Os04g0395600
| Gene Name |
Os04g0395600 |
|---|---|
| Description |
Similar to TRANSPORT INHIBITOR RESPONSE 1 protein (F-box/LRR-repeat protein 1) |
| Version |
NM_001059194.1 GI:115458117 GeneID:4335696 |
| Length |
4435 bp |
| Definition |
Oryza sativa Japonica Group Os04g0395600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:19474745..19479179 |
| Sequence Coding Region |
19475897..19476676,19476778..19477273,19477884..19478335 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:19474745..19479179 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:19474745..19479179 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacgtacttcccggaggaggtggtggagcacatcttcagcttcctgccggcgcagcgcgaccgcaacacggtctcgctcgtctgcaaggtgtggtacgagatcgagaggctgagccgccgcggcgtcttcgtgggcaactgctacgccgtgcgcgccggccgcgtcgccgcgcggttccccaacgtgcgggcgctcacggtgaaggggaagccccacttcgccgacttcaacctcgtgccccccgactggggcggctacgcggggccgtggatcgaggcggccgcgaggggatgccacggcctggaggagctcaggatgaagcggatggtggtgtccgacgagagcctcgagctgctggctcgctcgttcccgcggttcagggctcttgttcttatcagctgcgaggggttcagcactgacgggctagccgccgtcgcgagccattgcaagcttctgagggagttggatttgcaggaaaatgaagtggaggatcgagggcctaggtggctttcctgcttccctgattcctgcacatcacttgtctcattgaattttgcctgcatcaaaggggaggttaatgctggttcactggagagacttgttagcaggtccccaaacctgcggagtttgaggctgaatcgatctgtatcggtagatacacttgcaaagatactactgcgtacccctaacttggaggatttggggacagggaatttgacagatgacttccaaactgagtcctactttaagcttaccagtgctctggagaaatgcaagatgttgaggagtttgtctggattctgggatgcttctcctgtttgcctgtcatttatctaccccctgtgtgctcaactgacaggattgaacttgagctatgcccccacacttgatgcttctgaccttacaaaaatgattagccgctgtgtgaagctccaacgcctttgggtactggattgtatctcggacaaaggcttgcaagtggtggcctccagttgcaaagacttgcaagaactcagggtatttccatcagatttctacgtagctggttattctgcagtgacagaggagggacttgttgcagtatccttgggctgtccaaaactgaactcactactgtacttctgtcaccaaatgactaatgctgcactagttactgtcgccaagaactgtccaaatttcacacgattcagactttgtattcttgagccagggaagcctgatgttgtgacaagccaaccattagatgaaggctttggagctattgttcgtgagtgcaagggattacaacgtttgtcaatatctggtcttctcacagacaaagttttcatgtatattgggaaatatgcaaaacaacttgagatgctttctatagcatttgctggtgacagtgataagggtatgatgcatgttatgaatggatgcaagaatttaaggaaactggagataagagatagcccgtttggtgatgctgcactcttggggaattttgctaggtacgagacaatgcgatccctttggatgtcatcttgcaatgtcacgttaaaggggtgccaagtccttgcgtcaaagatgccgatgctcaatgttgaggtcataaatgagcgggatggtagcaatgaaatggaggaaaaccatggagatctgcctaaagtggagaaattatatgtgtaccgcacaactgctggggcgagggatgatgcaccaaattttgttaaaatcctatag</cdnaseq> |
| Protein Sequence |
