290

Expression

GEO Profiles:Os04g0394700

Genome Context

<gbrowseImage1> name=NC_008397:19432462..19439675 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:19432462..19439675 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaatcgccattgcggaagttcaggggattcggtctccacagccacagggagaggaaggaccaccgcccgccgccggccaagctcgacgagctcgccgacgccgcccaggaaatggaggaaatgaggaattgttatgacagcttgctttcagctgcagctgcaacaatgaacagtgtatatgagtttgcagaagctatggaggaaatgggaacttgcttacttgagaaaactgcattgaattatgatgatgatgacagtggcagagttctgatgatgctaggaaaggcccaattcgaactgcagaagtttgttgataactatcgtacaaatatcataaataccatcacaaacccatcagagtcacttctcaaagagctacaagttgtagaggaaatgaaggaactctgtgatcataaaagacaggaatatgaagccatgcgagcagcctatagagagaaaggacggtcaaggcattccaaaaccgaaacattatcctcggaacagctgcaagcttattttcttgactatcaagaggatgcagcattgtttatattccgattgaaatcattgaagcaaggtcaattccgtagtattttaacacaggctgctcgccaccattctgctcagttgagttttttcaggcgagggttgaagtatctagaggctctggaacctcatgtaaaagcagttgctgagaaacagcacattgaataccctttaaatggactagatgacgacacagataatgatgagtacagctcttaccagggcaatcaaagtgatgacagtgagttaagttttgactatgagataaatgacagggataaggacttccccgcttccagaagttcaatggatttggatcagtctaatcaggcatgttccccagaacctctgaaggaacacaagcaggaatataccgaacaaatacaggcagattttgcagctcctcgagtgaagcttgagattggtacccaatcagcgccaatttctgctgacaatgtgtttgatccatctacaaggtttcggaaaatgaatacgtcaaacagaacaaattattcgtacaaactcccgacaccagatgatgacaagaactccacttcagcacacaccaatagatctcctcattcagatcaaccagaaagtaaatctcacgtagcagaaaatttatggcattcctctccactggtcaaaggttttaaaccaaactccatgtttagtggacctgttaagatgccatcaagtactgaagggatatcagcgccacttgtttatccctacgctacttcagattttaagaaaatgaagagggaagcattttccggtccaattccaagcaaagcaggattgaacaagcccttgttttctgctactgatctcagagcaccaatgaactatcctcgtgcaatgtcaacaaaatcatatggcccaggctggcagtcatccgtggctccaaaatttacccctaggatcacttcactcccaactacatcaccgagaataagtgagctacatgaactgcctaggcctccagcaaatgtaggtgctgcccgtcctggtttggttggatattctggccctctggtatcaaggcggcaggtgcctaatgtaccgacccgcgcctcaccaccatcacaaacagcatcacctcttccacggccacctgctgccatgacccgcagttattctataccttcaaatagccaaagaacacccattcttaccgtgaataagttgttggaagctaggcatagcagagagagtagtgaagtttcctctcccccattaacacctatatctttggctgatgtttcccgcagatcaacagcagaaacagctcttgaaaaaacaaggatgatggaaaccttgtga</cdnaseq>

Protein Sequence

<aaseq>MKSPLRKFRGFGLHSHRERKDHRPPPAKLDELADAAQEMEEMRN CYDSLLSAAAATMNSVYEFAEAMEEMGTCLLEKTALNYDDDDSGRVLMMLGKAQFELQ KFVDNYRTNIINTITNPSESLLKELQVVEEMKELCDHKRQEYEAMRAAYREKGRSRHS KTETLSSEQLQAYFLDYQEDAALFIFRLKSLKQGQFRSILTQAARHHSAQLSFFRRGL KYLEALEPHVKAVAEKQHIEYPLNGLDDDTDNDEYSSYQGNQSDDSELSFDYEINDRD KDFPASRSSMDLDQSNQACSPEPLKEHKQEYTEQIQADFAAPRVKLEIGTQSAPISAD NVFDPSTRFRKMNTSNRTNYSYKLPTPDDDKNSTSAHTNRSPHSDQPESKSHVAENLW HSSPLVKGFKPNSMFSGPVKMPSSTEGISAPLVYPYATSDFKKMKREAFSGPIPSKAG LNKPLFSATDLRAPMNYPRAMSTKSYGPGWQSSVAPKFTPRITSLPTTSPRISELHEL PRPPANVGAARPGLVGYSGPLVSRRQVPNVPTRASPPSQTASPLPRPPAAMTRSYSIP SNSQRTPILTVNKLLEARHSRESSEVSSPPLTPISLADVSRRSTAETALEKTRMMETL </aaseq>

