Os09g0571500

From RiceWiki
Revision as of 07:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0571500| Description = Lipase, class 3 family protein| Version = NM_001070529.1 GI:115480800 GeneID:4347921| Length = 2502 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0571500

Description

Lipase, class 3 family protein

Version

NM_001070529.1 GI:115480800 GeneID:4347921

Length

2502 bp

Definition

Oryza sativa Japonica Group Os09g0571500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23642918..23645419

Sequence Coding Region

23643167..23643468,23643612..23643751,23644014..23644084,23644187..23644387,23644471..23644743

Expression

GEO Profiles:Os09g0571500

Genome Context

<gbrowseImage1> name=NC_008402:23642918..23645419 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23642918..23645419 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttcgcaagaggaacgttctcaaattcgtcaaggactccagtattctcagacctggctattacattgccattgatccacgcactaaattggtcatccttgggattcgtgggactcacactgtttatgacctagttaccgatttgattgctctaagcgataagaaggtatcacctaaaggtttctcgacacactttggaacatatgaggccgcccgttggtaccttcgccatgagttgggacttatcagaaagtgtttggaaaagcataaggattacaagttgcgcctggtagggcactcccttggaggtgcttcagccgcgttgcttgctataatgctaaggaagaagtcaaaggaagagcttggatttagtcctgacgttatatcagctgttggatatggaaccccgccttgtgtctcaagagaaattgctcaaagttgtgcaagctatgtttcaactgttgtactgcaggatgatatcatccctagattaagtgcagcttcactggcaagattgcgagccgaaatactcaaaacagattgggtaagtgttttggaaaaagaagactggaagcatatagtggacattgtgactaatgctaagcttgtagtttcgtcaattcaagatgtggcgcgcaagcttgctgattatgctaaaattgtcacagtatcaactagttctgatgccatcaaagatcaagatcgccccctgagcaccagtgaagtattgtcaccggatagtaaagaggatgtatttgtgccagaagatctgttccttcctgggactctgtattacctcaagagggacattgaggatataaacggtgtagaagatgagtcgtatacactctggagaggtgatgccggggagaattttcagaggatactgttatctggcaatctgatatccgatcacaaatgtgaaagcatatattacgccctgagggatgtgctcaagactctgccgccccaggaatcaggatga</cdnaseq>

Protein Sequence

<aaseq>MLRKRNVLKFVKDSSILRPGYYIAIDPRTKLVILGIRGTHTVYD LVTDLIALSDKKVSPKGFSTHFGTYEAARWYLRHELGLIRKCLEKHKDYKLRLVGHSL GGASAALLAIMLRKKSKEELGFSPDVISAVGYGTPPCVSREIAQSCASYVSTVVLQDD IIPRLSAASLARLRAEILKTDWVSVLEKEDWKHIVDIVTNAKLVVSSIQDVARKLADY AKIVTVSTSSDAIKDQDRPLSTSEVLSPDSKEDVFVPEDLFLPGTLYYLKRDIEDING VEDESYTLWRGDAGENFQRILLSGNLISDHKCESIYYALRDVLKTLPPQESG</aaseq>

Gene Sequence

<dnaseqindica>1952..2253#1669..1808#1336..1406#1033..1233#677..949#ccccaaggccctggagcccgcactgcaactctacaaccaatacaagcctttcctcactagtgcgcctactggtatgctatccttcctgaattccttgtctgtctctgcctctctggagagaccatttgctacttctattactagtagtaattgattgatgaagcaaaatcttcagacaatatccccgcaagcacccgcaccttcagcgagatcctaagcgacctccagcggagcaaggtcagcattaaggactggagtctcactgatctcaccatcggcctctacctcatctacctcagccaagcttctgcaaaggatgctcaagccttcaagggtcttcatatctcctgcaacaacaaggctagccccccttctcttctcttccctatcacaatttcacaatttataatcttgctagacttctgtaactctcatttctcttaatgaaatgggagagctttgctctcctagttcaaaaaaaaacaatctataatcttgcttctttctcaacccatttatactatacaatacaattaaatgttcctttctttccactgtttatcatacactcttctaagttccaactaacactttctaggttcaacaactaatttatcaccttgagcttgcaagaggttgctataagggcaatgccactggccttgcacgccattctatgcttcgcaagaggaacgttctcaaattcgtcaaggactccagtattctcagacctggctattacattgccattgatccacgcactaaattggtcatccttgggattcgtgggactcacactgtttatgacctagttaccgatttgattgctctaagcgataagaaggtatcacctaaaggtttctcgacacactttggaacatatgaggccgcccgttggtaccttcgccatgagttgggacttatcagaaagtgtttggaaaagcataaggtgggaaactgactgtcttcaaatttgctccgcatcttttcttgggtgatatatatgcctgagttttacccttttcaaagcaggattacaagttgcgcctggtagggcactcccttggaggtgcttcagccgcgttgcttgctataatgctaaggaagaagtcaaaggaagagcttggatttagtcctgacgttatatcagctgttggatatggaaccccgccttgtgtctcaagagaaattgctcaaagttgtgcaagctatgtttcaactgttgtactgcaggttatgcttgaccctttctcggagtgacatcctatttatgatatctttgctgcatactagaatttttaagtgagctgacattttctgcccttttttttctaggatgatatcatccctagattaagtgcagcttcactggcaagattgcgagccgaaatactcaaaacagattggtaagcaatggcttttgttgaggttgcatttatagaaagaagcttgtgattgttctccttattgggataatttgacttcttgttgaacaattctttttacccactctgaatggcttaatcctgacatgtaacatagctttcagccgcacatttgtgacttgcactcgtagttgtgaaacatgagcaacatcatgacacagtgataataaaacactaaatggggaactatgtatacaattgtttaaatcatgttcttttgtagggtaagtgttttggaaaaagaagactggaagcatatagtggacattgtgactaatgctaagcttgtagtttcgtcaattcaagatgtggcgcgcaagcttgctgattatgctaaaattgtcacagtatcaactagttctggtaagccccttgcctttttaataattttgtaagttactattatttatttatttcaatcgtcagtttctgcaaaagtggaaaattgagagggtttggggggttagtattgtattgaatcgcattggtctttcttgtgttgttagatgccatcaaagatcaagatcgccccctgagcaccagtgaagtattgtcaccggatagtaaagaggatgtatttgtgccagaagatctgttccttcctgggactctgtattacctcaagagggacattgaggatataaacggtgtagaagatgagtcgtatacactctggagaggtgatgccggggagaattttcagaggatactgttatctggcaatctgatatccgatcacaaatgtgaaagcatatattacgccctgagggatgtgctcaagactctgccgccccaggaatcaggatgacaagtagaagttccttttcaagctttttgcaggataatctccatctattctgtagtttgtcatctcgatacaatagaggaaagcatatttttgttgctccttagttctcccatgggtaaaggcgaaagtctgccggctttgggggaaatagaagaatagagcttgttgtacagttttgtgtgtgtgtgtgtgtgtgtgtgtgtttgtaagggaaaaaacaagaataatagagaagaaatgcttaacact</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0571500, RefSeq:Os09g0571500