<aaseq>MTYFPEEVVEHIFSFLPAQRDRNTVSLVCKVWYEIERLSRRGVF VGNCYAVRAGRVAARFPNVRALTVKGKPHFADFNLVPPDWGGYAGPWIEAAARGCHGL EELRMKRMVVSDESLELLARSFPRFRALVLISCEGFSTDGLAAVASHCKLLRELDLQE NEVEDRGPRWLSCFPDSCTSLVSLNFACIKGEVNAGSLERLVSRSPNLRSLRLNRSVS VDTLAKILLRTPNLEDLGTGNLTDDFQTESYFKLTSALEKCKMLRSLSGFWDASPVCL SFIYPLCAQLTGLNLSYAPTLDASDLTKMISRCVKLQRLWVLDCISDKGLQVVASSCK DLQELRVFPSDFYVAGYSAVTEEGLVAVSLGCPKLNSLLYFCHQMTNAALVTVAKNCP NFTRFRLCILEPGKPDVVTSQPLDEGFGAIVRECKGLQRLSISGLLTDKVFMYIGKYA KQLEMLSIAFAGDSDKGMMHVMNGCKNLRKLEIRDSPFGDAALLGNFARYETMRSLWM SSCNVTLKGCQVLASKMPMLNVEVINERDGSNEMEENHGDLPKVEKLYVYRTTAGARD DAPNFVKIL</aaseq> |
| Gene Sequence |
<dnaseqindica>2504..3283#1907..2402#845..1296#acccccaccaccaccactctccccgcctccgcctccgcctccgccgccgccgccgccgtcctcctcttctcgcggtcgctgcgtcctcgcctcggggctcggcccgtgctgccgccgttacgcgtgggctgatttcctcctcgcttccacgtacgccatctaggaagaggacggttgcgcgcgcggcggcggcgcggcgcgtgatctccgccgggggaggaggaggaggcgggggttgatgggttagatctggcggtttccgggcggcgtggatctgaaaccgtggtggaggtggtaggttttttcgttcgcggattcctttttgctgttctgctcgtttccattttctcgcaagcggagattggagctggagctgacgaggtgtggtgttgggtgtgggggttttttcctcgctgatctcgtgcatgcaggtttggtttcggttcggggaggtcgccatcgttgctcctcgttttggccttgtgcccatttggagtcagccagctcgtgtgcggggaggaagcctctcatgtccaaaataggggcatgggtgtcggatgcggtaactgcccccctgttgcttcgcttccttccagatctgaaacccatgtgaatgctgctcctgctgctactttgagatagagcattgcgtgttcttggattggtggatgatgaggtgaaagtgaagagggggagagtgtgtttcctgtttgtgagagatttttttctctgaataaacctggagccgtggaggaggaagcagatcctatcgtgtagctcccgcggcggcggctgcggtggtggtggggaagaggaagaagaaggcggtggcggcggcggagccatgacgtacttcccggaggaggtggtggagcacatcttcagcttcctgccggcgcagcgcgaccgcaacacggtctcgctcgtctgcaaggtgtggtacgagatcgagaggctgagccgccgcggcgtcttcgtgggcaactgctacgccgtgcgcgccggccgcgtcgccgcgcggttccccaacgtgcgggcgctcacggtgaaggggaagccccacttcgccgacttcaacctcgtgccccccgactggggcggctacgcggggccgtggatcgaggcggccgcgaggggatgccacggcctggaggagctcaggatgaagcggatggtggtgtccgacgagagcctcgagctgctggctcgctcgttcccgcggttcagggctcttgttcttatcagctgcgaggggttcagcactgacgggctagccgccgtcgcgagccattgcaagtgagtgcttcagattcttttatgtttcaatcgctgctgtgagcttgtgatattcttctctgctttggcaatgtagtttgtagttgcatactctctgcagtttagagttgaatggatcgattttgatctgttgaatttcatacatcttttagctacaggttcttgctaatcatagaacatagggggttaggggggacctttgcagtgtttgaaggaacaagatgcatctggcatttctatattctgttcgaactttgttttacatcgaggcattcatcttctgtgatgtttcattgtgttcttttttacttgtacagagcaattctaaattgaagtgcatgtgattattaccacttccattattggctttcttctgtgattgttgtttactagatgaattggtattcttgtggccgttgttctatattgaaccaactggcatgagctttattgttgtggccattttctttagactacttgctagggatggatgcaaattctgtttaggttactgaataacttactgttgctttggttttaatttgttatggttacactcatttttatggcttatatgctgacactgttttcttctctttctgttgcctaggcttctgagggagttggatttgcaggaaaatgaagtggaggatcgagggcctaggtggctttcctgcttccctgattcctgcacatcacttgtctcattgaattttgcctgcatcaaaggggaggttaatgctggttcactggagagacttgttagcaggtccccaaacctgcggagtttgaggctgaatcgatctgtatcggtagatacacttgcaaagatactactgcgtacccctaacttggaggatttggggacagggaatttgacagatgacttccaaactgagtcctactttaagcttaccagtgctctggagaaatgcaagatgttgaggagtttgtctggattctgggatgcttctcctgtttgcctgtcatttatctaccccctgtgtgctcaactgacaggattgaacttgagctatgcccccacacttgatgcttctgaccttacaaaaatgattagccgctgtgtgaagctccaacgcctttgggtgagttcccttgttggtttgtacttattcttgtttgttgttgttgttgttgccctttggtaatatcaagcaagtaacggtattgagcctttatattgcaggtactggattgtatctcggacaaaggcttgcaagtggtggcctccagttgcaaagacttgcaagaactcagggtatttccatcagatttctacgtagctggttattctgcagtgacagaggagggacttgttgcagtatccttgggctgtccaaaactgaactcactactgtacttctgtcaccaaatgactaatgctgcactagttactgtcgccaagaactgtccaaatttcacacgattcagactttgtattcttgagccagggaagcctgatgttgtgacaagccaaccattagatgaaggctttggagctattgttcgtgagtgcaagggattacaacgtttgtcaatatctggtcttctcacagacaaagttttcatgtatattgggaaatatgcaaaacaacttgagatgctttctatagcatttgctggtgacagtgataagggtatgatgcatgttatgaatggatgcaagaatttaaggaaactggagataagagatagcccgtttggtgatgctgcactcttggggaattttgctaggtacgagacaatgcgatccctttggatgtcatcttgcaatgtcacgttaaaggggtgccaagtccttgcgtcaaagatgccgatgctcaatgttgaggtcataaatgagcgggatggtagcaatgaaatggaggaaaaccatggagatctgcctaaagtggagaaattatatgtgtaccgcacaactgctggggcgagggatgatgcaccaaattttgttaaaatcctatagagctagctgagagtagcaaggaatcctcttattccataaggtaacccctttcaatacattattttcaaagtgcctttctatagttaatgagtttgcctgttactctgttagcctattaatactagtgctgtttgaacttgcatcgttttttttttgtaccttggctcgttttggtcactagatccttttattctcattgcatgccccattgcctctcaacatgaaaactaggagtatctggtggctcttgtagctcactctgttcagatataatttgcttagctcaggactgactttgaacgattcatgtcagcctgcatttttttttccaagataaaattaacagtttatccttaaacttctatacaaaatcaattctgcatgaggaagcttctgctatgataaaatccaaagtgtaaattaaggctgattcctgaaaagattgaactgggtataatagtacttgcaacatgatgctttgagcaaacctttattctgcgtcaatctttatccactctttttgttttctttccgcccccggtacagatcgtagctactcatagctctaaaattcccctcaacgcgattgttaccgttcagtttgggatagggggctttgccagatgagcatgagcccccatctaacccccactcgattgctcttgcagatggtcggcggaatctgggaggaggccggggccgcggcaacagtggtaagctcttcaagtgtctcctcctctcctttgcagggacaggaaaaaccacgttggtgtgcctcccttatctcggagcatctggcctgggatcatcatccatcatccccccgtttcgccttttagcccgtttggtcataccgacgaggcccttatcctgttgtgcaattctgagcaagctcaggaccaccaccaatccatcatgttagctcgaccttttctctcttcttccctttattattttttcttctttttttaccttgtgtaatatgtagaacccacttccatttgcttttgacatttgccacagcggattgtgctgctgctggttgtaatgcttgttttcaagcctcctgaccgggacgtttcggggacgatgattagtttccttctctttgctcctgtgaatgcagtcagtgcctggaataatttctgcttc</dnaseqindica> |
| External Link(s) |