Gene Sequence

<dnaseqindica>215..325#1657..1729#1853..1930#2189..2250#2370..2438#2638..2666#2750..2957#3037..3267#4045..4098#5310..6258#6819..6829#gaattctctctctcctccatttttgtgagtttttttttgttgtttttttttttttggtctcgcgaaatccaaagacccaagaacaaccaaaaaggccaatccttttctcctcctcctcctccatctccatctcctcttcgagtcctcgtcgtcgtggtggtcgtcggaggtggtattcttgatttgattcgaggaggcggggggggggggggagatgaaatcgccattgcggaagttcaggggattcggtctccacagccacagggagaggaaggaccaccgcccgccgccggccaagctcgacgagctcgccgacgccgcccaggttctttgcttttgcttctctccttccttcccttgtttgtttgtttctttttctttttcttttttccatccccaacccgcggagagatgcgactgcgcgccaaaatcggatcgccgggttcttgccttgcccgatcgaaaaggaaaatccgctatctttttcttcttcttcttcttatttttcttgccgcttgtttgatacatcggagaggtgttgttattttggtggttgtttgggattggatacatgagtcaaaacctgaaacctcctgttcattttctctgaaatttactcatcaggaacaaaatcccacccaaaaaaaaaagtatgcaaccttattgtttcatttcatctagtattaccaaaagaatattgttaccacaagttataatgtgtggagcgtgtgaacgttgatttttgcttttgtgtggtgctgtggttatttagaagagttcgttctctgtgagtcggctcttgatggtggtcaaagtccacggcaggaagcttgggatcggtgaaagttgctgtctagaaatggtctcaagtcagcaattcaaagtcattggagaggaacatatgctttgtttgtgttagcattggccgtcggggttcgtctattcaagatcattattttaggagagctcagtcatgccagcatatatattccacttcacctgcagtcttatctgctaccccgttttcgaagtgggatctgctatcccattgatgatgatggagtttgaatcttcatttaagaaattattatggtcagagctatttgaacttcggatagtgattttagtcctgtttaagacattgtctggattatatatatgtggaacattatctaaaaaatatacatgtggaattgtggattaggactgtaagaaagtcttgtggtccattttgttgtgtgaagttttgggctagtaaccactggttgagactctgtcttgttgaggatagtgacggagaatattaaaatataatgatatagcaaagataaataaatgttggaaggttttgtttatggacactgttttttgatggttacagtaaccatttcttttacccagtgcatgctgctagcaaacagtggattgtaatacagtagtatgctgtactgtagtttgtcttcttttcaatgtattctaattgatgcagcatatccaaactcataacataatagagttgtttctttgttttgttagttctcaccaaatgttatctcactaacaagtgcaaaacgtatcaatctgacatggtaaaggtgcatttttttttatgctgcatgcttataacttatatattcttttttttctcctttgcaggaaatggaggaaatgaggaattgttatgacagcttgctttcagctgcagctgcaacaatgaacagtgtatatggtaggttatgatcttttcatatgtgaagttacatttctaataaacaacattgcctccattggtataacggaatagcttattcatgtaacagtttcataattagttgtaatcaaacacatgcagagtttgcagaagctatggaggaaatgggaacttgcttacttgagaaaactgcattgaattatgatgatgatgacagtggtgagttgtctgggtctatacgctataagatgtggaagcttgtaagggagcaattattattagcggtgtttgtaggacagtacatttctagacatagagttggtctggcatgtttccacacttctgtttttccttcgaaattgccaggctgttcattaagatcatcaaatgaagaattcctgtgttattttttccttagttatagaagtatttggtcttctttgctgtatttattttgttttgcacttttacctgcaggcagagttctgatgatgctaggaaaggcccaattcgaactgcagaagtttgttgataactatgtaaatttctttgctactcttgtaaaactgcactgaaatttagtctcacacctgtttaagagaatcacaattttttccaaactttgttaagtctgactatattttattaatgttttcagcgtacaaatatcataaataccatcacaaacccatcagagtcacttctcaaagagctacaagttgtagaggttcgatctatttcagttttcccctgatccttcctaagtattgtacattatggatgctcatattcaagcaggattattgttaatttggtgccatatattactcatatttttttctgaataaaaatgagttacattccttttgcttaatttgtgatttttataatatgatgtcgtttacattgcattcttactgacgcaggaaatgaaggaactctgtgatcataaaaggtacacaatctacttgaatttaatcacatgtatattgcttctgtggtctcttctaaatgctaccatattattttgggcttcagacaggaatatgaagccatgcgagcagcctatagagagaaaggacggtcaaggcattccaaaaccgaaacattatcctcggaacagctgcaagcttattttcttgactatcaagaggatgcagcattgtttatattccgattgaaatcattgaagcaaggtcaattccgtagtattttaacacaggctgctcgccaccattctgctcaggtactttaacactacttcacataaaactaatattgactcacacacagtagcatgcacttaccattatttggacttttagttgagttttttcaggcgagggttgaagtatctagaggctctggaacctcatgtaaaagcagttgctgagaaacagcacattgaataccctttaaatggactagatgacgacacagataatgatgagtacagctcttaccagggcaatcaaagtgatgacagtgagttaagttttgactatgagataaatgacagggataaggacttccccgcttccagaagttcaatggatgtaagccatcctttttccaactgacctctcattttgcaattgatatttcgtttactcaaatcttattaatccaatctcacttgtttgtgctaacatgtaaaatctgtaatattccccaatttaagcacctcatgaagaatattcatgcgctgggtcattcctcatccccttttcttttagtgtggtcaaatctatttagcatgcgcttgcaggcctgctgtgagcataaggttgggtttactgcaattttgaccttgatgaattacatagtgatagtgcaatgattatggaagcttgttttagatttcatgttaatggtcagcaaactttatatattttcctgttaaacttatgtttcaaatatttatgctttagatcttactgttatagccctccatcgctggatagtagatacagtagcaccagattttagtgtaaattggggaggattaatgtgaatttttggaagagtagaactagagaatagaagcagaggagccaagggagagcaaggcagtaagtctgatatgggccatccctctcttgccaaggtgcttttagatgcaaccccgtttgacctgcattggctatgattcacaccagcaagacccaaattcttcaatgtctggcctgattccaatacttggaacatccatggcagttggtcaccagtattttccagttttgtgttttaatctgtgtaaatatgcatgttctatctcctcgttttcttatcctctaaatttgattgaaacaacctatttattctttctgtagttggatcagtctaatcaggcatgttccccagaacctctgaaggaacacaagcaggtaatcttcagctcgtagttatgctattgtataattttctggctaatgagtctattcttatacatattgcaaagcattatccagggtgagcatatagaaagagcaagtgttgcatggatatattttttgttaattggaagtggatctgtttccatatccaacctatctctaacttctctgtttgttcctctaatacccctacggccctactaatgttttcagtattctattgcatatgagtgttttgggtatatgcattggttgaaatgtagtttcatctagaatgttctgggggataaatctgtcccttagtcgtatatttgcttgtcttataagatgcctctcttcgcatgatgattccatagaggtgattgacatagttaaaagcaggcctacagtacattcagatgtctggattttctaaccttggactgtggtcttgcttcattgcttcagacaactgatctataaacaaaaaaggagtcttgcgcagctagctagatcctaccatggcatcttgaccaccagaaaccaaacaacacaatattgttctagcattattgtgtagtattttcattcttattctgtcactagcttctacctctgccatataaactatcaggaccaagtgccagccgacctgatgttcttatgcacactgctcacctgatacataacatctgttaatgttgaaatcttgataaaataatatagaagggtattatggtgggcatgcttattacttaagtgatgatggcaataaatttgataaatgcataccttgttcattaccactgtgtacatccattccttgcttattgctactggatggaacaagaatgtccatacctgcagttactgcatgtggtgtaatatgggtatggaagcttccagtaattgcctatctaagcctacaagttattatcactatagtatcttagtggtgtgcttatcgactatcaaacaagaacttcttgtttataattgtatacaatttcaccgttcccattatttcgacataatgttacttttgaagcacattgaccagacctggagcacattgatctgaaccttttgctatctcattactagaccaggatctgtttaagatctttgcttccatatttcatatctctgttattttcttatttgcaatgctgcatcatgagcatgtcctcaagtgttttgaaatggtatttgtttatgcacaggaatataccgaacaaatacaggcagattttgcagctcctcgagtgaagcttgagattggtacccaatcagcgccaatttctgctgacaatgtgtttgatccatctacaaggtttcggaaaatgaatacgtcaaacagaacaaattattcgtacaaactcccgacaccagatgatgacaagaactccacttcagcacacaccaatagatctcctcattcagatcaaccagaaagtaaatctcacgtagcagaaaatttatggcattcctctccactggtcaaaggttttaaaccaaactccatgtttagtggacctgttaagatgccatcaagtactgaagggatatcagcgccacttgtttatccctacgctacttcagattttaagaaaatgaagagggaagcattttccggtccaattccaagcaaagcaggattgaacaagcccttgttttctgctactgatctcagagcaccaatgaactatcctcgtgcaatgtcaacaaaatcatatggcccaggctggcagtcatccgtggctccaaaatttacccctaggatcacttcactcccaactacatcaccgagaataagtgagctacatgaactgcctaggcctccagcaaatgtaggtgctgcccgtcctggtttggttggatattctggccctctggtatcaaggcggcaggtgcctaatgtaccgacccgcgcctcaccaccatcacaaacagcatcacctcttccacggccacctgctgccatgacccgcagttattctataccttcaaatagccaaagaacacccattcttaccgtgaataagttgttggaagctaggcatagcagagagagtagtgaagtttcctctcccccattaacacctatatctttggctgatgtttcccgcagatcaacagcagaaacagctcttgaaaaaacaaggatgatgggtaagtttctactgattaatagtgtttctcaacatatttctccataatcatgataacttgcctataatcccataagagtttgttttctttccaagtttgatggaaatcaatatttgtgctgaaactgtggatgattttgtgattcataatgtttcaaacatttttgtttcttttttacagtaagaacataacaagcaatgaaaggcaaaataattatgaactgttatatcatgtatcaggtgcatactgcataatcatattaagtttgcactttataaatacattttactctgcgaattgttgacatatatccttttaaataccctctgcattgccttcattgcattattagtatcaactttagcatctctgagtttttaggcaaaacatttgtatgcgacaaagatcatagtatttcctgctacttcaaaaatccaagcactctacaatctcaattagacaagcctccaatgggcagatatattccatctttactgttaaaaataccaataaaacaatttctgatatgatattaactattttctcaactttgattgcagaaaccttgtgaaaacttgcatggccaaacttcagtcatcataggcaattttgtatgtaattatttgtgcattctagattgccctctgtaaatttatgtttcttgcgaaggaaaaagttgaaataaaggcgcactggttggaagatttttgtttctttggccggcttttctgacaaccttatggatttagtgaatctgactactattagtttaccatcactcactcaatattctgatttttttggggggattgctgatgtgaactatattggcgctgtaaatacattattacctttaccattttctttgtttgaaacaaaaacatgtgtttctcctatgtatttccaggaccaaaagaacgatgtcgaaattgtatatattgagtttgagctgtgct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0394700, RefSeq:Os04g0394700